Conservation of cofitness between ECD_00354 and ECD_02900 in Escherichia coli BL21

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00354 tRNA-guanine transglycosylase 1.0 ECD_02900 NADPH quinone reductase low > 61
Escherichia coli ECRC98 1.00 JDDGAC_12160 tgt tRNA guanosine(34) transglycosylase Tgt 1.00 JDDGAC_22505 mdaB NADPH:quinone oxidoreductase MdaB low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03270 Queuine tRNA-ribosyltransferase 1.00 OHPLBJKB_00675 Modulator of drug activity B low > 73
Escherichia coli Nissle 1917 1.00 ECOLIN_RS02445 tRNA guanosine(34) transglycosylase Tgt 1.00 ECOLIN_RS17450 NADPH:quinone oxidoreductase MdaB — —
Escherichia fergusonii Becca 1.00 EFB2_03651 Queuine tRNA-ribosyltransferase 1.00 EFB2_00786 NADPH:quinone oxidoreductase MdaB low > 86
Escherichia coli ECRC100 1.00 OKFHMN_08505 tgt tRNA guanosine(34) transglycosylase Tgt 1.00 OKFHMN_18870 mdaB NADPH:quinone oxidoreductase MdaB low > 80
Escherichia coli BW25113 1.00 b0406 tgt queuine tRNA-ribosyltransferase (NCBI) 1.00 b3028 mdaB NADPH quinone reductase (NCBI) low > 76
Escherichia coli ECRC99 1.00 KEDOAH_19460 tgt tRNA guanosine(34) transglycosylase Tgt 1.00 KEDOAH_09275 mdaB NADPH:quinone oxidoreductase MdaB — —
Escherichia coli ECRC62 1.00 BNILDI_22855 tgt tRNA guanosine(34) transglycosylase Tgt 1.00 BNILDI_00870 mdaB NADPH:quinone oxidoreductase MdaB low > 75
Escherichia coli ECRC102 1.00 NIAGMN_06560 tgt tRNA guanosine(34) transglycosylase Tgt 1.00 NIAGMN_16635 mdaB NADPH:quinone oxidoreductase MdaB — —
Escherichia coli ECOR27 1.00 NOLOHH_01440 tgt tRNA guanosine(34) transglycosylase Tgt 1.00 NOLOHH_10645 mdaB NADPH:quinone oxidoreductase MdaB low > 75
Escherichia coli ECOR38 1.00 HEPCGN_07145 tgt tRNA guanosine(34) transglycosylase Tgt 1.00 HEPCGN_17715 mdaB NADPH:quinone oxidoreductase MdaB low > 87
Escherichia coli ECRC101 1.00 MCAODC_27730 tgt tRNA guanosine(34) transglycosylase Tgt 1.00 MCAODC_09385 mdaB NADPH:quinone oxidoreductase MdaB low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.98 GFF4305 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.93 GFF3141 Modulator of drug activity B low > 78
Enterobacter asburiae PDN3 0.98 EX28DRAFT_2565 tRNA-guanine transglycosylase 0.90 EX28DRAFT_3059 Putative NADPH-quinone reductase (modulator of drug activity B) low > 76
Enterobacter sp. TBS_079 0.98 MPMX20_00997 Queuine tRNA-ribosyltransferase 0.91 MPMX20_03865 NADPH:quinone oxidoreductase MdaB low > 85
Klebsiella michiganensis M5al 0.98 BWI76_RS06300 tRNA guanosine(34) transglycosylase Tgt 0.93 BWI76_RS24345 NADPH quinone reductase MdaB — —
Pantoea sp. MT58 0.95 IAI47_14805 tRNA guanosine(34) transglycosylase Tgt 0.73 IAI47_03175 NAD(P)H-dependent oxidoreductase low > 76
Dickeya dadantii 3937 0.92 DDA3937_RS05470 tRNA guanosine(34) transglycosylase Tgt 0.74 DDA3937_RS01775 NAD(P)H-dependent oxidoreductase low > 74
