Conservation of cofitness between ECD_02518 and ECD_02792 in Escherichia coli BL21

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02518 4-aminobutyrate aminotransferase, PLP-dependent 1.0 ECD_02792 oxidative damage protective factor for iron-sulfur proteins 0.60 9
Escherichia coli ECRC98 0.99 JDDGAC_24570 gabT 4-aminobutyrate--2-oxoglutarate transaminase 1.00 JDDGAC_22825 yggX oxidative damage protection protein low > 86
Escherichia coli ECRC101 0.99 MCAODC_11430 gabT 4-aminobutyrate--2-oxoglutarate transaminase 1.00 MCAODC_09715 yggX oxidative damage protection protein low > 87
Escherichia coli ECRC99 0.99 KEDOAH_07230 gabT 4-aminobutyrate--2-oxoglutarate transaminase 1.00 KEDOAH_08945 yggX oxidative damage protection protein
Escherichia coli ECRC102 0.99 NIAGMN_18675 gabT 4-aminobutyrate--2-oxoglutarate transaminase 1.00 NIAGMN_16960 yggX oxidative damage protection protein
Escherichia coli ECRC100 0.99 OKFHMN_20910 gabT 4-aminobutyrate--2-oxoglutarate transaminase 1.00 OKFHMN_19195 yggX oxidative damage protection protein low > 80
Escherichia coli BW25113 0.99 b2662 gabT 4-aminobutyrate aminotransferase (NCBI) 1.00 b2962 yggX hypothetical protein (NCBI) low > 76
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14845 4-aminobutyrate--2-oxoglutarate transaminase 0.99 ECOLIN_RS16475 oxidative damage protection protein low > 55
Escherichia fergusonii Becca 0.99 EFB2_01268 4-aminobutyrate aminotransferase GabT 1.00 EFB2_00940 putative Fe(2+)-trafficking protein low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01070 4-aminobutyrate aminotransferase GabT 1.00 OHPLBJKB_00754 putative Fe(2+)-trafficking protein low > 73
Escherichia coli ECOR27 0.99 NOLOHH_12735 gabT 4-aminobutyrate--2-oxoglutarate transaminase 1.00 NOLOHH_11055 yggX oxidative damage protection protein low > 75
Escherichia coli ECRC62 0.99 BNILDI_11295 gabT 4-aminobutyrate--2-oxoglutarate transaminase 1.00 BNILDI_09640 yggX oxidative damage protection protein low > 75
Escherichia coli ECOR38 0.98 HEPCGN_20155 gabT 4-aminobutyrate--2-oxoglutarate transaminase 1.00 HEPCGN_18465 yggX oxidative damage protection protein low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.90 GFF1567 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.97 GFF3066 FIG001341: Probable Fe(2+)-trafficking protein YggX low > 78
Pseudomonas sp. S08-1 0.77 OH686_11880 4-aminobutyrate transaminase 0.48 OH686_14545 Probable Fe(2+)-trafficking protein YggX low > 80
Pseudomonas stutzeri RCH2 0.76 Psest_3653 4-aminobutyrate aminotransferase, prokaryotic type 0.46 Psest_0144 Fe-S cluster protector protein low > 67
Pseudomonas sp. RS175 0.74 PFR28_04756 5-aminovalerate aminotransferase DavT 0.44 PFR28_04924 putative Fe(2+)-trafficking protein low > 88
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS00915 4-aminobutyrate--2-oxoglutarate transaminase 0.43 PFLU_RS01585 oxidative damage protection protein low > 109
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_4013 5-aminovalerate transaminase (EC 2.6.1.48) (from data) 0.46 Pf6N2E2_3847 FIG001341: Probable Fe(2+)-trafficking protein YggX low > 103
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_10715 4-aminobutyrate aminotransferase 0.45 AO356_09835 iron transporter low > 104
Pseudomonas putida KT2440 0.73 PP_0214 4-aminobutyrate aminotransferase 0.47 PP_0285 Fe(2+)-trafficking protein
Pseudomonas fluorescens SBW25 0.73 PFLU_RS00915 4-aminobutyrate--2-oxoglutarate transaminase 0.43 PFLU_RS01585 oxidative damage protection protein low > 109
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_11510 5-aminovalerate transaminase (EC 2.6.1.48) (from data) 0.44 AO353_12045 iron transporter low > 101
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_494 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.43 PfGW456L13_367 FIG001341: Probable Fe(2+)-trafficking protein YggX low > 87
Pseudomonas simiae WCS417 0.73 PS417_00900 4-aminobutyrate aminotransferase 0.42 PS417_01540 iron transporter
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_1733 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.44 Pf1N1B4_1632 FIG001341: Probable Fe(2+)-trafficking protein YggX low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.72 Psyr_0090 4-aminobutyrate aminotransferase apoenzyme 0.48 Psyr_4902 Protein of unknown function DUF495 low > 86
Pseudomonas syringae pv. syringae B728a 0.72 Psyr_0090 4-aminobutyrate aminotransferase apoenzyme 0.48 Psyr_4902 Protein of unknown function DUF495 low > 86
Shewanella amazonensis SB2B 0.67 Sama_2636 gamma-aminobutyrate transaminase (EC 2.6.1.19) (from data) 0.73 Sama_2491 hypothetical protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.66 Shewana3_3091 4-aminobutyrate aminotransferase (RefSeq) 0.71 Shewana3_1180 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.66 SO1276 gabT 4-aminobutyrate aminotransferase (NCBI ptt file) 0.71 SO3369 conserved hypothetical protein (NCBI ptt file) low > 76
Variovorax sp. OAS795 0.64 ABID97_RS21585 4-aminobutyrate--2-oxoglutarate transaminase 0.46 ABID97_RS15460 oxidative damage protection protein
Acidovorax sp. GW101-3H11 0.62 Ac3H11_4179 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.48 Ac3H11_580 FIG001341: Probable Fe(2+)-trafficking protein YggX
Shewanella loihica PV-4 0.51 Shew_3172 4-aminobutyrate aminotransferase (RefSeq) 0.72 Shew_1122 hypothetical protein (RefSeq) low > 60
Marinobacter adhaerens HP15 0.50 HP15_3708 4-aminobutyrate aminotransferase 0.45 HP15_3016 Ion traffic superfamily protein low > 73
Lysobacter sp. OAE881 0.25 ABIE51_RS02780 aspartate aminotransferase family protein 0.55 ABIE51_RS15145 oxidative damage protection protein

Not shown: 1 genomes with orthologs for ECD_02518 only; 35 genomes with orthologs for ECD_02792 only