Conservation of cofitness between EX31_RS14255 and EX31_RS12530 in Rahnella sp. WP5

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rahnella sp. WP5 1.0 EX31_RS14255 ribonuclease E activity regulator RraA 1.0 EX31_RS12530 divisome-associated lipoprotein YraP 0.47 16
Serratia liquefaciens MT49 0.95 IAI46_24585 ribonuclease E activity regulator RraA 0.83 IAI46_22315 divisome-associated lipoprotein YraP low > 86
Pectobacterium carotovorum WPP14 0.93 HER17_RS00840 ribonuclease E activity regulator RraA 0.77 HER17_RS19880 divisome-associated lipoprotein YraP low > 75
Erwinia tracheiphila SCR3 0.93 LU632_RS19685 rraA ribonuclease E activity regulator RraA 0.75 LU632_RS02210 yraP divisome-associated lipoprotein YraP low > 74
Escherichia fergusonii Becca 0.93 EFB2_04689 Regulator of ribonuclease activity A 0.71 EFB2_00673 Osmotically-inducible protein Y low > 86
Escherichia coli ECRC62 0.93 BNILDI_05635 rraA ribonuclease E activity regulator RraA 0.71 BNILDI_01515 diaA DnaA initiator-associating protein DiaA low > 75
Escherichia coli BW25113 0.93 b3929 rraA ribonuclease activity regulator protein RraA (NCBI) 0.71 b3150 yraP hypothetical protein (NCBI) low > 76
Escherichia coli Nissle 1917 0.93 ECOLIN_RS22625 ribonuclease E activity regulator RraA 0.71 ECOLIN_RS18105 division/outer membrane stress-associated lipid-binding lipoprotein low > 55
Escherichia coli BL21 0.93 ECD_03814 ribonuclease E (RNase E) inhibitor protein 0.71 ECD_03017 outer membrane lipoprotein low > 61
Escherichia coli ECOR38 0.93 HEPCGN_12395 rraA ribonuclease E activity regulator RraA 0.71 HEPCGN_17090 dolP division/outer membrane stress-associated lipid-binding lipoprotein low > 87
Escherichia coli ECRC102 0.93 NIAGMN_11505 rraA ribonuclease E activity regulator RraA 0.71 NIAGMN_15975 diaA DnaA initiator-associating protein DiaA — —
Escherichia coli ECRC98 0.93 JDDGAC_17375 rraA ribonuclease E activity regulator RraA 0.71 JDDGAC_21840 diaA DnaA initiator-associating protein DiaA low > 86
Escherichia coli ECOR27 0.93 NOLOHH_05895 rraA ribonuclease E activity regulator RraA 0.70 NOLOHH_10015 dolP division/outer membrane stress-associated lipid-binding lipoprotein low > 75
Escherichia coli ECRC99 0.93 KEDOAH_14410 rraA ribonuclease E activity regulator RraA 0.71 KEDOAH_09935 diaA DnaA initiator-associating protein DiaA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.93 OHPLBJKB_04122 Regulator of ribonuclease activity A 0.71 OHPLBJKB_00550 Osmotically-inducible protein Y low > 73
Escherichia coli ECRC101 0.93 MCAODC_04250 rraA ribonuclease E activity regulator RraA 0.71 MCAODC_08735 diaA DnaA initiator-associating protein DiaA low > 87
Escherichia coli ECRC100 0.93 OKFHMN_13750 rraA ribonuclease E activity regulator RraA 0.71 OKFHMN_18215 diaA DnaA initiator-associating protein DiaA low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF2311 Ribonuclease E inhibitor RraA 0.72 GFF1517 21 kDa hemolysin precursor low > 78
Enterobacter sp. TBS_079 0.91 MPMX20_04540 Regulator of ribonuclease activity A 0.74 MPMX20_04054 Osmotically-inducible protein Y low > 85
Klebsiella michiganensis M5al 0.90 BWI76_RS00740 ribonuclease E activity regulator RraA 0.67 BWI76_RS24930 osmotically-inducible protein OsmY low > 92
