Conservation of cofitness between ECD_00865 and ECD_03883 in Escherichia coli BL21

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00865 arginine ABC transporter periplasmic binding protein 1.0 ECD_03883 IMP cyclohydrolase and phosphoribosylaminoimidazolecarboxamide formyltransferase 0.58 20
Escherichia coli Nissle 1917 1.00 ECOLIN_RS04580 arginine ABC transporter substrate-binding protein ArtJ 0.99 ECOLIN_RS23100 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 52
Escherichia coli ECOR38 1.00 HEPCGN_02100 artJ ABC transporter substrate-binding protein ArtJ 0.99 HEPCGN_11950 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 85
Escherichia coli ECRC62 1.00 BNILDI_20555 artJ ABC transporter substrate-binding protein ArtJ 0.99 BNILDI_06065 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase — —
Escherichia coli ECOR27 1.00 NOLOHH_22300 artJ ABC transporter substrate-binding protein ArtJ 1.00 NOLOHH_05455 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 57
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02808 ABC transporter arginine-binding protein 1 0.99 OHPLBJKB_04043 Bifunctional purine biosynthesis protein PurH low > 73
Escherichia coli BW25113 1.00 b0860 artJ arginine transporter subunit (NCBI) 1.00 b4006 purH bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (NCBI) 0.18 50
Escherichia fergusonii Becca 1.00 EFB2_03201 ABC transporter arginine-binding protein 1 0.99 EFB2_04604 Bifunctional purine biosynthesis protein PurH low > 86
Escherichia coli ECRC102 0.97 NIAGMN_03960 artJ ABC transporter substrate-binding protein ArtJ 1.00 NIAGMN_11060 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase — —
Escherichia coli ECRC99 0.97 KEDOAH_21995 artJ ABC transporter substrate-binding protein ArtJ 1.00 KEDOAH_14850 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase — —
Escherichia coli ECRC101 0.97 OKFHMN_05915 artJ ABC transporter substrate-binding protein ArtJ 1.00 OKFHMN_13310 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase — —
Escherichia coli ECRC101 0.97 MCAODC_25130 artJ ABC transporter substrate-binding protein ArtJ 1.00 MCAODC_03810 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase — —
Escherichia coli ECRC98 0.97 JDDGAC_09550 artJ ABC transporter substrate-binding protein ArtJ 1.00 JDDGAC_16935 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF768 Arginine ABC transporter, periplasmic arginine-binding protein ArtJ 0.96 GFF4186 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) low > 78
Klebsiella michiganensis M5al 0.84 BWI76_RS09500 arginine ABC transporter substrate-binding protein 0.94 BWI76_RS01615 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase low > 92
Enterobacter asburiae PDN3 0.83 EX28DRAFT_2091 lysine-arginine-ornithine-binding periplasmic protein 0.94 EX28DRAFT_4545 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) — —
Enterobacter sp. TBS_079 0.83 MPMX20_01503 ABC transporter arginine-binding protein 1 0.94 MPMX20_00226 Bifunctional purine biosynthesis protein PurH 0.25 28
Pectobacterium carotovorum WPP14 0.81 HER17_RS12470 arginine ABC transporter substrate-binding protein 0.90 HER17_RS20335 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 75
Dickeya dadantii 3937 0.80 DDA3937_RS09495 arginine ABC transporter substrate-binding protein 0.91 DDA3937_RS01220 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 74
Dickeya dianthicola ME23 0.77 DZA65_RS09825 arginine ABC transporter substrate-binding protein 0.90 DZA65_RS01260 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 75
Serratia liquefaciens MT49 0.75 IAI46_08400 arginine ABC transporter substrate-binding protein 0.89 IAI46_01365 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 86
Pantoea sp. MT58 0.73 IAI47_13015 arginine ABC transporter substrate-binding protein 0.90 IAI47_18040 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 76
Rahnella sp. WP5 0.73 EX31_RS18655 arginine ABC transporter substrate-binding protein 0.88 EX31_RS16860 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 89
Agrobacterium fabrum C58 0.39 Atu1879 ABC transporter, substrate binding protein (amino acid) 0.46 Atu2823 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase — —
Pseudomonas putida KT2440 0.39 PP_0282 L-arginine ABC transporter - periplasmic binding subunit 0.68 PP_4822 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase — —
Sinorhizobium meliloti 1021 0.38 SMc00140 L-lysine ABC transporter, substrate-binding component (from data) 0.47 SMc04088 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 103
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS01535 ABC transporter substrate-binding protein 0.69 PFLU_RS03015 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH — —
Pseudomonas fluorescens FW300-N1B4 0.37 Pf1N1B4_1641 Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1) 0.70 Pf1N1B4_1315 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) low > 87
Pseudomonas fluorescens FW300-N2C3 0.37 AO356_09900 ABC transporter for L-Lysine, periplasmic substrate-binding component (from data) 0.69 AO356_08225 phosphoribosylaminoimidazolecarboxamide formyltransferase — —
Pseudomonas fluorescens SBW25 0.37 PFLU_RS01535 ABC transporter substrate-binding protein 0.69 PFLU_RS03015 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH low > 109
Pseudomonas simiae WCS417 0.37 PS417_01495 amino acid ABC transporter 0.69 PS417_02940 phosphoribosylaminoimidazolecarboxamide formyltransferase — —
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_377 Lysine-arginine-ornithine-binding periplasmic protein precursor (TC 3.A.1.3.1) 0.69 PfGW456L13_57 IMP cyclohydrolase (EC 3.5.4.10) / Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) — —
Rhizobium sp. OAE497 0.37 ABIE40_RS10615 ABC transporter substrate-binding protein 0.47 ABIE40_RS19130 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 107
Pseudomonas stutzeri RCH2 0.35 Psest_0138 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 0.68 Psest_1014 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase — —
Azospirillum sp. SherDot2 0.33 MPMX19_02976 Octopine-binding periplasmic protein 0.54 MPMX19_02325 Bifunctional purine biosynthesis protein PurH — —
Bosea sp. OAE506 0.30 ABIE41_RS21180 transporter substrate-binding domain-containing protein 0.51 ABIE41_RS05095 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 0.26 50
Fusobacterium nucleatum SB010 0.27 HUW76_06455 basic amino acid ABC transporter substrate-binding protein 0.44 HUW76_05195 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 35
Shewanella loihica PV-4 0.25 Shew_3166 extracellular solute-binding protein (RefSeq) 0.77 Shew_3412 purH bifunctionalphosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (RefSeq) low > 60
Caulobacter crescentus NA1000 0.24 CCNA_01508 cystine-binding protein 0.47 CCNA_00084 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 66
Shewanella sp. ANA-3 0.24 Shewana3_0882 extracellular solute-binding protein (RefSeq) 0.74 Shewana3_0441 purH bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (RefSeq) low > 73
Caulobacter crescentus NA1000 Δfur 0.24 CCNA_01508 cystine-binding protein 0.47 CCNA_00084 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase low > 67
Shewanella oneidensis MR-1 0.24 SO1044 amino acid ABC transporter, periplasmic amino acid-binding protein (NCBI ptt file) 0.73 SO0442 purH phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase (NCBI ptt file) low > 76
Ralstonia solanacearum GMI1000 0.21 RS_RS19470 amino acid ABC transporter substrate-binding protein 0.59 RS_RS02505 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase — —

Not shown: 2 genomes with orthologs for ECD_00865 only; 57 genomes with orthologs for ECD_03883 only