Conservation of cofitness between GFF2761 and GFF1473 in Sphingobium sp. HT1-2

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF2761 putative transcriptional regulatory protein, LysR family 1.0 GFF1473 NAD(P)H dehydrogenase (quinone), Type IV (EC 1.6.5.2) 0.78 16
Castellaniella sp019104865 MT123 0.30 ABCV34_RS08045 LysR substrate-binding domain-containing protein 0.26 ABCV34_RS15000 NAD(P)H:quinone oxidoreductase low > 48
Cupriavidus basilensis FW507-4G11 0.29 RR42_RS16410 LysR family transcriptional regulator 0.47 RR42_RS27375 NAD(P)H-quinone oxidoreductase low > 128
Pseudomonas sp. BP01 0.27 JOY50_RS07300 LysR family transcriptional regulator 0.32 JOY50_RS23855 wrbA NAD(P)H:quinone oxidoreductase low > 84
Serratia liquefaciens MT49 0.27 IAI46_10685 LysR family transcriptional regulator 0.55 IAI46_08995 NAD(P)H:quinone oxidoreductase low > 87
Paraburkholderia graminis OAS925 0.26 ABIE53_001883 DNA-binding transcriptional LysR family regulator 0.28 ABIE53_002923 NAD(P)H dehydrogenase (quinone) low > 113
Pseudomonas fluorescens FW300-N2C3 0.24 AO356_26100 LysR family transcriptional regulator 0.32 AO356_19015 NAD(P)H-quinone oxidoreductase low > 104
Pseudomonas fluorescens FW300-N2E2 0.24 Pf6N2E2_1093 Transcriptional regulatory protein 0.33 Pf6N2E2_5714 Flavoprotein WrbA low > 103
Azospirillum brasilense Sp245 0.24 AZOBR_RS27080 transcriptional regulator 0.68 AZOBR_RS21920 NAD(P)H quinone oxidoreductase low > 97
Azospirillum sp. SherDot2 0.23 MPMX19_06789 Octopine catabolism/uptake operon regulatory protein OccR 0.67 MPMX19_05003 NAD(P)H dehydrogenase (quinone) low > 112
Pseudomonas stutzeri RCH2 0.22 Psest_2120 Transcriptional regulator 0.62 Psest_2564 NAD(P)H:quinone oxidoreductase, type IV low > 67
Caulobacter crescentus NA1000 Δfur 0.21 CCNA_01693 LysR-family transcriptional regulator 0.84 CCNA_00833 NAD(P)H:quinone oxidoreductase low > 67
Caulobacter crescentus NA1000 0.21 CCNA_01693 LysR-family transcriptional regulator 0.84 CCNA_00833 NAD(P)H:quinone oxidoreductase low > 66
Rahnella sp. WP5 0.20 EX31_RS13280 LysR family transcriptional regulator 0.55 EX31_RS10720 NAD(P)H:quinone oxidoreductase low > 89
Erwinia tracheiphila HP pepo 2.2 0.20 IJEDHG_17030 LysR family transcriptional regulator 0.52 IJEDHG_20685 wrbA NAD(P)H:quinone oxidoreductase — —
Erwinia tracheiphila SCR3 0.20 LU632_RS06035 LysR family transcriptional regulator 0.52 LU632_RS10140 wrbA NAD(P)H:quinone oxidoreductase low > 73
Enterobacter sp. TBS_079 0.20 MPMX20_03706 Octopine catabolism/uptake operon regulatory protein OccR 0.54 MPMX20_01689 NAD(P)H dehydrogenase (quinone) low > 85
Agrobacterium fabrum C58 0.19 Atu3381 LysR family transcriptional regulator 0.69 Atu1728 TrpR binding protein WrbA low > 89
Pseudomonas putida KT2440 0.19 PP_4460 Transcriptional regulator, LysR family 0.32 PP_1644 NAD(P)H dehydrogenase (quinone) low > 96
Pantoea agglomerans CFBP13505 P0401 0.19 PagCFBP13505_RS17115 LysR family transcriptional regulator 0.51 PagCFBP13505_RS04780 NAD(P)H:quinone oxidoreductase low > 74
