Conservation of cofitness between GFF3670 and GFF1199 in Sphingobium sp. HT1-2

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sphingobium sp. HT1-2 1.0 GFF3670 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) 1.0 GFF1199 Delta 1-pyrroline-2-carboxylate reductase (NAD(P)H) (EC 1.5.1.49) 0.73 14
Dinoroseobacter shibae DFL-12 0.29 Dshi_3575 3-deoxy-D-manno-octulosonate cytidylyltransferase (RefSeq) 0.26 Dshi_2039 Malate/L-lactate dehydrogenase (RefSeq) — —
Xanthobacter sp. DMC5 0.21 GFF1653 3-deoxy-manno-octulosonate cytidylyltransferase 0.26 GFF34 (2R)-3-sulfolactate dehydrogenase (NADP(+)) — —
Pseudomonas aeruginosa PUPa3 0.21 DQ20_RS33505 kdsB;go_function=3-deoxy-manno-octulosonate 3-deoxy-manno-octulosonate cytidylyltransferase 0.67 DQ20_RS46625 lhpD;inference=COORDINATES bifunctional delta(1)-pyrroline-2-carboxylate/delta(1)-piperideine-2-carboxylate reductase — —
Pseudomonas aeruginosa MRSN321 0.21 DY961_RS02075 kdsB;go_function=3-deoxy-manno-octulosonate 3-deoxy-manno-octulosonate cytidylyltransferase 0.67 DY961_RS06160 lhpD;inference=COORDINATES bifunctional delta(1)-pyrroline-2-carboxylate/delta(1)-piperideine-2-carboxylate reductase — —
Pseudomonas aeruginosa PA14 0.21 IKLFDK_15155 3-deoxy-manno-octulosonate cytidylyltransferase 0.67 IKLFDK_05925 Delta(1)-pyrroline-2-carboxylate/Delta(1)-piperideine-2-carboxylate reductase — —
Pedobacter sp. GW460-11-11-14-LB5 0.21 CA265_RS07450 3-deoxy-D-manno-octulosonate cytidylyltransferase 0.15 CA265_RS15615 malate dehydrogenase low > 88
Pseudomonas sp. RS175 0.21 PFR28_03026 3-deoxy-manno-octulosonate cytidylyltransferase 0.33 PFR28_01661 Delta(1)-pyrroline-2-carboxylate/Delta(1)- piperideine-2-carboxylate reductase — —
Klebsiella pneumoniae MKP103 0.21 KDGMDA_18015 3-deoxy-manno-octulosonate cytidylyltransferase 0.60 KDGMDA_12150 oxidoreductase — —
Escherichia coli ECOR38 0.20 HEPCGN_18150 kpsU 3-deoxy-manno-octulosonate cytidylyltransferase 0.15 HEPCGN_06510 allD ureidoglycolate dehydrogenase low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_02749 3-deoxy-manno-octulosonate cytidylyltransferase 0.15 OHPLBJKB_03164 Ureidoglycolate dehydrogenase (NAD(+)) — —
Escherichia coli BW25113 0.20 b0918 kdsB 3-deoxy-manno-octulosonate cytidylyltransferase (NCBI) 0.15 b0517 allD ureidoglycolate dehydrogenase (NCBI) — —
Escherichia coli BL21 0.20 ECD_00922 3-deoxy-manno-octulosonate cytidylyltransferase 0.16 ECD_00467 ureidoglycolate dehydrogenase — —
Escherichia coli ECRC99 0.20 KEDOAH_22300 kdsB 3-deoxy-manno-octulosonate cytidylyltransferase 0.15 KEDOAH_21640 hcxB hydroxycarboxylate dehydrogenase HcXB — —
Escherichia coli ECRC98 0.20 JDDGAC_09045 kdsB 3-deoxy-manno-octulosonate cytidylyltransferase 0.15 JDDGAC_11515 allD ureidoglycolate dehydrogenase — —
Escherichia coli ECRC100 0.20 OKFHMN_05435 kdsB 3-deoxy-manno-octulosonate cytidylyltransferase 0.15 OKFHMN_07865 allD ureidoglycolate dehydrogenase — —