Enterobacter asburiae PDN3 0.90 EX28DRAFT_4402 regulator of ribonuclease activity A 0.73 EX28DRAFT_3199 Predicted periplasmic or secreted lipoprotein low > 76
Dickeya dianthicola 67-19 0.86 HGI48_RS20470 ribonuclease E activity regulator RraA 0.77 HGI48_RS01590 divisome-associated lipoprotein YraP low > 71
Dickeya dadantii 3937 0.85 DDA3937_RS00905 ribonuclease E activity regulator RraA 0.77 DDA3937_RS01695 divisome-associated lipoprotein YraP low > 74
Dickeya dianthicola ME23 0.85 DZA65_RS21515 ribonuclease E activity regulator RraA 0.77 DZA65_RS01665 divisome-associated lipoprotein YraP — —
Pantoea sp. MT58 0.82 IAI47_00840 ribonuclease E activity regulator RraA 0.71 IAI47_02830 divisome-associated lipoprotein YraP low > 76
Shewanella oneidensis MR-1 0.73 SO4197 menG-2 S-adenosylmethionine:2-demethylmenaquinone methyltransferase (NCBI ptt file) 0.37 SO0297 lipoprotein, putative (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.72 CSW01_13500 ribonuclease E activity regulator RraA 0.31 CSW01_03070 hemolysin low > 62
Shewanella sp. ANA-3 0.72 Shewana3_3723 ribonuclease activity regulator protein RraA (RefSeq) 0.37 Shewana3_3883 transport-associated (RefSeq) low > 73
Shewanella amazonensis SB2B 0.71 Sama_3200 ribonuclease activity regulator protein RraA (RefSeq) 0.36 Sama_3357 putative lipoprotein (RefSeq) low > 62
Shewanella loihica PV-4 0.70 Shew_3370 ribonuclease activity regulator protein RraA (RefSeq) 0.34 Shew_0224 transport-associated (RefSeq) — —
Alteromonas macleodii MIT1002 0.66 MIT1002_00164 Regulator of ribonuclease activity A 0.30 MIT1002_03118 Osmotically-inducible protein Y precursor low > 70
Pseudomonas stutzeri RCH2 0.58 Psest_2315 RraA famliy 0.35 Psest_3274 Predicted periplasmic or secreted lipoprotein — —
Pseudomonas putida KT2440 0.57 PP_2084 Putative regulator of ribonuclease activity 0.37 PP_1322 putative Lipoprotein low > 96
Pseudomonas fluorescens SBW25-INTG 0.56 PFLU_RS22620 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 0.30 PFLU_RS04635 BON domain-containing protein low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_2092 Protein of unknown function 1935 0.34 Psyr_4116 Transport-associated protein low > 86
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_2092 Protein of unknown function 1935 0.34 Psyr_4116 Transport-associated protein low > 86
Pseudomonas simiae WCS417 0.56 PS417_21010 ribonuclease activity regulator protein RraA 0.30 PS417_04570 phospholipid-binding protein — —
Pseudomonas fluorescens SBW25 0.56 PFLU_RS22620 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 0.30 PFLU_RS04635 BON domain-containing protein low > 109
Dechlorosoma suillum PS 0.43 Dsui_0010 RraA family protein 0.26 Dsui_0099 putative periplasmic or secreted lipoprotein low > 51
Herbaspirillum seropedicae SmR1 0.41 HSERO_RS10555 ribonuclease 0.28 HSERO_RS23365 transporter low > 78
Azospirillum sp. SherDot2 0.39 MPMX19_04842 Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 0.22 MPMX19_04430 hypothetical protein low > 112

Not shown: 23 genomes with orthologs for EX31_RS14255 only; 2 genomes with orthologs for EX31_RS12530 only