Conservation of cofitness between ECD_00865 and ECD_04042 in Escherichia coli BL21

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00865 arginine ABC transporter periplasmic binding protein 1.0 ECD_04042 HflB protease modulator specific for phage lambda cII repressor 0.59 14
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02808 ABC transporter arginine-binding protein 1 1.00 OHPLBJKB_03867 Modulator of FtsH protease HflC low > 73
Escherichia coli ECOR27 1.00 NOLOHH_22300 artJ ABC transporter substrate-binding protein ArtJ 1.00 NOLOHH_04505 hflC protease modulator HflC — —
Escherichia coli Nissle 1917 1.00 ECOLIN_RS04580 arginine ABC transporter substrate-binding protein ArtJ 1.00 ECOLIN_RS24245 protease modulator HflC — —
Escherichia coli ECRC62 1.00 BNILDI_20555 artJ ABC transporter substrate-binding protein ArtJ 1.00 BNILDI_06985 hflC protease modulator HflC — —
Escherichia coli ECOR38 1.00 HEPCGN_02100 artJ ABC transporter substrate-binding protein ArtJ 1.00 HEPCGN_10470 hflC protease modulator HflC low > 85
Escherichia coli BW25113 1.00 b0860 artJ arginine transporter subunit (NCBI) 1.00 b4175 hflC modulator for HflB protease specific for phage lambda cII repressor (NCBI) low > 76
Escherichia fergusonii Becca 1.00 EFB2_03201 ABC transporter arginine-binding protein 1 1.00 EFB2_04360 Modulator of FtsH protease HflC low > 86
Escherichia coli ECRC99 0.97 KEDOAH_21995 artJ ABC transporter substrate-binding protein ArtJ 1.00 KEDOAH_15915 hflC protease modulator HflC — —
Escherichia coli ECRC102 0.97 NIAGMN_03960 artJ ABC transporter substrate-binding protein ArtJ 1.00 NIAGMN_10090 hflC protease modulator HflC — —
Escherichia coli ECRC101 0.97 OKFHMN_05915 artJ ABC transporter substrate-binding protein ArtJ 1.00 OKFHMN_12240 hflC protease modulator HflC — —
Escherichia coli ECRC101 0.97 MCAODC_25130 artJ ABC transporter substrate-binding protein ArtJ 1.00 MCAODC_02755 hflC protease modulator HflC — —
Escherichia coli ECRC98 0.97 JDDGAC_09550 artJ ABC transporter substrate-binding protein ArtJ 1.00 JDDGAC_15880 hflC protease modulator HflC — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF768 Arginine ABC transporter, periplasmic arginine-binding protein ArtJ 0.89 GFF828 HflC protein low > 78
Klebsiella michiganensis M5al 0.84 BWI76_RS09500 arginine ABC transporter substrate-binding protein 0.87 BWI76_RS02550 protease modulator HflC low > 92
Enterobacter asburiae PDN3 0.83 EX28DRAFT_2091 lysine-arginine-ornithine-binding periplasmic protein 0.85 EX28DRAFT_3372 HflC protein low > 76
Enterobacter sp. TBS_079 0.83 MPMX20_01503 ABC transporter arginine-binding protein 1 0.87 MPMX20_00456 Modulator of FtsH protease HflC low > 85
Pectobacterium carotovorum WPP14 0.81 HER17_RS12470 arginine ABC transporter substrate-binding protein 0.79 HER17_RS02600 protease modulator HflC low > 75
Dickeya dadantii 3937 0.80 DDA3937_RS09495 arginine ABC transporter substrate-binding protein 0.74 DDA3937_RS18595 protease modulator HflC — —
Dickeya dianthicola ME23 0.77 DZA65_RS09825 arginine ABC transporter substrate-binding protein 0.74 DZA65_RS19665 protease modulator HflC low > 75
Serratia liquefaciens MT49 0.75 IAI46_08400 arginine ABC transporter substrate-binding protein 0.79 IAI46_01640 protease modulator HflC low > 86
Rahnella sp. WP5 0.73 EX31_RS18655 arginine ABC transporter substrate-binding protein 0.79 EX31_RS08805 protease modulator HflC low > 89
Pantoea sp. MT58 0.73 IAI47_13015 arginine ABC transporter substrate-binding protein 0.82 IAI47_02605 protease modulator HflC low > 76
Agrobacterium fabrum C58 0.39 Atu1879 ABC transporter, substrate binding protein (amino acid) 0.26 Atu2044 HFLC protein low > 89
Pseudomonas putida KT2440 0.39 PP_0282 L-arginine ABC transporter - periplasmic binding subunit 0.30 PP_4891 integral membrane ATP-dependent zinc metallopeptidase / HflK-HflC complex low > 96
Sinorhizobium meliloti 1021 0.38 SMc00140 L-lysine ABC transporter, substrate-binding component (from data) 0.23 SMc01440 hydrolase serine protease transmembrane protein low > 103
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS01535 ABC transporter substrate-binding protein 0.30 PFLU_RS02585 protease modulator HflC low > 109
Pseudomonas fluorescens FW300-N2C3 0.37 AO356_09900 ABC transporter for L-Lysine, periplasmic substrate-binding component (from data) 0.31 AO356_08640 membrane protease HflC low > 104
Pseudomonas fluorescens FW300-N1B4 0.37 Pf1N1B4_1641 Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1) 0.32 Pf1N1B4_1409 HflC protein — —
Pseudomonas fluorescens SBW25 0.37 PFLU_RS01535 ABC transporter substrate-binding protein 0.30 PFLU_RS02585 protease modulator HflC low > 109
Pseudomonas simiae WCS417 0.37 PS417_01495 amino acid ABC transporter 0.28 PS417_02505 membane protease HflC — —
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_377 Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1) 0.31 PfGW456L13_151 HflC protein low > 87
Rhizobium sp. OAE497 0.37 ABIE40_RS10615 ABC transporter substrate-binding protein 0.21 ABIE40_RS11530 protease modulator HflC low > 107
Pseudomonas stutzeri RCH2 0.35 Psest_0138 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 0.30 Psest_0686 Membrane protease subunits, stomatin/prohibitin homologs — —
Azospirillum sp. SherDot2 0.33 MPMX19_02976 Octopine-binding periplasmic protein 0.29 MPMX19_01250 Modulator of FtsH protease HflC — —
Bosea sp. OAE506 0.30 ABIE41_RS21180 transporter substrate-binding domain-containing protein 0.26 ABIE41_RS12855 protease modulator HflC low > 77
Shewanella loihica PV-4 0.25 Shew_3166 extracellular solute-binding protein (RefSeq) 0.47 Shew_0569 HflC protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.24 Shewana3_0882 extracellular solute-binding protein (RefSeq) 0.49 Shewana3_0600 HflC protein (RefSeq) low > 73
Desulfovibrio vulgaris Miyazaki F 0.24 DvMF_0860 extracellular solute-binding protein family 3 (RefSeq) 0.26 DvMF_2675 HflC protein (RefSeq) low > 51
Shewanella oneidensis MR-1 0.24 SO1044 amino acid ABC transporter, periplasmic amino acid-binding protein (NCBI ptt file) 0.49 SO0606 hflC hflC protein (NCBI ptt file) low > 76
Ralstonia solanacearum GMI1000 0.21 RS_RS19470 amino acid ABC transporter substrate-binding protein 0.30 RS_RS06125 protease modulator HflC — —

Not shown: 4 genomes with orthologs for ECD_00865 only; 44 genomes with orthologs for ECD_04042 only