Conservation of cofitness between ECD_02518 and ECD_02780 in Escherichia coli BL21

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02518 4-aminobutyrate aminotransferase, PLP-dependent 1.0 ECD_02780 putative PilT family AAA+ ATPase 0.59 11
Escherichia coli ECRC102 0.99 NIAGMN_18675 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.98 NIAGMN_17025 yggR Uncharacterized protein YggR — —
Escherichia coli ECRC98 0.99 JDDGAC_24570 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.98 JDDGAC_22890 yggR Uncharacterized protein YggR low > 86
Escherichia coli ECRC100 0.99 OKFHMN_20910 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.98 OKFHMN_19260 yggR Uncharacterized protein YggR low > 80
Escherichia coli ECRC99 0.99 KEDOAH_07230 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.98 KEDOAH_08880 yggR Uncharacterized protein YggR — —
Escherichia coli ECRC101 0.99 MCAODC_11430 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.98 MCAODC_09780 yggR Uncharacterized protein YggR low > 87
Escherichia coli BW25113 0.99 b2662 gabT 4-aminobutyrate aminotransferase (NCBI) 1.00 b2950 yggR putative protein transport (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01070 4-aminobutyrate aminotransferase GabT 0.98 OHPLBJKB_00766 putative protein YggR low > 73
Escherichia coli ECOR27 0.99 NOLOHH_12735 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.98 NOLOHH_11130 yggR Uncharacterized protein YggR low > 75
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14845 4-aminobutyrate--2-oxoglutarate transaminase 0.97 ECOLIN_RS16410 type IV pilus twitching motility protein PilT low > 55
Escherichia fergusonii Becca 0.99 EFB2_01268 4-aminobutyrate aminotransferase GabT 0.97 EFB2_00952 putative protein YggR low > 86
Escherichia coli ECRC62 0.99 BNILDI_11295 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.98 BNILDI_09710 yggR Uncharacterized protein YggR low > 75
Escherichia coli ECOR38 0.98 HEPCGN_20155 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.98 HEPCGN_18565 yggR Uncharacterized protein YggR low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.90 GFF1567 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.79 GFF3053 Twitching motility protein PilT low > 78
Pseudomonas sp. S08-1 0.77 OH686_11880 4-aminobutyrate transaminase 0.43 OH686_10970 Twitching motility protein PilT low > 80
Pseudomonas stutzeri RCH2 0.76 Psest_3653 4-aminobutyrate aminotransferase, prokaryotic type 0.43 Psest_0285 pilus retraction protein PilT low > 67
Pseudomonas sp. RS175 0.74 PFR28_04756 5-aminovalerate aminotransferase DavT 0.43 PFR28_04241 Twitching mobility protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_4013 5-aminovalerate transaminase (EC 2.6.1.48) (from data) 0.43 Pf6N2E2_4602 Twitching motility protein PilT low > 103
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS00915 4-aminobutyrate--2-oxoglutarate transaminase 0.43 PFLU_RS28365 type IV pilus twitching motility protein PilT low > 109
Pseudomonas putida KT2440 0.73 PP_0214 4-aminobutyrate aminotransferase 0.39 PP_5093 twitching motility protein low > 96
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_10715 4-aminobutyrate aminotransferase 0.43 AO356_13430 twitching motility protein PilT low > 104
Pseudomonas fluorescens SBW25 0.73 PFLU_RS00915 4-aminobutyrate--2-oxoglutarate transaminase 0.43 PFLU_RS28365 type IV pilus twitching motility protein PilT low > 109
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_494 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.43 PfGW456L13_1012 Twitching motility protein PilT low > 87
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_11510 5-aminovalerate transaminase (EC 2.6.1.48) (from data) 0.44 AO353_08155 twitching motility protein PilT low > 101
Pseudomonas simiae WCS417 0.73 PS417_00900 4-aminobutyrate aminotransferase 0.43 PS417_26720 twitching motility protein PilT low > 88
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_1733 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.43 Pf1N1B4_2343 Twitching motility protein PilT low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.72 Psyr_0090 4-aminobutyrate aminotransferase apoenzyme 0.45 Psyr_0478 pilus retraction ATPase PilT low > 86
Pseudomonas syringae pv. syringae B728a 0.72 Psyr_0090 4-aminobutyrate aminotransferase apoenzyme 0.45 Psyr_0478 pilus retraction ATPase PilT low > 86
Shewanella amazonensis SB2B 0.67 Sama_2636 gamma-aminobutyrate transaminase (EC 2.6.1.19) (from data) 0.46 Sama_2476 twitching motility protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.66 Shewana3_3091 4-aminobutyrate aminotransferase (RefSeq) 0.46 Shewana3_1195 pilus retraction ATPase PilT (RefSeq) low > 73
Shewanella oneidensis MR-1 0.66 SO1276 gabT 4-aminobutyrate aminotransferase (NCBI ptt file) 0.46 SO3351 pilT twitching motility protein PilT (NCBI ptt file) low > 76
Variovorax sp. OAS795 0.64 ABID97_RS21585 4-aminobutyrate--2-oxoglutarate transaminase 0.45 ABID97_RS00255 type IV pilus twitching motility protein PilT low > 91
Acidovorax sp. GW101-3H11 0.62 Ac3H11_4179 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.44 Ac3H11_4473 Twitching motility protein PilT low > 79
Shewanella loihica PV-4 0.51 Shew_3172 4-aminobutyrate aminotransferase (RefSeq) 0.45 Shew_1138 twitching motility protein (RefSeq) low > 60
Marinobacter adhaerens HP15 0.50 HP15_3708 4-aminobutyrate aminotransferase 0.43 HP15_289 twitching motility protein PilT low > 73
Lysobacter sp. OAE881 0.25 ABIE51_RS02780 aspartate aminotransferase family protein 0.45 ABIE51_RS16055 type IV pilus twitching motility protein PilT low > 62

Not shown: 1 genomes with orthologs for ECD_02518 only; 34 genomes with orthologs for ECD_02780 only