Conservation of cofitness between ECD_00149 and ECD_03642 in Escherichia coli BL21

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00149 ferrichrome outer membrane transporter 1.0 ECD_03642 flhDC operon transcriptional repressor 0.51 7
Escherichia coli ECOR27 1.00 NOLOHH_02665 fhuA ferrichrome porin FhuA 0.99 NOLOHH_06810 hdfR HTH-type transcriptional regulator HdfR low > 75
Escherichia coli ECRC62 1.00 BNILDI_09005 fhuA ferrichrome porin FhuA 0.99 BNILDI_04715 hdfR HTH-type transcriptional regulator HdfR low > 75
Escherichia coli BW25113 1.00 b0150 fhuA ferrichrome outer membrane transporter (NCBI) 1.00 b4480 hdfR transcriptional regulator HdfR (NCBI) low > 76
Escherichia coli ECRC100 1.00 OKFHMN_10320 fhuA ferrichrome porin FhuA 0.99 OKFHMN_14675 hdfR HTH-type transcriptional regulator HdfR low > 80
Escherichia coli ECRC98 1.00 JDDGAC_13915 fhuA ferrichrome porin FhuA 0.99 JDDGAC_18295 hdfR HTH-type transcriptional regulator HdfR low > 86
Escherichia coli ECRC99 1.00 KEDOAH_17835 fhuA ferrichrome porin FhuA 0.99 KEDOAH_13475 hdfR HTH-type transcriptional regulator HdfR — —
Escherichia coli ECRC101 1.00 MCAODC_00835 fhuA ferrichrome porin FhuA 0.99 MCAODC_05180 hdfR HTH-type transcriptional regulator HdfR low > 87
Escherichia coli ECRC102 1.00 NIAGMN_08170 fhuA ferrichrome porin FhuA 0.99 NIAGMN_12430 hdfR HTH-type transcriptional regulator HdfR — —
Escherichia coli ECOR38 0.90 HEPCGN_08270 fhuA ferrichrome porin FhuA 0.99 HEPCGN_13385 hdfR HTH-type transcriptional regulator HdfR 0.52 69
Escherichia coli Nissle 1917 0.90 ECOLIN_RS00840 ferrichrome porin FhuA 0.99 ECOLIN_RS21630 HTH-type transcriptional regulator HdfR low > 55
Escherichia fergusonii Becca 0.89 EFB2_03894 Ferrichrome outer membrane transporter/phage receptor 0.99 EFB2_04871 HTH-type transcriptional regulator HdfR low > 86
Enterobacter asburiae PDN3 0.89 EX28DRAFT_3739 TonB-dependent siderophore receptor 0.83 EX28DRAFT_4436 Transcriptional regulator low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.74 OHPLBJKB_03512 Ferrichrome outer membrane transporter/phage receptor 1.00 OHPLBJKB_04288 HTH-type transcriptional regulator HdfR low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF81 Ferric hydroxamate outer membrane receptor FhuA 0.87 GFF2907 HTH-type transcriptional regulator hdfR low > 78
Klebsiella michiganensis M5al 0.62 BWI76_RS05125 ferrichrome porin FhuA 0.80 BWI76_RS00940 transcriptional regulator HdfR low > 92
Rahnella sp. WP5 0.56 EX31_RS03225 ferrichrome porin FhuA 0.59 EX31_RS14970 HTH-type transcriptional regulator HdfR low > 89
Enterobacter sp. TBS_079 0.56 MPMX20_00836 Ferrichrome outer membrane transporter/phage receptor 0.83 MPMX20_04505 HTH-type transcriptional regulator HdfR low > 85
Serratia liquefaciens MT49 0.55 IAI46_21185 ferrichrome porin FhuA 0.61 IAI46_24385 HTH-type transcriptional regulator HdfR low > 86
Pantoea sp. MT58 0.53 IAI47_15610 ferrichrome porin FhuA 0.63 IAI47_01000 HTH-type transcriptional regulator HdfR low > 76
