Conservation of cofitness between ECD_01649 and ECD_02910 in Escherichia coli BL21

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_01649 cysteine desulfurase, stimulated by SufE; selenocysteine lyase, PLP-dependent 1.0 ECD_02910 ATP-Grasp family ATPase 0.49 12
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02044 Cysteine desulfurase 1.00 OHPLBJKB_00666 Putative acid--amine ligase YgiC low > 73
Escherichia coli ECRC62 0.99 BNILDI_16580 sufS cysteine desulfurase SufS 1.00 BNILDI_00915 ygiC Putative acid--amine ligase YgiC low > 75
Escherichia coli ECRC102 0.99 NIAGMN_00795 sufS cysteine desulfurase SufS 1.00 NIAGMN_16560 ygiC Putative acid--amine ligase YgiC — —
Escherichia coli BW25113 0.99 b1680 sufS selenocysteine lyase (NCBI) 1.00 b3038 ygiC predicted enzyme (NCBI) low > 76
Escherichia coli ECRC100 0.99 OKFHMN_27270 sufS cysteine desulfurase SufS 1.00 OKFHMN_18795 ygiC Putative acid--amine ligase YgiC low > 80
Escherichia coli ECRC101 0.99 MCAODC_18140 sufS cysteine desulfurase SufS 1.00 MCAODC_09310 ygiC Putative acid--amine ligase YgiC low > 87
Escherichia coli ECRC99 0.99 KEDOAH_00840 sufS cysteine desulfurase SufS 1.00 KEDOAH_09350 ygiC Putative acid--amine ligase YgiC — —
Escherichia coli ECRC98 0.99 JDDGAC_01845 sufS cysteine desulfurase SufS 1.00 JDDGAC_22430 ygiC Putative acid--amine ligase YgiC low > 86
Escherichia coli ECOR27 0.98 NOLOHH_17790 sufS cysteine desulfurase SufS 1.00 NOLOHH_10600 ygiC Putative acid--amine ligase YgiC low > 75
Escherichia coli ECOR38 0.98 HEPCGN_05655 sufS cysteine desulfurase SufS 1.00 HEPCGN_17670 ygiC Putative acid--amine ligase YgiC low > 87
Escherichia coli Nissle 1917 0.98 ECOLIN_RS09395 cysteine desulfurase SufS 1.00 ECOLIN_RS17530 glutathionylspermidine synthase family protein — —
Escherichia fergusonii Becca 0.98 EFB2_02312 Cysteine desulfurase 1.00 EFB2_00771 Putative acid--amine ligase YgiC low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.89 GFF3562 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily 0.95 GFF3151 Similarity with glutathionylspermidine synthase (EC 6.3.1.8), group 1 low > 78
Klebsiella michiganensis M5al 0.85 BWI76_RS16980 bifunctional cysteine desulfurase/selenocysteine lyase 0.91 BWI76_RS24410 putative glutathione-like synthetase low > 92
Enterobacter asburiae PDN3 0.85 EX28DRAFT_1683 cysteine desulfurases, SufSfamily 0.93 EX28DRAFT_3075 Glutathionylspermidine synthase low > 76
Enterobacter sp. TBS_079 0.84 MPMX20_01947 Cysteine desulfurase 0.93 MPMX20_03884 Putative acid--amine ligase YgiC low > 85
Pantoea sp. MT58 0.74 IAI47_10860 cysteine desulfurase SufS 0.83 IAI47_03125 glutathionylspermidine synthase family protein — —
Serratia liquefaciens MT49 0.74 IAI46_11165 cysteine desulfurase SufS 0.82 IAI46_21985 glutathionylspermidine synthase family protein low > 86
Pectobacterium carotovorum WPP14 0.73 HER17_RS08940 cysteine desulfurase SufS 0.80 HER17_RS19835 glutathionylspermidine synthase family protein low > 75
Rahnella sp. WP5 0.72 EX31_RS13890 cysteine desulfurase SufS 0.81 EX31_RS08110 glutathionylspermidine synthase family protein — —
Erwinia amylovora T8 0.72 OLJFJH_14575 cysteine desulfurase SufS 0.82 OLJFJH_07665 Putative acid--amine ligase YgiC — —