Pseudomonas sp. SVBP6 0.19 COO64_RS08710 LysR family transcriptional regulator 0.31 COO64_RS07380 wrbA NAD(P)H:quinone oxidoreductase low > 93
Pantoea sp. MT58 0.19 IAI47_03855 LysR family transcriptional regulator 0.51 IAI47_12550 NAD(P)H:quinone oxidoreductase low > 76
Escherichia coli ECOR27 0.19 NOLOHH_11825 lysR DNA-binding transcriptional regulator LysR 0.56 NOLOHH_21555 wrbA NAD(P)H:quinone oxidoreductase low > 76
Escherichia coli ECRC62 0.18 BNILDI_10305 lysR DNA-binding transcriptional regulator LysR 0.56 BNILDI_19720 wrbA NAD(P)H:quinone oxidoreductase low > 75
Klebsiella pneumoniae MKP103 0.18 KDGMDA_03940 LysR family transcriptional regulator 0.55 KDGMDA_18390 NAD(P)H:quinone oxidoreductase low > 95
Escherichia fergusonii Becca 0.18 EFB2_01044 Octopine catabolism/uptake operon regulatory protein OccR 0.56 EFB2_03076 NAD(P)H dehydrogenase (quinone) low > 86
Escherichia coli ECOR38 0.18 HEPCGN_19570 lysR DNA-binding transcriptional regulator LysR 0.56 HEPCGN_23485 wrbA NAD(P)H:quinone oxidoreductase low > 88
Escherichia coli Nissle 1917 0.18 ECOLIN_RS15935 DNA-binding transcriptional regulator LysR 0.56 ECOLIN_RS05235 NAD(P)H:quinone oxidoreductase — —
Escherichia coli BL21 0.18 ECD_02687 transcriptional activator of lysA; autorepressor 0.56 ECD_01007 NAD(P)H:quinone oxidoreductase low > 61
Escherichia coli BW25113 0.18 b2839 lysR DNA-binding transcriptional dual regulator (NCBI) 0.56 b1004 wrbA TrpR binding protein WrbA (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.18 OHPLBJKB_00890 Octopine catabolism/uptake operon regulatory protein OccR 0.56 OHPLBJKB_02663 NAD(P)H dehydrogenase (quinone) low > 74
Escherichia coli ECRC99 0.18 KEDOAH_08190 lysR DNA-binding transcriptional regulator LysR 0.55 KEDOAH_23090 wrbA NAD(P)H:quinone oxidoreductase — —
Escherichia coli ECRC98 0.18 JDDGAC_23605 lysR DNA-binding transcriptional regulator LysR 0.55 JDDGAC_08265 wrbA NAD(P)H:quinone oxidoreductase low > 87
Escherichia coli ECRC102 0.18 NIAGMN_17710 lysR DNA-binding transcriptional regulator LysR 0.49 NIAGMN_23195 wrbA NAD(P)H:quinone oxidoreductase low > 80
Escherichia coli ECRC100 0.18 OKFHMN_19940 lysR DNA-binding transcriptional regulator LysR 0.55 OKFHMN_04655 wrbA NAD(P)H:quinone oxidoreductase low > 79
Escherichia coli ECRC101 0.18 MCAODC_10465 lysR DNA-binding transcriptional regulator LysR 0.55 MCAODC_24040 wrbA NAD(P)H:quinone oxidoreductase low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.17 GFF1324 Transcriptional activator protein LysR 0.57 GFF3296 Flavoprotein WrbA low > 78
Enterobacter asburiae PDN3 0.17 EX28DRAFT_2917 Transcriptional regulator 0.54 EX28DRAFT_1923 NAD(P)H:quinone oxidoreductase, type IV low > 76
Klebsiella michiganensis M5al 0.17 BWI76_RS23365 LysR family transcriptional regulator 0.56 BWI76_RS10740 NAD(P)H:quinone oxidoreductase low > 92

Not shown: 6 genomes with orthologs for GFF2761 only; 51 genomes with orthologs for GFF1473 only