Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Escherichia fergusonii Becca | 1.0 | EFB2_01128 | | putative glucarate transporter | 1.0 | EFB2_01062 | | RecBCD enzyme subunit RecC | 0.56 | 10 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_00942 | | putative glucarate transporter | 0.99 | OHPLBJKB_00908 | | RecBCD enzyme subunit RecC | low | > 73 |
Escherichia coli ECOR27 | 1.00 | NOLOHH_12100 | gudP | galactarate/glucarate/glycerate transporter GudP | 0.99 | NOLOHH_11925 | recC | exodeoxyribonuclease V subunit gamma | — | — |
Escherichia coli BL21 | 1.00 | ECD_02634 | | putative D-glucarate transporter | 0.99 | ECD_02670 | | exonuclease V (RecBCD complex), gamma chain | low | > 61 |
Escherichia coli ECRC62 | 1.00 | BNILDI_10605 | gudP | galactarate/glucarate/glycerate transporter GudP | 0.99 | BNILDI_10405 | recC | exodeoxyribonuclease V subunit gamma | low | > 75 |
Escherichia coli ECOR38 | 1.00 | HEPCGN_19475 | gudP | galactarate/glucarate/glycerate transporter GudP | 0.99 | HEPCGN_19295 | recC | exodeoxyribonuclease V subunit gamma | low | > 87 |
Escherichia coli Nissle 1917 | 1.00 | ECOLIN_RS15540 | | galactarate/glucarate/glycerate transporter GudP | 0.99 | ECOLIN_RS15840 | | exodeoxyribonuclease V subunit gamma | low | > 55 |
Escherichia coli BW25113 | 1.00 | b2789 | gudP | predicted D-glucarate transporter (NCBI) | 0.99 | b2822 | recC | exonuclease V (RecBCD complex), gamma chain (NCBI) | low | > 76 |
Escherichia coli ECRC100 | 1.00 | OKFHMN_20220 | gudP | galactarate/glucarate/glycerate transporter GudP | 0.99 | OKFHMN_20040 | recC | exodeoxyribonuclease V subunit gamma | — | — |
Escherichia coli ECRC102 | 1.00 | NIAGMN_17990 | gudP | galactarate/glucarate/glycerate transporter GudP | 0.99 | NIAGMN_17810 | recC | exodeoxyribonuclease V subunit gamma | — | — |
Escherichia coli ECRC101 | 1.00 | MCAODC_10745 | gudP | galactarate/glucarate/glycerate transporter GudP | 0.99 | MCAODC_10565 | recC | exodeoxyribonuclease V subunit gamma | — | — |
Escherichia coli ECRC98 | 1.00 | JDDGAC_23885 | gudP | galactarate/glucarate/glycerate transporter GudP | 0.99 | JDDGAC_23705 | recC | exodeoxyribonuclease V subunit gamma | — | — |
Escherichia coli ECRC99 | 1.00 | KEDOAH_07910 | gudP | galactarate/glucarate/glycerate transporter GudP | 0.99 | KEDOAH_08090 | recC | exodeoxyribonuclease V subunit gamma | — | — |
Klebsiella michiganensis M5al | 0.98 | BWI76_RS22835 | | MFS transporter | 0.80 | BWI76_RS23240 | | exonuclease V subunit gamma | low | > 92 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.96 | GFF4843 | | D-glucarate permease | 0.89 | GFF1303 | | Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) | low | > 78 |
Enterobacter asburiae PDN3 | 0.94 | EX28DRAFT_2870 | | D-galactonate transporter | 0.79 | EX28DRAFT_2897 | | DNA helicase/exodeoxyribonuclease V, gamma subunit (EC 3.1.11.5) | — | — |
Enterobacter sp. TBS_079 | 0.93 | MPMX20_03659 | | putative glucarate transporter | 0.78 | MPMX20_03685 | | RecBCD enzyme subunit RecC | low | > 85 |
Rahnella sp. WP5 | 0.87 | EX31_RS03160 | | MFS transporter | 0.26 | EX31_RS20740 | | exodeoxyribonuclease V subunit gamma | — | — |
Erwinia tracheiphila SCR3 | 0.85 | LU632_RS06310 | | MFS transporter | 0.62 | LU632_RS06180 | recC | exodeoxyribonuclease V subunit gamma | — | — |
Pectobacterium carotovorum WPP14 | 0.84 | HER17_RS04075 | | MFS transporter | 0.61 | HER17_RS16535 | | exodeoxyribonuclease V subunit gamma | low | > 75 |
Pantoea sp. MT58 | 0.83 | IAI47_04080 | | MFS transporter | 0.63 | IAI47_03955 | | exodeoxyribonuclease V subunit gamma | — | — |
