Conservation of cofitness between ECD_02518 and ECD_02541 in Escherichia coli BL21

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02518 4-aminobutyrate aminotransferase, PLP-dependent 1.0 ECD_02541 multidrug efflux system protein 0.61 8
Escherichia coli ECRC100 0.99 OKFHMN_20910 gabT 4-aminobutyrate--2-oxoglutarate transaminase 1.00 OKFHMN_20775 emrB multidrug efflux MFS transporter permease subunit EmrB low > 80
Escherichia coli ECRC98 0.99 JDDGAC_24570 gabT 4-aminobutyrate--2-oxoglutarate transaminase 1.00 JDDGAC_24440 emrB multidrug efflux MFS transporter permease subunit EmrB low > 86
Escherichia coli ECRC99 0.99 KEDOAH_07230 gabT 4-aminobutyrate--2-oxoglutarate transaminase 1.00 KEDOAH_07360 emrB multidrug efflux MFS transporter permease subunit EmrB — —
Escherichia coli ECRC101 0.99 MCAODC_11430 gabT 4-aminobutyrate--2-oxoglutarate transaminase 1.00 MCAODC_11300 emrB multidrug efflux MFS transporter permease subunit EmrB low > 87
Escherichia coli ECRC102 0.99 NIAGMN_18675 gabT 4-aminobutyrate--2-oxoglutarate transaminase 1.00 NIAGMN_18545 emrB multidrug efflux MFS transporter permease subunit EmrB — —
Escherichia coli BW25113 0.99 b2662 gabT 4-aminobutyrate aminotransferase (NCBI) 1.00 b2686 emrB multidrug efflux system protein (NCBI) low > 76
Escherichia fergusonii Becca 0.99 EFB2_01268 4-aminobutyrate aminotransferase GabT 1.00 EFB2_01242 Multidrug export protein EmrB low > 86
Escherichia coli ECOR27 0.99 NOLOHH_12735 gabT 4-aminobutyrate--2-oxoglutarate transaminase 1.00 NOLOHH_12615 emrB multidrug efflux MFS transporter permease subunit EmrB low > 75
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14845 4-aminobutyrate--2-oxoglutarate transaminase 1.00 ECOLIN_RS14970 multidrug efflux MFS transporter permease subunit EmrB low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01070 4-aminobutyrate aminotransferase GabT 1.00 OHPLBJKB_01047 Multidrug export protein EmrB low > 73
Escherichia coli ECRC62 0.99 BNILDI_11295 gabT 4-aminobutyrate--2-oxoglutarate transaminase 1.00 BNILDI_11175 emrB multidrug efflux MFS transporter permease subunit EmrB low > 75
Escherichia coli ECOR38 0.98 HEPCGN_20155 gabT 4-aminobutyrate--2-oxoglutarate transaminase 1.00 HEPCGN_19970 emrB multidrug efflux MFS transporter permease subunit EmrB low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.90 GFF1567 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.95 GFF1593 Multidrug resistance protein B low > 78
Pseudomonas sp. S08-1 0.77 OH686_11880 4-aminobutyrate transaminase 0.23 OH686_04570 Inner-membrane proton/drug antiporter (MSF type) of tripartite multidrug efflux system low > 80
Pseudomonas sp. RS175 0.74 PFR28_04756 5-aminovalerate aminotransferase DavT 0.49 PFR28_02747 Multidrug export protein EmrB low > 88
Pseudomonas fluorescens SBW25 0.73 PFLU_RS00915 4-aminobutyrate--2-oxoglutarate transaminase 0.49 PFLU_RS18895 DHA2 family efflux MFS transporter permease subunit low > 109
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_4013 5-aminovalerate transaminase (EC 2.6.1.48) (from data) 0.48 Pf6N2E2_149 Inner membrane component of tripartite multidrug resistance system low > 103
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_10715 4-aminobutyrate aminotransferase 0.48 AO356_01025 multidrug resistance protein B low > 104
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS00915 4-aminobutyrate--2-oxoglutarate transaminase 0.49 PFLU_RS18895 DHA2 family efflux MFS transporter permease subunit low > 109
Pseudomonas putida KT2440 0.73 PP_0214 4-aminobutyrate aminotransferase 0.49 PP_3548 multidrug efflux transport system - permease subunit low > 96
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_494 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.49 PfGW456L13_2606 Inner membrane component of tripartite multidrug resistance system low > 87
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_11510 5-aminovalerate transaminase (EC 2.6.1.48) (from data) 0.49 AO353_27840 multidrug resistance protein B low > 101
Pseudomonas simiae WCS417 0.73 PS417_00900 4-aminobutyrate aminotransferase 0.49 PS417_16910 multidrug resistance protein B low > 88
Pseudomonas fluorescens FW300-N1B4 0.73 Pf1N1B4_1733 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.48 Pf1N1B4_4002 Inner membrane component of tripartite multidrug resistance system low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.72 Psyr_0090 4-aminobutyrate aminotransferase apoenzyme 0.48 Psyr_1731 Drug resistance transporter EmrB/QacA subfamily low > 86
Pseudomonas syringae pv. syringae B728a 0.72 Psyr_0090 4-aminobutyrate aminotransferase apoenzyme 0.48 Psyr_1731 Drug resistance transporter EmrB/QacA subfamily low > 86
Shewanella amazonensis SB2B 0.67 Sama_2636 gamma-aminobutyrate transaminase (EC 2.6.1.19) (from data) 0.23 Sama_0403 drug resistance transporter, EmrB/QacA family protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.66 Shewana3_3091 4-aminobutyrate aminotransferase (RefSeq) 0.29 Shewana3_2224 EmrB/QacA family drug resistance transporter (RefSeq) low > 73
Shewanella oneidensis MR-1 0.66 SO1276 gabT 4-aminobutyrate aminotransferase (NCBI ptt file) 0.23 SO0525 drug resistance transporter, EmrB/QacA family protein (NCBI ptt file) low > 76
Variovorax sp. OAS795 0.64 ABID97_RS21585 4-aminobutyrate--2-oxoglutarate transaminase 0.50 ABID97_RS20390 DHA2 family efflux MFS transporter permease subunit low > 91
Acidovorax sp. GW101-3H11 0.62 Ac3H11_4179 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.49 Ac3H11_2352 Inner membrane component of tripartite multidrug resistance system low > 79
Shewanella loihica PV-4 0.51 Shew_3172 4-aminobutyrate aminotransferase (RefSeq) 0.24 Shew_3405 EmrB/QacA family drug resistance transporter (RefSeq) low > 60
Rhodopseudomonas palustris CGA009 0.50 TX73_012015 4-aminobutyrate--2-oxoglutarate transaminase 0.41 TX73_019160 DHA2 family efflux MFS transporter permease subunit low > 86
Marinobacter adhaerens HP15 0.50 HP15_3708 4-aminobutyrate aminotransferase 0.14 HP15_3822 drug resistance transporter, EmrB/QacA family low > 73
Lysobacter sp. OAE881 0.25 ABIE51_RS02780 aspartate aminotransferase family protein 0.49 ABIE51_RS07705 DHA2 family efflux MFS transporter permease subunit low > 62

Not shown: 1 genomes with orthologs for ECD_02518 only; 49 genomes with orthologs for ECD_02541 only