Conservation of cofitness between DZA65_RS12330 and DZA65_RS07055 in Dickeya dianthicola ME23

28 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola ME23 1.0 DZA65_RS12330 TetR family transcriptional regulator 1.0 DZA65_RS07055 iron-sulfur cluster carrier protein ApbC 0.40 7
Dickeya dianthicola 67-19 0.95 HGI48_RS11790 TetR family transcriptional regulator 1.00 HGI48_RS06700 iron-sulfur cluster carrier protein ApbC low > 71
Pectobacterium carotovorum WPP14 0.70 HER17_RS16470 TetR/AcrR family transcriptional regulator 0.91 HER17_RS14655 iron-sulfur cluster carrier protein ApbC low > 75
Hydrogenophaga sp. GW460-11-11-14-LB1 0.33 GFF2284 transcriptional regulator, TetR family 0.42 GFF1207 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like
Castellaniella sp019104865 MT123 0.25 ABCV34_RS11390 TetR/AcrR family transcriptional regulator 0.46 ABCV34_RS08920 iron-sulfur cluster carrier protein ApbC
Shewanella amazonensis SB2B 0.24 Sama_1816 TetR family transcriptional regulator (RefSeq) 0.47 Sama_2048 ATP-binding Mrp/Nbp35 family protein (RefSeq) low > 62
Shewanella loihica PV-4 0.23 Shew_2052 TetR family transcriptional regulator (RefSeq) 0.43 Shew_1574 ATP-binding Mrp/Nbp35 family protein (RefSeq) low > 60
Marinobacter adhaerens HP15 0.22 HP15_2262 transcriptional Regulator, TetR family protein 0.48 HP15_1293 iron sulfur binding protein low > 73
Kangiella aquimarina DSM 16071 0.21 B158DRAFT_2232 transcriptional regulator, TetR family 0.45 B158DRAFT_2380 ATPases involved in chromosome partitioning
Shewanella sp. ANA-3 0.20 Shewana3_2155 TetR family transcriptional regulator (RefSeq) 0.48 Shewana3_1761 ATP-binding Mrp/Nbp35 family protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.20 SO2493 transcriptional regulator, TetR family (NCBI ptt file) 0.48 SO2618 ATP-binding protein, Mrp/Nbp35 family (NCBI ptt file) low > 76
Pseudomonas fluorescens SBW25 0.19 PFLU_RS18755 TetR/AcrR family transcriptional regulator 0.42 PFLU_RS05755 iron-sulfur cluster carrier protein ApbC
Pseudomonas simiae WCS417 0.19 PS417_16745 TetR family transcriptional regulator 0.41 PS417_05670 ATP-binding protein
Pseudomonas fluorescens SBW25-INTG 0.19 PFLU_RS18755 TetR/AcrR family transcriptional regulator 0.42 PFLU_RS05755 iron-sulfur cluster carrier protein ApbC
Pseudomonas syringae pv. syringae B728a ΔmexB 0.19 Psyr_3282 transcriptional regulator, TetR family 0.43 Psyr_3885 ParA family protein
Pseudomonas syringae pv. syringae B728a 0.19 Psyr_3282 transcriptional regulator, TetR family 0.43 Psyr_3885 ParA family protein
Pseudomonas stutzeri RCH2 0.18 Psest_2645 Transcriptional regulator 0.42 Psest_3046 ATPases involved in chromosome partitioning
Vibrio cholerae E7946 ATCC 55056 0.18 CSW01_08745 TetR/AcrR family transcriptional regulator 0.49 CSW01_05270 iron-sulfur cluster carrier protein ApbC low > 62
Pseudomonas fluorescens GW456-L13 0.18 PfGW456L13_4033 Predicted transcriptional regulator for fatty acid degradation FadQ, TetR family 0.42 PfGW456L13_1760 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like
Pseudomonas fluorescens FW300-N1B4 0.18 Pf1N1B4_3911 Predicted transcriptional regulator for fatty acid degradation FadQ, TetR family 0.44 Pf1N1B4_731 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like 0.36 23
Pseudomonas fluorescens FW300-N2E3 0.18 AO353_00460 TetR family transcriptional regulator 0.42 AO353_04050 ATP-binding protein
Pseudomonas putida KT2440 0.18 PP_2144 Transcriptional regulator, TetR family 0.42 PP_1098 ATP-dependent Fe-S cluster transferase
Pseudomonas fluorescens FW300-N2C3 0.18 AO356_02290 TetR family transcriptional regulator 0.42 AO356_18380 ATP-binding protein
Pseudomonas fluorescens FW300-N2E2 0.18 Pf6N2E2_2282 Predicted transcriptional regulator for fatty acid degradation FadQ, TetR family 0.42 Pf6N2E2_5602 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like
Pseudomonas sp. RS175 0.18 PFR28_01118 hypothetical protein 0.42 PFR28_03342 Iron-sulfur cluster carrier protein
Acidovorax sp. GW101-3H11 0.17 Ac3H11_3712 Transcriptional regulator, TetR family 0.42 Ac3H11_3814 Scaffold protein for [4Fe-4S] cluster assembly ApbC, MRP-like
Pseudomonas sp. S08-1 0.17 OH686_21965 Predicted transcriptional regulator for fatty acid degradation FadQ, TetR family 0.40 OH686_03855 [4Fe-4S] cluster assembly scaffold protein Mrp (ApbC)
Alteromonas macleodii MIT1002 0.17 MIT1002_01970 Stress response protein YttP 0.41 MIT1002_02490 Flagellum site-determining protein YlxH low > 70
Variovorax sp. OAS795 0.16 ABID97_RS03175 TetR/AcrR family transcriptional regulator 0.43 ABID97_RS07500 iron-sulfur cluster carrier protein ApbC low > 91

Not shown: 11 genomes with orthologs for DZA65_RS12330 only; 40 genomes with orthologs for DZA65_RS07055 only