Azospirillum sp. SherDot2 0.33 MPMX19_05479 Ferrichrome outer membrane transporter/phage receptor 0.17 MPMX19_03737 HTH-type transcriptional regulator HdfR low > 112
Dickeya dadantii 3937 0.33 DDA3937_RS14700 TonB-dependent siderophore receptor 0.61 DDA3937_RS20190 HTH-type transcriptional regulator HdfR low > 74
Pseudomonas simiae WCS417 0.33 PS417_11955 ligand-gated channel 0.18 PS417_17700 LysR family transcriptional regulator low > 88
Pseudomonas sp. RS175 0.32 PFR28_04773 Ferrichrome outer membrane transporter/phage receptor 0.16 PFR28_01360 HTH-type transcriptional regulator HdfR low > 88
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_3994 Ferrichrome-iron receptor 0.17 Pf6N2E2_2079 HTH-type transcriptional regulator hdfR low > 103
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_10630 ferrioxamine B receptor 0.17 AO356_00585 LysR family transcriptional regulator low > 104
Dickeya dianthicola 67-19 0.32 HGI48_RS14640 TonB-dependent siderophore receptor 0.60 HGI48_RS20335 HTH-type transcriptional regulator HdfR low > 71
Dickeya dianthicola ME23 0.32 DZA65_RS15585 TonB-dependent siderophore receptor 0.60 DZA65_RS21375 HTH-type transcriptional regulator HdfR low > 75
Pseudomonas putida KT2440 0.31 PP_0160 putative ferrioxamine receptor 0.16 PP_2350 LysR family transcriptional regulator low > 96
Pseudomonas stutzeri RCH2 0.31 Psest_4337 TonB-dependent siderophore receptor 0.18 Psest_0802 Transcriptional regulator low > 67
Pectobacterium carotovorum WPP14 0.30 HER17_RS02320 TonB-dependent siderophore receptor 0.60 HER17_RS01040 HTH-type transcriptional regulator HdfR low > 75
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_1133 Ferrichrome-iron receptor @ Ferric siderophore receptor, TonB dependent 0.18 PfGW456L13_2837 HTH-type transcriptional regulator hdfR low > 87
Sinorhizobium meliloti 1021 0.26 SMc01657 ferrioxamine B receptor precursor protein 0.20 SMc02596 transcriptional regulator 0.17 82
Vibrio cholerae E7946 ATCC 55056 0.23 CSW01_01065 TonB-dependent siderophore receptor 0.29 CSW01_19195 LysR family transcriptional regulator low > 62
Shewanella amazonensis SB2B 0.20 Sama_2875 outer membrane protein (RefSeq) 0.31 Sama_1997 LysR family transcriptional regulator (RefSeq) low > 62
Pseudomonas fluorescens FW300-N2E3 0.14 AO353_05095 TonB-dependent receptor 0.17 AO353_22745 LysR family transcriptional regulator low > 101
Shewanella sp. ANA-3 0.12 Shewana3_0983 TonB-dependent siderophore receptor (RefSeq) 0.31 Shewana3_2403 LysR family transcriptional regulator (RefSeq) low > 73
Shewanella oneidensis MR-1 0.11 SO1156 TonB-dependent receptor (NCBI ptt file) 0.32 SO2202 transcriptional regulator, LysR family (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.10 Shew_3841 TonB-dependent siderophore receptor (RefSeq) 0.26 Shew_2897 LysR family transcriptional regulator (RefSeq) low > 60
Erwinia tracheiphila SCR3 0.06 LU632_RS10235 TonB-dependent siderophore receptor 0.62 LU632_RS24450 hdfR HTH-type transcriptional regulator HdfR low > 74

Not shown: 43 genomes with orthologs for ECD_00149 only; 2 genomes with orthologs for ECD_03642 only