Erwinia tracheiphila SCR3 0.71 LU632_RS11075 sufS cysteine desulfurase SufS 0.81 LU632_RS20645 glutathionylspermidine synthase family protein — —
Dickeya dadantii 3937 0.70 DDA3937_RS12760 cysteine desulfurase SufS 0.78 DDA3937_RS01730 glutathionylspermidine synthase family protein low > 74
Dickeya dianthicola 67-19 0.70 HGI48_RS12825 cysteine desulfurase SufS 0.76 HGI48_RS01625 glutathionylspermidine synthase family protein 0.44 52
Dickeya dianthicola ME23 0.70 DZA65_RS13290 cysteine desulfurase SufS 0.76 DZA65_RS01700 glutathionylspermidine synthase family protein low > 75
Phocaeicola dorei CL03T12C01 0.52 ABI39_RS04575 cysteine desulfurase 0.31 ABI39_RS17785 glutathionylspermidine synthase family protein — —
Phocaeicola vulgatus CL09T03C04 0.52 HMPREF1058_RS12220 cysteine desulfurase 0.31 HMPREF1058_RS03255 glutathionylspermidine synthase family protein — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.51 CA264_08285 aminotransferase 0.16 CA264_01695 glutathionylspermidine synthase low > 74
Azospirillum brasilense Sp245 0.50 AZOBR_RS14845 cysteine desulfurase 0.19 AZOBR_RS30590 glutathionylspermidine synthase — —
Azospirillum sp. SherDot2 0.49 MPMX19_04833 Cysteine desulfurase 0.35 MPMX19_03475 Putative acid--amine ligase YgiC — —
Synechocystis sp000284455 PCC 6803 0.47 SGL_RS15265 SufS family cysteine desulfurase 0.19 SGL_RS13355 glutathionylspermidine synthase family protein — —
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.1697.1 Cysteine desulfurase (EC 2.8.1.7), SufS subfamily 0.49 Xcc-8004.1624.1 synthetase/amidase — —
Caulobacter crescentus NA1000 Δfur 0.46 CCNA_01936 cysteine desulfurase/selenocysteine lyase 0.47 CCNA_02446 glutathionylspermidine synthase family — —
Alteromonas macleodii MIT1002 0.46 MIT1002_02797 putative cysteine desulfurase 0.62 MIT1002_02822 Bifunctional glutathionylspermidine synthetase/amidase — —
Caulobacter crescentus NA1000 0.46 CCNA_01936 cysteine desulfurase/selenocysteine lyase 0.47 CCNA_02446 glutathionylspermidine synthase family — —
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS09460 cysteine desulfurase 0.48 ABZR86_RS16900 glutathionylspermidine synthase family protein — —
Bosea sp. OAE506 0.45 ABIE41_RS16975 cysteine desulfurase 0.45 ABIE41_RS15770 glutathionylspermidine synthase family protein — —
Rhodanobacter sp000427505 FW510-R12 0.45 LRK53_RS06890 cysteine desulfurase 0.48 LRK53_RS01490 glutathionylspermidine synthase family protein — —
Rhodanobacter sp. FW510-T8 0.45 OKGIIK_09950 sufS,csdA cysteine desulfurase CsdA 0.47 OKGIIK_16720 gsp GSP-synth domain-containing protein — —
Rhodanobacter denitrificans FW104-10B01 0.45 LRK54_RS03080 cysteine desulfurase 0.48 LRK54_RS06910 glutathionylspermidine synthase family protein — —
Rhodanobacter denitrificans MT42 0.44 LRK55_RS02830 cysteine desulfurase 0.48 LRK55_RS06655 glutathionylspermidine synthase family protein — —
Sphingomonas koreensis DSMZ 15582 0.44 Ga0059261_1475 cysteine desulfurases, SufSfamily 0.36 Ga0059261_0681 Glutathionylspermidine synthase — —
Cupriavidus basilensis FW507-4G11 0.23 RR42_RS21580 cysteine desulfurase 0.35 RR42_RS31000 glutathionylspermidine synthase low > 128

Not shown: 25 genomes with orthologs for ECD_01649 only; 2 genomes with orthologs for ECD_02910 only