Conservation of cofitness between ECD_02753 and ECD_02731 in Escherichia coli BL21

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02753 oxidative stress defense protein 1.0 ECD_02731 hemolysin III family HylIII inner membrane protein 0.78 7
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00794 26 kDa periplasmic immunogenic protein 1.00 OHPLBJKB_00816 hypothetical protein low > 73
Escherichia coli BW25113 1.00 b2922 yggE hypothetical protein (NCBI) 1.00 b2899 yqfA predicted oxidoreductase, inner membrane subunit (NCBI) low > 76
Escherichia coli ECRC62 0.99 BNILDI_09860 yggE oxidative stress defense protein 1.00 BNILDI_10000 yqfA hemolysin III family protein low > 75
Escherichia coli ECRC99 0.99 KEDOAH_08725 yggE oxidative stress defense protein 1.00 KEDOAH_08595 yqfA hemolysin III family protein
Escherichia coli ECOR27 0.99 NOLOHH_11325 yggE oxidative stress defense protein 1.00 NOLOHH_11465 yqfA hemolysin III family protein low > 75
Escherichia coli ECRC100 0.99 OKFHMN_19415 yggE oxidative stress defense protein 1.00 OKFHMN_19545 yqfA hemolysin III family protein low > 80
Escherichia coli ECRC102 0.99 NIAGMN_17180 yggE oxidative stress defense protein 1.00 NIAGMN_17310 yqfA hemolysin III family protein
Escherichia coli ECOR38 0.99 HEPCGN_18720 yggE oxidative stress defense protein 1.00 HEPCGN_18835 yqfA hemolysin III family protein low > 87
Escherichia coli ECRC101 0.99 MCAODC_09935 yggE oxidative stress defense protein 1.00 MCAODC_10065 yqfA hemolysin III family protein low > 87
Escherichia coli ECRC98 0.99 JDDGAC_23045 yggE oxidative stress defense protein 1.00 JDDGAC_23185 yqfA hemolysin III family protein low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS16240 oxidative stress defense protein 1.00 ECOLIN_RS16150 hemolysin III family protein low > 55
Escherichia fergusonii Becca 0.98 EFB2_00984 26 kDa periplasmic immunogenic protein 1.00 EFB2_01002 hypothetical protein low > 86
Klebsiella michiganensis M5al 0.86 BWI76_RS23960 oxidative stress defense protein 0.93 BWI76_RS23840 hemolysin III family protein low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.82 GFF3017 Protein of unknown function DUF541 0.94 GFF2997 COG1272: Predicted membrane protein hemolysin III homolog low > 78
Enterobacter sp. TBS_079 0.80 MPMX20_03774 26 kDa periplasmic immunogenic protein 0.93 MPMX20_03758 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.80 EX28DRAFT_2968 Uncharacterized conserved protein 0.93 EX28DRAFT_2950 channel protein, hemolysin III family low > 76
Serratia liquefaciens MT49 0.65 IAI46_20915 oxidative stress defense protein 0.79 IAI46_20775 hemolysin III family protein low > 86
Rahnella sp. WP5 0.65 EX31_RS21445 oxidative stress defense protein 0.77 EX31_RS21610 hemolysin III family protein low > 89
Pectobacterium carotovorum WPP14 0.64 HER17_RS02710 oxidative stress defense protein 0.76 HER17_RS17935 hemolysin III family protein 0.40 72
Pantoea sp. MT58 0.63 IAI47_03710 oxidative stress defense protein 0.70 IAI47_03795 hemolysin III family protein 0.20 30
Dickeya dadantii 3937 0.63 DDA3937_RS18495 oxidative stress defense protein 0.84 DDA3937_RS03270 hemolysin III family protein low > 74
Dickeya dianthicola 67-19 0.60 HGI48_RS18420 oxidative stress defense protein 0.77 HGI48_RS03410 hemolysin III family protein low > 71
Dickeya dianthicola ME23 0.60 DZA65_RS19555 oxidative stress defense protein 0.77 DZA65_RS03455 hemolysin III family protein low > 75
Shewanella sp. ANA-3 0.29 Shewana3_3626 hypothetical protein (RefSeq) 0.47 Shewana3_1934 hemolysin III family channel protein (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.28 CSW01_02565 oxidative stress defense protein 0.66 CSW01_00205 hemolysin III family protein low > 62
Shewanella oneidensis MR-1 0.28 SO4070 conserved hypothetical protein (NCBI ptt file) 0.49 SO2447 channel protein, hemolysin III family subfamily (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.25 Shew_3168 hypothetical protein (RefSeq) 0.47 Shew_2098 hemolysin III family channel protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.24 Sama_3310 hypothetical protein (RefSeq) 0.44 Sama_1862 hemolysin III family channel protein (RefSeq) low > 62
Dinoroseobacter shibae DFL-12 0.18 Dshi_0791 protein of unknown function DUF541 (RefSeq) 0.27 Dshi_2910 Hly-III family protein (RefSeq) low > 64
Rhizobium sp. OAE497 0.17 ABIE40_RS12160 SIMPL domain-containing protein 0.34 ABIE40_RS04960 hemolysin III family protein low > 107
Sinorhizobium meliloti 1021 0.15 SMc01556 hypothetical protein 0.37 SMc00455 hypothetical protein low > 103
Xanthomonas campestris pv. campestris strain 8004 0.14 Xcc-8004.1878.1 Protein of unknown function DUF541 0.39 Xcc-8004.1589.1 COG1272: Predicted membrane protein hemolysin III homolog low > 74
Agrobacterium fabrum C58 0.14 Atu2162 periplasmic immunogenic protein 0.34 Atu0906 Hemolysin III low > 89
Rhodopseudomonas palustris CGA009 0.13 TX73_001290 SIMPL domain-containing protein 0.30 TX73_008140 hemolysin III family protein low > 86
Lysobacter sp. OAE881 0.13 ABIE51_RS06775 SIMPL domain-containing protein 0.39 ABIE51_RS16230 hemolysin III family protein low > 62

Not shown: 3 genomes with orthologs for ECD_02753 only; 47 genomes with orthologs for ECD_02731 only