Dickeya dianthicola ME23 0.92 DZA65_RS05855 tRNA guanosine(34) transglycosylase Tgt 0.73 DZA65_RS01745 NAD(P)H-dependent oxidoreductase low > 75
Pectobacterium carotovorum WPP14 0.92 HER17_RS15990 tRNA guanosine(34) transglycosylase Tgt 0.73 HER17_RS19790 NAD(P)H-dependent oxidoreductase low > 75
Dickeya dianthicola 67-19 0.92 HGI48_RS05530 tRNA guanosine(34) transglycosylase Tgt 0.73 HGI48_RS01670 NAD(P)H-dependent oxidoreductase low > 71
Rahnella sp. WP5 0.91 EX31_RS22095 tRNA guanosine(34) transglycosylase Tgt 0.71 EX31_RS08065 NAD(P)H-dependent oxidoreductase low > 89
Serratia liquefaciens MT49 0.91 IAI46_04840 tRNA guanosine(34) transglycosylase Tgt 0.75 IAI46_21905 NAD(P)H-dependent oxidoreductase low > 86
Pseudomonas sp. S08-1 0.74 OH686_17430 tRNA-guanine transglycosylase 0.64 OH686_20250 Modulator of drug activity B low > 80
Pseudomonas stutzeri RCH2 0.72 Psest_1242 tRNA-guanine transglycosylase, queuosine-34-forming 0.64 Psest_4206 Putative NADPH-quinone reductase (modulator of drug activity B) low > 67
Pseudomonas sp. RS175 0.72 PFR28_00277 Queuine tRNA-ribosyltransferase 0.63 PFR28_00025 NADPH:quinone oxidoreductase MdaB low > 88
Pseudomonas fluorescens FW300-N2E3 0.72 AO353_15790 queuine tRNA-ribosyltransferase 0.64 AO353_05910 NADPH quinone reductase MdaB — —
Pseudomonas fluorescens GW456-L13 0.72 PfGW456L13_4882 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.64 PfGW456L13_5138 Modulator of drug activity B low > 87
Marinobacter adhaerens HP15 0.72 HP15_1479 queuine tRNA-ribosyltransferase 0.44 HP15_1685 NAD(P)H dehydrogenase (quinone) low > 73
Pseudomonas fluorescens FW300-N1B4 0.72 Pf1N1B4_3006 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.64 Pf1N1B4_1208 Modulator of drug activity B low > 87
Pseudomonas putida KT2440 0.72 PP_0833 queuine tRNA-ribosyltransferase 0.65 PP_4661 modulator of drug activity B low > 96
Pseudomonas fluorescens FW300-N2C3 0.72 AO356_06690 queuine tRNA-ribosyltransferase 0.65 AO356_07810 NADPH quinone reductase MdaB low > 104
Pseudomonas fluorescens FW300-N2E2 0.72 Pf6N2E2_3198 tRNA-guanine transglycosylase (EC 2.4.2.29) 0.64 Pf6N2E2_3446 Modulator of drug activity B low > 103
Pseudomonas simiae WCS417 0.71 PS417_23245 queuine tRNA-ribosyltransferase 0.64 PS417_23630 NADPH quinone reductase MdaB — —
Ralstonia solanacearum GMI1000 0.62 RS_RS13575 tRNA guanosine(34) transglycosylase Tgt 0.38 RS_RS11685 flavodoxin family protein low > 80
Desulfovibrio vulgaris Hildenborough JW710 0.52 DVU0726 tgt queuine tRNA-ribosyltransferase (TIGR) 0.47 DVU3135 mdaB flavodoxin-like fold domain protein (TIGR) low > 55
Desulfovibrio vulgaris Miyazaki F 0.52 DvMF_2757 tgt queuine tRNA-ribosyltransferase (RefSeq) 0.46 DvMF_2140 NAD(P)H dehydrogenase (quinone) (RefSeq) low > 51
Pedobacter sp. GW460-11-11-14-LB5 0.46 CA265_RS13030 tRNA guanosine(34) transglycosylase Tgt 0.41 CA265_RS22290 NADPH quinone reductase MdaB low > 88

Not shown: 61 genomes with orthologs for ECD_00354 only; 0 genomes with orthologs for ECD_02900 only