Escherichia coli ECRC102 0.20 NIAGMN_03155 kdsB 3-deoxy-manno-octulosonate cytidylyltransferase 0.15 NIAGMN_05920 allD ureidoglycolate dehydrogenase — —
Escherichia coli ECRC101 0.20 MCAODC_24825 kdsB 3-deoxy-manno-octulosonate cytidylyltransferase 0.15 MCAODC_27085 allD ureidoglycolate dehydrogenase — —
Rhizobium sp. OAE497 0.20 ABIE40_RS00240 3-deoxy-manno-octulosonate cytidylyltransferase 0.50 ABIE40_RS21905 Ldh family oxidoreductase — —
Escherichia coli ECOR27 0.19 NOLOHH_21995 kdsB 3-deoxy-manno-octulosonate cytidylyltransferase 0.15 NOLOHH_00855 allD ureidoglycolate dehydrogenase — —
Azospirillum brasilense Sp245 0.19 AZOBR_RS03860 3-deoxy-manno-octulosonate cytidylyltransferase 0.30 AZOBR_RS31690 lactate dehydrogenase — —
Escherichia coli ECRC62 0.19 BNILDI_20250 kdsB 3-deoxy-manno-octulosonate cytidylyltransferase 0.16 BNILDI_22285 allD ureidoglycolate dehydrogenase — —
Pseudomonas fluorescens FW300-N1B4 0.19 Pf1N1B4_468 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) 0.64 Pf1N1B4_5979 Ureidoglycolate/malate/sulfolactate dehydrogenase family (EC 1.1.1.-) — —
Pseudomonas simiae WCS417 0.19 PS417_16325 3-deoxy-manno-octulosonate cytidylyltransferase 0.34 PS417_12515 lactate dehydrogenase — —
Pseudomonas putida KT2440 0.19 PP_1902 3-deoxy-manno-octulosonate cytidylyltransferase 0.34 PP_3591 Delta 1-piperideine-2-carboxylate reductase — —
Pseudomonas sp. DMC3 0.19 GFF4773 3-deoxy-manno-octulosonate cytidylyltransferase 0.33 GFF3464 Delta(1)-pyrroline-2-carboxylate/Delta(1)-piperid eine-2-carboxylate reductase — —
Pseudomonas fluorescens FW300-N2E3 0.19 AO353_01440 3-deoxy-manno-octulosonate cytidylyltransferase 0.34 AO353_23830 lactate dehydrogenase — —
Agrobacterium fabrum C58 0.19 Atu0100 3-deoxy-manno-octulosonate cytidylyltransferase 0.49 Atu4676 malate dehydrogenase — —
Pseudomonas syringae pv. syringae B728a 0.19 Psyr_1636 3-deoxy-D-manno-octulosonate cytidylyltransferase 0.34 Psyr_2143 delta1-piperideine 2-carboxylate reductase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.19 Psyr_1636 3-deoxy-D-manno-octulosonate cytidylyltransferase 0.34 Psyr_2143 delta1-piperideine 2-carboxylate reductase — —
Pseudomonas fluorescens GW456-L13 0.19 PfGW456L13_2088 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) 0.33 PfGW456L13_2974 Delta 1-piperideine-2-carboxylate reductase (EC 1.5.1.21) / Delta 1-pyrroline-2-carboxylate reductase (EC 1.5.1.1) — —
Sinorhizobium meliloti 1021 0.19 SMc02898 3-deoxy-manno-octulosonate cytidylyltransferase 0.50 SM_b20261 malate dehydrogenase — —
Pectobacterium carotovorum WPP14 0.19 HER17_RS12085 3-deoxy-manno-octulosonate cytidylyltransferase 0.14 HER17_RS14120 malate/lactate/ureidoglycolate dehydrogenase — —
Serratia liquefaciens MT49 0.19 IAI46_08700 3-deoxy-manno-octulosonate cytidylyltransferase 0.60 IAI46_09135 Ldh family oxidoreductase — —
