Conservation of cofitness between ECD_02103 and ECD_03686 in Escherichia coli BL21

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02103 Zn-stimulated GTPase involved in zinc homeostasis; mutants are cadmium and EDTA sensitive; Zn(2+) binding protein 1.0 ECD_03686 DUF484 family protein 0.38 8
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01536 Zinc-binding GTPase YeiR 1.00 OHPLBJKB_04240 hypothetical protein low > 73
Escherichia coli ECOR27 1.00 NOLOHH_14985 yeiR zinc-binding GTPase YeiR 1.00 NOLOHH_06555 yigA Uncharacterized protein YigA low > 57
Escherichia coli BW25113 1.00 b2173 yeiR predicted enzyme (NCBI) 1.00 b3810 yigA hypothetical protein (NCBI) low > 76
Escherichia coli ECRC62 1.00 BNILDI_13905 yeiR zinc-binding GTPase YeiR 1.00 BNILDI_04980 yigA Uncharacterized protein YigA — —
Escherichia coli ECOR38 1.00 HEPCGN_22675 yeiR zinc-binding GTPase YeiR 1.00 HEPCGN_13130 yigA Uncharacterized protein YigA low > 85
Escherichia fergusonii Becca 0.99 EFB2_01683 Zinc-binding GTPase YeiR 1.00 EFB2_04827 hypothetical protein low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS12710 zinc-binding GTPase YeiR 0.99 ECOLIN_RS21870 DUF484 domain-containing protein — —
Escherichia coli ECRC101 0.99 OKFHMN_23410 yeiR zinc-binding GTPase YeiR 1.00 OKFHMN_14425 yigA Uncharacterized protein YigA — —
Escherichia coli ECRC98 0.99 JDDGAC_27370 yeiR zinc-binding GTPase YeiR 1.00 JDDGAC_18050 yigA Uncharacterized protein YigA — —
Escherichia coli ECRC102 0.99 NIAGMN_21175 yeiR zinc-binding GTPase YeiR 1.00 NIAGMN_12180 yigA Uncharacterized protein YigA — —
Escherichia coli ECRC99 0.99 KEDOAH_04775 yeiR zinc-binding GTPase YeiR 1.00 KEDOAH_13725 yigA Uncharacterized protein YigA — —
Escherichia coli ECRC101 0.99 MCAODC_14460 yeiR zinc-binding GTPase YeiR 0.99 MCAODC_04930 yigA Uncharacterized protein YigA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.90 GFF3763 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family 0.81 GFF238 Protein of unknown function DUF484 low > 78
Enterobacter asburiae PDN3 0.85 EX28DRAFT_0388 Putative GTPases (G3E family) 0.84 EX28DRAFT_4479 Uncharacterized protein conserved in bacteria low > 76
Enterobacter sp. TBS_079 0.83 MPMX20_03139 Zinc-binding GTPase YeiR 0.83 MPMX20_04466 hypothetical protein low > 85
Klebsiella michiganensis M5al 0.81 BWI76_RS19760 GTP-binding protein 0.72 BWI76_RS01205 DUF484 family protein low > 92
Rahnella sp. WP5 0.70 EX31_RS19110 GTP-binding protein 0.57 EX31_RS15160 DUF484 domain-containing protein low > 89
Serratia liquefaciens MT49 0.69 IAI46_17295 GTP-binding protein 0.66 IAI46_00720 DUF484 domain-containing protein low > 86
Dickeya dianthicola ME23 0.66 DZA65_RS09545 GTP-binding protein 0.58 DZA65_RS21095 DUF484 domain-containing protein low > 75
Dickeya dadantii 3937 0.66 DDA3937_RS09205 GTP-binding protein 0.59 DDA3937_RS19895 DUF484 domain-containing protein low > 74
Dickeya dianthicola 67-19 0.65 HGI48_RS09240 GTP-binding protein 0.58 HGI48_RS20050 DUF484 domain-containing protein low > 71
Pectobacterium carotovorum WPP14 0.65 HER17_RS12885 GTP-binding protein 0.62 HER17_RS01345 DUF484 domain-containing protein low > 75
Pantoea sp. MT58 0.59 IAI47_06635 GTP-binding protein 0.66 IAI47_18405 DUF484 domain-containing protein low > 76
Vibrio cholerae E7946 ATCC 55056 0.41 CSW01_16870 GTP-binding protein 0.16 CSW01_00645 DUF484 domain-containing protein low > 62
Marinobacter adhaerens HP15 0.36 HP15_889 cobalamin synthesis protein/P47K family protein 0.13 HP15_249 protein containing DUF484 low > 73
Shewanella amazonensis SB2B 0.34 Sama_2446 cobalamin synthesis protein/P47K family protein (RefSeq) 0.14 Sama_3248 hypothetical protein (RefSeq) low > 62
Shewanella oneidensis MR-1 0.34 SO1502 cobalamin synthesis protein/P47K family protein (NCBI ptt file) 0.13 SO4307 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.31 Shewana3_2927 cobalamin synthesis protein, P47K (RefSeq) 0.12 Shewana3_0392 hypothetical protein (RefSeq) low > 73
Pseudomonas fluorescens FW300-N2C3 0.25 AO356_11955 cobalamin biosynthesis protein CobW 0.14 AO356_12730 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.24 Pf6N2E2_4266 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family 0.15 Pf6N2E2_4417 Protein of unknown function DUF484 low > 103
Pseudomonas fluorescens SBW25-INTG 0.24 PFLU_RS29940 cobalamin biosynthesis protein CobW 0.15 PFLU_RS29275 DUF484 family protein low > 109
Pseudomonas fluorescens SBW25 0.24 PFLU_RS29940 cobalamin biosynthesis protein CobW 0.15 PFLU_RS29275 DUF484 family protein low > 109
Pseudomonas simiae WCS417 0.24 PS417_28275 cobalamin biosynthesis protein CobW 0.14 PS417_27590 hypothetical protein low > 88
Pseudomonas sp. S08-1 0.24 OH686_12895 Metal chaperone 0.13 OH686_13790 Protein of unknown function DUF484 low > 80
Pseudomonas sp. RS175 0.23 PFR28_04530 Zinc-binding GTPase YeiR 0.14 PFR28_04377 hypothetical protein low > 88
Pseudomonas syringae pv. syringae B728a 0.22 Psyr_5072 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K 0.16 Psyr_0184 Protein of unknown function DUF484 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.22 Psyr_5072 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K 0.16 Psyr_0184 Protein of unknown function DUF484 low > 86
Pseudomonas fluorescens GW456-L13 0.22 PfGW456L13_715 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family 0.13 PfGW456L13_843 Protein of unknown function DUF484 low > 87
Pseudomonas fluorescens FW300-N2E3 0.21 AO353_10095 cobalamin biosynthesis protein CobW 0.15 AO353_09045 hypothetical protein low > 101
Pseudomonas putida KT2440 0.21 PP_5359 CobW/P47K family protein 0.13 PP_5229 conserved protein of unknown function low > 96

Not shown: 4 genomes with orthologs for ECD_02103 only; 7 genomes with orthologs for ECD_03686 only