Conservation of cofitness between ECD_03444 and ECD_04158 in Escherichia coli BL21

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03444 L-threonine dehydrogenase 1.0 ECD_04158 anti-sigma transmembrane signal transducer for ferric citrate transport; periplasmic FecA-bound ferric citrate sensor and cytoplasmic FecI ECF sigma factor activator low > 61
Escherichia coli BW25113 1.00 b3589 yiaY predicted Fe-containing alcohol dehydrogenase (NCBI) 1.00 b4292 fecR KpLE2 phage-like element; transmembrane signal transducer for ferric citrate transport (NCBI) low > 76
Escherichia coli ECOR38 0.99 HEPCGN_14690 yiaY L-threonine dehydrogenase 1.00 HEPCGN_09825 fecR fec operon regulator FecR low > 87
Escherichia coli Nissle 1917 0.98 ECOLIN_RS20505 L-threonine dehydrogenase 1.00 ECOLIN_RS25755 ferric citrate uptake sigma factor regulator FecR low > 55
Serratia liquefaciens MT49 0.74 IAI46_19495 L-threonine dehydrogenase 0.43 IAI46_11740 fec operon regulator FecR — —
Rhodospirillum rubrum S1H 0.69 Rru_A0930 Iron-containing alcohol dehydrogenase (NCBI) 0.17 Rru_A1439 Putative FecR (NCBI) low > 58
Pseudomonas simiae WCS417 0.69 PS417_06905 alcohol dehydrogenase 0.34 PS417_28530 iron transporter low > 88
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS06965 L-threonine dehydrogenase 0.34 PFLU_RS30185 DUF4880 domain-containing protein low > 109
Pseudomonas fluorescens SBW25 0.69 PFLU_RS06965 L-threonine dehydrogenase 0.34 PFLU_RS30185 DUF4880 domain-containing protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.69 Pf1N1B4_3270 Alcohol dehydrogenase (EC 1.1.1.1) 0.31 Pf1N1B4_4817 Fe2+-dicitrate sensor, membrane component low > 87
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_3987 Iron-containing alcohol dehydrogenase 0.26 Psyr_1039 FecR protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_3987 Iron-containing alcohol dehydrogenase 0.26 Psyr_1039 FecR protein low > 86
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_2802 Alcohol dehydrogenase (EC 1.1.1.1) 0.34 Pf6N2E2_2097 Fe2+-dicitrate sensor, membrane component low > 103
Pseudomonas fluorescens FW300-N2C3 0.68 AO356_04765 lactaldehyde reductase 0.34 AO356_21715 iron dicitrate transport regulator FecR — —
Pseudomonas stutzeri RCH2 0.68 Psest_0672 Alcohol dehydrogenase, class IV 0.25 Psest_4338 Fe2+-dicitrate sensor, membrane component low > 67
Dickeya dadantii 3937 0.67 DDA3937_RS11900 L-threonine dehydrogenase 0.17 DDA3937_RS03530 DUF4880 domain-containing protein low > 74
Rhodopseudomonas palustris CGA009 0.66 TX73_006190 L-threonine dehydrogenase 0.20 TX73_016960 FecR family protein low > 86
Pseudomonas sp. RS175 0.66 PFR28_00654 Alcohol dehydrogenase 2 0.28 PFR28_00231 Protein FecR low > 88
Rahnella sp. WP5 0.59 EX31_RS00895 iron-containing alcohol dehydrogenase 0.27 EX31_RS16490 DUF4880 domain-containing protein low > 89
Klebsiella michiganensis M5al 0.41 BWI76_RS00645 lactaldehyde reductase 0.65 BWI76_RS11390 iron dicitrate transport regulator FecR low > 92
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_3512 Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) 0.35 PfGW456L13_3564 Fe2+-dicitrate sensor, membrane component — —
Pseudomonas putida KT2440 0.33 PP_2682 Fe-containing alcohol dehydrogenase 0.28 PP_0703 putative Transmembrane sensor low > 96
Agrobacterium fabrum C58 0.26 Atu5138 gamma hydroxybutyrate dehydrogenase 0.13 Atu5310 transmembrane sensor — —
Paraburkholderia graminis OAS925 0.25 ABIE53_004445 alcohol dehydrogenase 0.12 ABIE53_002675 transmembrane sensor low > 113
Sinorhizobium meliloti 1021 0.25 SMc01582 alcohol dehydrogenase 0.10 SMc04204 iron transport regulator transmembrane protein low > 103
Herbaspirillum seropedicae SmR1 0.24 HSERO_RS00730 4-hydroxybutyrate dehydrogenase 0.30 HSERO_RS22400 Fe2+-dicitrate sensor membrane protein low > 78
Variovorax sp. SCN45 0.24 GFF25 Alcohol dehydrogenase (EC 1.1.1.1) 0.33 GFF5857 Fe2+-dicitrate sensor, membrane component low > 127
Paraburkholderia sabiae LMG 24235 0.23 QEN71_RS05010 iron-containing alcohol dehydrogenase 0.32 QEN71_RS15140 FecR domain-containing protein low > 153
Cupriavidus basilensis FW507-4G11 0.23 RR42_RS11005 4-hydroxybutyrate dehydrogenase 0.27 RR42_RS31150 hypothetical protein low > 128

Not shown: 35 genomes with orthologs for ECD_03444 only; 13 genomes with orthologs for ECD_04158 only