Pseudomonas lactucae CFBP13502 0.19 GEMAOFIL_03592 3-deoxy-manno-octulosonate cytidylyltransferase 0.33 GEMAOFIL_02749 Delta(1)-pyrroline-2-carboxylate/Delta(1)- piperideine-2-carboxylate reductase — —
Dickeya dianthicola ME23 0.19 DZA65_RS10195 3-deoxy-manno-octulosonate cytidylyltransferase 0.15 DZA65_RS07905 malate/lactate/ureidoglycolate dehydrogenase — —
Bosea sp. OAE506 0.19 ABIE41_RS23950 3-deoxy-manno-octulosonate cytidylyltransferase 0.25 ABIE41_RS17160 Ldh family oxidoreductase — —
Pseudomonas fluorescens SBW25 0.18 PFLU_RS18375 3-deoxy-manno-octulosonate cytidylyltransferase 0.33 PFLU_RS13200 Ldh family oxidoreductase — —
Pseudomonas fluorescens SBW25-INTG 0.18 PFLU_RS18375 3-deoxy-manno-octulosonate cytidylyltransferase 0.33 PFLU_RS13200 Ldh family oxidoreductase — —
Pseudomonas fluorescens FW300-N2E2 0.18 Pf6N2E2_5935 3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) 0.34 Pf6N2E2_1089 Delta 1-piperideine-2-carboxylate reductase (EC 1.5.1.21) / Delta 1-pyrroline-2-carboxylate reductase (EC 1.5.1.1) — —
Pseudomonas sp. S08-1 0.18 OH686_22070 3-deoxy-D-manno-octulosonate cytidylyltransferase 0.59 OH686_13105 Delta 1-pyrroline-2-carboxylate reductase (NAD(P)H) — —
Pseudomonas fluorescens FW300-N2C3 0.18 AO356_20085 3-deoxy-manno-octulosonate cytidylyltransferase 0.34 AO356_26080 lactate dehydrogenase — —
Dickeya dianthicola 67-19 0.18 HGI48_RS09865 3-deoxy-manno-octulosonate cytidylyltransferase 0.15 HGI48_RS07395 malate/lactate/ureidoglycolate dehydrogenase — —
Dickeya dadantii 3937 0.18 DDA3937_RS09855 3-deoxy-manno-octulosonate cytidylyltransferase 0.15 DDA3937_RS07530 malate/lactate/ureidoglycolate dehydrogenase — —
Pseudomonas sp. SVBP6 0.18 COO64_RS05865 kdsB 3-deoxy-manno-octulosonate cytidylyltransferase 0.58 COO64_RS22925 Ldh family oxidoreductase — —
Cupriavidus basilensis FW507-4G11 0.18 RR42_RS03450 3-deoxy-manno-octulosonate cytidylyltransferase 0.25 RR42_RS02230 sulfolactate dehydrogenase — —
Pseudomonas orientalis W4I3 0.18 QF045_RS18080 3-deoxy-manno-octulosonate cytidylyltransferase 0.31 QF045_RS17400 Ldh family oxidoreductase — —
Variovorax sp. OAS795 0.17 ABID97_RS16970 3-deoxy-manno-octulosonate cytidylyltransferase 0.15 ABID97_RS05795 malate/lactate/ureidoglycolate dehydrogenase — —
Erwinia tracheiphila HP pepo 2.2 0.17 IJEDHG_20350 kdsB 3-deoxy-manno-octulosonate cytidylyltransferase 0.11 IJEDHG_04475 yiaK 3-dehydro-L-gulonate 2-dehydrogenase — —
Desulfovibrio vulgaris Miyazaki F 0.17 DvMF_2371 3-deoxy-manno-octulosonate cytidylyltransferase (RefSeq) 0.27 DvMF_1995 Malate/L-lactate dehydrogenase (RefSeq) — —
Paraburkholderia graminis OAS925 0.16 ABIE53_003347 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) 0.19 ABIE53_006110 ureidoglycolate dehydrogenase (NAD+) — —
Paraburkholderia sabiae LMG 24235 0.15 QEN71_RS02820 3-deoxy-manno-octulosonate cytidylyltransferase 0.18 QEN71_RS36375 Ldh family oxidoreductase — —

Not shown: 64 genomes with orthologs for GFF3670 only; 4 genomes with orthologs for GFF1199 only