Conservation of cofitness between EX28DRAFT_1764 and EX28DRAFT_4287 in Enterobacter asburiae PDN3

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Enterobacter asburiae PDN3 1.0 EX28DRAFT_1764 DNA topoisomerase III, bacteria and conjugative plasmid 1.0 EX28DRAFT_4287 ABC-type branched-chain amino acid transport systems, ATPase component 0.55 7
Enterobacter sp. TBS_079 0.96 MPMX20_01853 DNA topoisomerase 3 0.98 MPMX20_04331 Lipopolysaccharide export system ATP-binding protein LptB low > 85
Escherichia coli BW25113 0.93 b1763 topB DNA topoisomerase III (NCBI) 0.95 b3455 livG leucine/isoleucine/valine transporter subunit (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.93 OHPLBJKB_01969 DNA topoisomerase 3 0.95 OHPLBJKB_00248 Lipopolysaccharide export system ATP-binding protein LptB low > 73
Escherichia coli BL21 0.93 ECD_01732 DNA topoisomerase III 0.95 ECD_03304 branched-chain amino acid ABC transporter ATPase low > 61
Escherichia coli ECOR27 0.93 NOLOHH_17340 topB DNA topoisomerase III 0.95 NOLOHH_08550 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG low > 75
Escherichia coli ECRC62 0.93 BNILDI_16125 topB DNA topoisomerase III 0.95 BNILDI_02955 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG low > 75
Escherichia coli ECRC100 0.93 OKFHMN_26830 topB DNA topoisomerase III 0.95 OKFHMN_16755 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG low > 80
Escherichia coli ECRC101 0.93 MCAODC_18580 topB DNA topoisomerase III 0.95 MCAODC_07285 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG low > 87
Escherichia coli ECRC98 0.93 JDDGAC_01405 topB DNA topoisomerase III 0.95 JDDGAC_20385 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG low > 86
Escherichia coli ECRC99 0.93 KEDOAH_01280 topB DNA topoisomerase III 0.95 KEDOAH_11385 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG — —
Escherichia coli ECRC102 0.93 NIAGMN_01235 topB DNA topoisomerase III 0.95 NIAGMN_14525 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG — —
Escherichia coli Nissle 1917 0.92 ECOLIN_RS09830 DNA topoisomerase III 0.95 ECOLIN_RS19760 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG — —
Escherichia coli ECOR38 0.92 HEPCGN_05200 topB DNA topoisomerase III 0.95 HEPCGN_15575 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG low > 87
Escherichia fergusonii Becca 0.92 EFB2_02231 DNA topoisomerase 3 0.95 EFB2_00367 Lipopolysaccharide export system ATP-binding protein LptB low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF3486 DNA topoisomerase III (EC 5.99.1.2) 0.95 GFF551 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) low > 78
Klebsiella michiganensis M5al 0.90 BWI76_RS11605 DNA topoisomerase III 0.95 BWI76_RS26335 ABC transporter ATP-binding protein low > 92
Serratia liquefaciens MT49 0.84 IAI46_14305 DNA topoisomerase III 0.83 IAI46_00975 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG low > 86
Rahnella sp. WP5 0.83 EX31_RS06315 DNA topoisomerase III 0.85 EX31_RS14790 ABC transporter ATP-binding protein low > 89
Pectobacterium carotovorum WPP14 0.83 HER17_RS11095 DNA topoisomerase III 0.86 HER17_RS00510 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG low > 75
Dickeya dadantii 3937 0.82 DDA3937_RS10300 DNA topoisomerase III 0.86 DDA3937_RS00675 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG low > 74
Dickeya dianthicola 67-19 0.81 HGI48_RS10310 DNA topoisomerase III 0.85 HGI48_RS20715 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG low > 71
Erwinia tracheiphila SCR3 0.79 LU632_RS12960 DNA topoisomerase III 0.84 LU632_RS19240 livG high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG low > 74
Pantoea sp. MT58 0.79 IAI47_08980 DNA topoisomerase III 0.87 IAI47_01580 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG low > 76
Marinobacter adhaerens HP15 0.45 HP15_1186 DNA topoisomerase III 0.70 HP15_3058 leucine/isoleucine/valine transporter ATP-binding subunit low > 73
Pseudomonas putida KT2440 0.34 PP_4019 DNA topoisomerase III 0.73 PP_1138 branched chain amino acid transporter - ATP binding subunit low > 96
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_00120 DNA topoisomerase III 0.71 AO356_05335 ABC transporter ATP-binding protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_972 DNA topoisomerase III (EC 5.99.1.2) in PFGI-1-like cluster 0.71 Pf6N2E2_2925 ABC transporter for L-leucine/L-isoleucine/L-phenylalanine/D-alanine, ATPase component 1 LivG (from data) low > 103
Pseudomonas syringae pv. syringae B728a 0.33 Psyr_1473 DNA topoisomerase III 0.70 Psyr_3848 L-valine ABC transporter ATP-binding protein / L-isoleucine ABC transporter ATP-binding protein / L-leucine ABC transporter ATP-binding protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.33 Psyr_1473 DNA topoisomerase III 0.70 Psyr_3848 L-valine ABC transporter ATP-binding protein / L-isoleucine ABC transporter ATP-binding protein / L-leucine ABC transporter ATP-binding protein low > 86
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS09715 DNA topoisomerase III 0.70 PFLU_RS06630 ABC transporter ATP-binding protein low > 109
Pseudomonas fluorescens SBW25 0.33 PFLU_RS09715 DNA topoisomerase III 0.70 PFLU_RS06630 ABC transporter ATP-binding protein low > 109
Pseudomonas stutzeri RCH2 0.33 Psest_1383 DNA topoisomerase III, bacteria and conjugative plasmid 0.72 Psest_1309 ABC-type branched-chain amino acid transport systems, ATPase component low > 67
Pseudomonas simiae WCS417 0.32 PS417_10550 DNA topoisomerase III 0.70 PS417_06600 leucine/isoleucine/valine transporter ATP-binding subunit low > 88
Pseudomonas fluorescens FW300-N2E3 0.32 AO353_26780 DNA topoisomerase III 0.72 AO353_17110 ABC transporter ATP-binding protein low > 101
Pseudomonas sp. RS175 0.32 PFR28_01342 DNA topoisomerase 3 0.70 PFR28_00537 Lipopolysaccharide export system ATP-binding protein LptB low > 88
Pseudomonas fluorescens FW300-N1B4 0.32 Pf1N1B4_4446 DNA topoisomerase III (EC 5.99.1.2) 0.70 Pf1N1B4_3215 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) — —
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_3568 DNA topoisomerase III (EC 5.99.1.2) 0.70 PfGW456L13_4610 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) low > 87
Cupriavidus basilensis FW507-4G11 0.29 RR42_RS24470 hypothetical protein 0.64 RR42_RS14410 leucine/isoleucine/valine transporter ATP-binding subunit low > 128
Azospirillum brasilense Sp245 0.16 AZOBR_RS10830 DNA topoisomerase III 0.52 AZOBR_RS08245 L-proline and D-alanine ABC transporter, ATPase component 1 (from data) low > 97

Not shown: 15 genomes with orthologs for EX28DRAFT_1764 only; 13 genomes with orthologs for EX28DRAFT_4287 only