Conservation of cofitness between ECD_02331 and ECD_00006 in Escherichia coli BL21

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02331 porphyrinogen oxidase, cytoplasmic 1.0 ECD_00006 peroxide resistance protein, lowers intracellular iron 0.73 3
Escherichia coli ECOR27 1.00 NOLOHH_13800 yfeX porphyrinogen peroxidase 0.99 NOLOHH_03420 yaaA peroxide stress protein YaaA low > 75
Escherichia coli ECRC62 1.00 BNILDI_12665 yfeX porphyrinogen peroxidase 1.00 BNILDI_08185 yaaA peroxide stress protein YaaA low > 75
Escherichia fergusonii Becca 1.00 EFB2_01448 Dye-decolorizing peroxidase YfeX 1.00 EFB2_04037 Peroxide stress resistance protein YaaA low > 86
Escherichia coli ECOR38 1.00 HEPCGN_21295 yfeX porphyrinogen peroxidase 1.00 HEPCGN_09095 yaaA peroxide stress protein YaaA low > 87
Escherichia coli BW25113 1.00 b2431 b2431 orf, hypothetical protein (VIMSS) 0.99 b0006 yaaA hypothetical protein (NCBI) 0.37 2
Escherichia coli Nissle 1917 1.00 ECOLIN_RS13940 porphyrinogen peroxidase 1.00 ECOLIN_RS00035 peroxide stress protein YaaA low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01291 putative deferrochelatase/peroxidase YfeX 1.00 OHPLBJKB_03654 hypothetical protein low > 73
Escherichia coli ECRC100 1.00 OKFHMN_22120 yfeX porphyrinogen peroxidase 1.00 OKFHMN_11090 yaaA peroxide stress protein YaaA low > 80
Escherichia coli ECRC101 1.00 MCAODC_12650 yfeX porphyrinogen peroxidase 1.00 MCAODC_01605 yaaA peroxide stress protein YaaA low > 87
Escherichia coli ECRC102 1.00 NIAGMN_19890 yfeX porphyrinogen peroxidase 1.00 NIAGMN_08940 yaaA peroxide stress protein YaaA — —
Escherichia coli ECRC98 1.00 JDDGAC_26070 yfeX porphyrinogen peroxidase 1.00 JDDGAC_14685 yaaA peroxide stress protein YaaA low > 86
Escherichia coli ECRC99 1.00 KEDOAH_06100 yfeX porphyrinogen peroxidase 1.00 KEDOAH_17065 yaaA peroxide stress protein YaaA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF2061 Predicted dye-decolorizing peroxidase (DyP), YfeX-like subgroup 0.87 GFF1081 UPF0246 protein YaaA 0.77 5
Enterobacter asburiae PDN3 0.93 EX28DRAFT_0204 Dyp-type peroxidase family 0.88 EX28DRAFT_3618 Uncharacterized protein conserved in bacteria low > 76
Enterobacter sp. TBS_079 0.92 MPMX20_03318 Dye-decolorizing peroxidase YfeX 0.87 MPMX20_00714 Peroxide stress resistance protein YaaA low > 85
Klebsiella michiganensis M5al 0.91 BWI76_RS20710 dyp-type peroxidase family protein 0.85 BWI76_RS04260 peroxide stress protein YaaA low > 92
Rahnella sp. WP5 0.69 EX31_RS20230 Dyp-type peroxidase 0.75 EX31_RS03930 peroxide stress protein YaaA low > 89
Dickeya dadantii 3937 0.68 DDA3937_RS04420 Dyp-type peroxidase 0.76 DDA3937_RS18400 peroxide stress protein YaaA low > 74
Dickeya dianthicola 67-19 0.68 HGI48_RS04395 Dyp-type peroxidase 0.75 HGI48_RS18330 peroxide stress protein YaaA low > 71
Serratia liquefaciens MT49 0.68 IAI46_18515 Dyp-type peroxidase 0.79 IAI46_03045 peroxide stress protein YaaA low > 86
