Conservation of cofitness between PS417_12555 and PS417_05595 in Pseudomonas simiae WCS417

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_12555 phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) (from data) 1.0 PS417_05595 ornithine carbamoyltransferase 0.26 15
Pseudomonas fluorescens SBW25 0.95 PFLU_RS13240 D-glycerate dehydrogenase 0.95 PFLU_RS05680 ornithine carbamoyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.95 PFLU_RS13240 D-glycerate dehydrogenase 0.95 PFLU_RS05680 ornithine carbamoyltransferase — —
Pseudomonas fluorescens FW300-N1B4 0.85 Pf1N1B4_4763 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) 0.93 Pf1N1B4_762 Ornithine carbamoyltransferase (EC 2.1.3.3) low > 87
Pseudomonas fluorescens FW300-N2E3 0.85 AO353_26885 phosphogluconate 2-dehydrogenase KguD (EC 1.1.1.43) (from data) 0.93 AO353_04155 ornithine carbamoyltransferase 0.20 64
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_2948 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) 0.93 PfGW456L13_1739 Ornithine carbamoyltransferase (EC 2.1.3.3) low > 87
Pseudomonas sp. RS175 0.80 PFR28_01596 Glyoxylate/hydroxypyruvate reductase B 0.88 PFR28_03363 Ornithine carbamoyltransferase 1, anabolic low > 88
Pseudomonas fluorescens FW300-N2E2 0.79 Pf6N2E2_627 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) 0.90 Pf6N2E2_5579 Ornithine carbamoyltransferase (EC 2.1.3.3) low > 103
Pseudomonas fluorescens FW300-N2C3 0.76 AO356_24675 bifunctional glyoxylate/hydroxypyruvate reductase B 0.89 AO356_18275 ornithine carbamoyltransferase low > 104
Pseudomonas putida KT2440 0.68 PP_3376 putative phosphonate dehydrogenase 0.86 PP_1079 Ornithine carbamoyltransferase low > 96
Herbaspirillum seropedicae SmR1 0.56 HSERO_RS07550 bifunctional glyoxylate/hydroxypyruvate reductase B 0.51 HSERO_RS07185 Ornithine carbamoyltransferase (EC 2.1.3.3) (from data) — —
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS07265 D-glycerate dehydrogenase 0.52 QEN71_RS02785 ornithine carbamoyltransferase low > 153
Ralstonia sp. UNC404CL21Col 0.50 ABZR87_RS09030 NAD(P)-dependent oxidoreductase 0.52 ABZR87_RS00840 ornithine carbamoyltransferase — —
Castellaniella sp019104865 MT123 0.47 ABCV34_RS08615 D-glycerate dehydrogenase 0.52 ABCV34_RS05380 ornithine carbamoyltransferase low > 48
Variovorax sp. SCN45 0.46 GFF2715 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) 0.52 GFF3926 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS09465 bifunctional glyoxylate/hydroxypyruvate reductase B 0.52 RR42_RS17175 ornithine carbamoyltransferase — —
Variovorax sp. OAS795 0.43 ABID97_RS20025 D-glycerate dehydrogenase 0.54 ABID97_RS08630 ornithine carbamoyltransferase — —
Ralstonia solanacearum GMI1000 0.41 RS_RS21645 D-glycerate dehydrogenase 0.52 RS_RS12805 ornithine carbamoyltransferase — —
Ralstonia solanacearum PSI07 0.41 RPSI07_RS02805 D-glycerate dehydrogenase 0.52 RPSI07_RS12115 ornithine carbamoyltransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF3835 Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) 0.51 GFF3419 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Acidovorax sp. GW101-3H11 0.38 Ac3H11_2599 Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) (EC 1.1.1.-) 0.52 Ac3H11_1333 Ornithine carbamoyltransferase (EC 2.1.3.3) — —
Ralstonia solanacearum UW163 0.33 UW163_RS11805 D-glycerate dehydrogenase 0.52 UW163_RS08440 ornithine carbamoyltransferase — —
Ralstonia solanacearum IBSBF1503 0.33 RALBFv3_RS14340 D-glycerate dehydrogenase 0.52 RALBFv3_RS05185 ornithine carbamoyltransferase — —
Rhizobium sp. OAE497 0.32 ABIE40_RS14685 D-glycerate dehydrogenase 0.47 ABIE40_RS02325 ornithine carbamoyltransferase low > 107
Brevundimonas sp. GW460-12-10-14-LB2 0.31 A4249_RS12365 D-glycerate dehydrogenase 0.52 A4249_RS11920 ornithine carbamoyltransferase low > 48
Parabacteroides merdae CL09T00C40 0.30 HMPREF1078_RS06255 2-hydroxyacid dehydrogenase family protein 0.14 HMPREF1078_RS10660 acetylornithine carbamoyltransferase low > 61
Dinoroseobacter shibae DFL-12 0.29 Dshi_2643 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding (RefSeq) 0.46 Dshi_0796 ornithine carbamoyltransferase (RefSeq) low > 64
Rhodospirillum rubrum S1H 0.27 Rru_A1815 Glycolate reductase (NCBI) 0.50 Rru_A3276 Ornithine carbamoyltransferase (NCBI) low > 58

Not shown: 24 genomes with orthologs for PS417_12555 only; 41 genomes with orthologs for PS417_05595 only