Dickeya dadantii 3937 | 0.83 | DDA3937_RS17055 | | MFS transporter | 0.25 | DDA3937_RS11085 | | exodeoxyribonuclease V subunit gamma | — | — |
Dickeya dianthicola 67-19 | 0.82 | HGI48_RS17110 | | MFS transporter | 0.26 | HGI48_RS11105 | | exodeoxyribonuclease V subunit gamma | — | — |
Dickeya dianthicola ME23 | 0.82 | DZA65_RS18185 | | MFS transporter | 0.25 | DZA65_RS11485 | | exodeoxyribonuclease V subunit gamma | — | — |
Pseudomonas putida KT2440 | 0.69 | PP_3600 | | glucarate transporter | 0.30 | PP_4674 | | ATP-dependent DNA helicase and dsDNA/ssDNA exonuclease, ssDNA endonuclease, recombinase subunit | — | — |
Pseudomonas fluorescens SBW25-INTG | 0.69 | PFLU_RS04245 | | MFS transporter | 0.29 | PFLU_RS25595 | | exodeoxyribonuclease V subunit gamma | low | > 109 |
Pseudomonas fluorescens SBW25 | 0.69 | PFLU_RS04245 | | MFS transporter | 0.29 | PFLU_RS25595 | | exodeoxyribonuclease V subunit gamma | low | > 109 |
Pseudomonas sp. RS175 | 0.69 | PFR28_00144 | | putative glucarate transporter | 0.30 | PFR28_00006 | | RecBCD enzyme subunit RecC | low | > 88 |
Pseudomonas fluorescens FW300-N2E2 | 0.69 | Pf6N2E2_3297 | | D-galactarate permease | 0.29 | Pf6N2E2_3461 | | Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) | low | > 103 |
Pseudomonas fluorescens FW300-N2E3 | 0.69 | AO353_05295 | | glucarate transporter | 0.29 | AO353_06050 | | exodeoxyribonuclease V subunit gamma | low | > 101 |
Pseudomonas simiae WCS417 | 0.68 | PS417_04205 | | D-galacturonate transporter (MFS superfamily) (from data) | 0.28 | PS417_23780 | | exodeoxyribonuclease V subunit gamma | — | — |
Pseudomonas fluorescens FW300-N2C3 | 0.68 | AO356_07175 | | glucarate transporter | 0.29 | AO356_07920 | | exodeoxyribonuclease V subunit gamma | low | > 104 |
Pseudomonas fluorescens GW456-L13 | 0.68 | PfGW456L13_5043 | | D-galactarate permease | 0.28 | PfGW456L13_5152 | | Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) | low | > 87 |
Pseudomonas fluorescens FW300-N1B4 | 0.67 | Pf1N1B4_1108 | | D-galactarate permease | 0.29 | Pf1N1B4_1236 | | Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) | low | > 87 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.67 | Psyr_4226 | | D-galactonate transporter | 0.28 | Psyr_0680 | | DNA helicase/exodeoxyribonuclease V, gamma subunit | low | > 86 |
Pseudomonas syringae pv. syringae B728a | 0.67 | Psyr_4226 | | D-galactonate transporter | 0.28 | Psyr_0680 | | DNA helicase/exodeoxyribonuclease V, gamma subunit | low | > 86 |
Xanthomonas campestris pv. campestris strain 8004 | 0.66 | Xcc-8004.1209.1 | | D-galactarate permease | 0.18 | Xcc-8004.5354.1 | | Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) | — | — |
Paraburkholderia sabiae LMG 24235 | 0.65 | QEN71_RS31870 | | MFS transporter | 0.18 | QEN71_RS23195 | | exodeoxyribonuclease V subunit gamma | — | — |
Paraburkholderia graminis OAS925 | 0.64 | ABIE53_006507 | | ACS family glucarate transporter-like MFS transporter | 0.26 | ABIE53_000494 | | exodeoxyribonuclease V gamma subunit | low | > 113 |
Burkholderia phytofirmans PsJN | 0.64 | BPHYT_RS24150 | | glucarate transporter | 0.18 | BPHYT_RS07970 | | exodeoxyribonuclease V subunit gamma | — | — |
Paraburkholderia bryophila 376MFSha3.1 | 0.64 | H281DRAFT_05318 | | MFS transporter, ACS family, glucarate transporter | 0.17 | H281DRAFT_05085 | | DNA helicase/exodeoxyribonuclease V, gamma subunit | low | > 103 |
Not shown: 9 genomes with orthologs for EFB2_01128 only; 17 genomes with orthologs for EFB2_01062 only