Dickeya dianthicola ME23 0.68 DZA65_RS04310 Dyp-type peroxidase 0.76 DZA65_RS19470 peroxide stress protein YaaA low > 75
Pectobacterium carotovorum WPP14 0.67 HER17_RS17230 Dyp-type peroxidase 0.81 HER17_RS02810 peroxide stress protein YaaA low > 75
Vibrio cholerae E7946 ATCC 55056 0.40 CSW01_10710 deferrochelatase 0.69 CSW01_11930 peroxide stress protein YaaA low > 62
Shewanella oneidensis MR-1 0.32 SO0740 melanin biosynthesis protein TyrA, putative (NCBI ptt file) 0.57 SO3540 conserved hypothetical protein (NCBI ptt file) 0.63 5
Shewanella amazonensis SB2B 0.32 Sama_0670 melanin biosynthesis protein TyrA, putative (RefSeq) 0.62 Sama_0917 hypothetical protein (RefSeq) low > 62
Acinetobacter radioresistens SK82 0.31 MPMX26_00092 Dye-decolorizing peroxidase YfeX 0.67 MPMX26_02017 Peroxide stress resistance protein YaaA low > 36
Shewanella loihica PV-4 0.31 Shew_0864 Dyp-type peroxidase family protein (RefSeq) 0.64 Shew_1093 hypothetical protein (RefSeq) — —
Shewanella sp. ANA-3 0.31 Shewana3_3513 Dyp-type peroxidase family protein (RefSeq) 0.57 Shewana3_3143 hypothetical protein (RefSeq) 0.32 64
Burkholderia phytofirmans PsJN 0.28 BPHYT_RS30665 peroxidase 0.57 BPHYT_RS06780 hypothetical protein low > 109
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_25350 peroxidase 0.65 AO353_04675 hypothetical protein low > 101
Paraburkholderia sabiae LMG 24235 0.27 QEN71_RS09545 Dyp-type peroxidase 0.58 QEN71_RS24000 peroxide stress protein YaaA low > 153
Paraburkholderia bryophila 376MFSha3.1 0.27 H281DRAFT_06452 putative iron-dependent peroxidase 0.59 H281DRAFT_04599 hypothetical protein low > 103
Pseudomonas simiae WCS417 0.26 PS417_11115 peroxidase 0.63 PS417_04850 hypothetical protein low > 88
Bacteroides ovatus ATCC 8483 0.25 BACOVA_00506 Dyp-type peroxidase family protein 0.29 BACOVA_00355 hypothetical protein low > 94
Bacteroides thetaiotaomicron VPI-5482 0.24 BT1219 conserved hypothetical protein (NCBI ptt file) 0.30 BT3869 conserved hypothetical protein (NCBI ptt file) low > 81
Paraburkholderia graminis OAS925 0.23 ABIE53_006344 putative iron-dependent peroxidase 0.59 ABIE53_001622 cytoplasmic iron level regulating protein YaaA (DUF328/UPF0246 family) low > 113
Alteromonas macleodii MIT1002 0.23 MIT1002_00420 putative deferrochelatase/peroxidase YfeX 0.58 MIT1002_03077 hypothetical protein low > 70
Pseudomonas fluorescens SBW25-INTG 0.17 PFLU_RS18740 Dyp-type peroxidase 0.63 PFLU_RS04920 peroxide stress protein YaaA low > 109
Pseudomonas fluorescens SBW25 0.17 PFLU_RS18740 Dyp-type peroxidase 0.63 PFLU_RS04920 peroxide stress protein YaaA low > 109
Hydrogenophaga sp. GW460-11-11-14-LB1 0.16 GFF4790 Predicted dye-decolorizing peroxidase (DyP), YfeX-like subgroup 0.53 GFF720 UPF0246 protein YaaA low > 90

Not shown: 5 genomes with orthologs for ECD_02331 only; 34 genomes with orthologs for ECD_00006 only