Conservation of cofitness between CSW01_12820 and CSW01_19005 in Vibrio cholerae E7946 ATCC 55056

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12820 ribosome hibernation promoting factor 1.0 CSW01_19005 amino acid ABC transporter substrate-binding protein 0.46 16
Marinobacter adhaerens HP15 0.67 HP15_2443 sigma 54 modulation protein/ribosomal protein S30EA 0.16 HP15_2907 extracellular solute-binding protein, family 3 low > 73
Shewanella amazonensis SB2B 0.64 Sama_3089 ribosomal subunit interface protein (RefSeq) 0.19 Sama_1011 hypothetical protein (RefSeq) low > 62
Pseudomonas sp. S08-1 0.59 OH686_08550 Ribosome hibernation promoting factor Hpf 0.31 OH686_14765 ABC-type amino acid transport/signal transduction system, periplasmic component/domain low > 80
Shewanella loihica PV-4 0.59 Shew_3312 sigma 54 modulation protein/ribosomal protein S30EA (RefSeq) 0.20 Shew_3070 extracellular solute-binding protein (RefSeq) low > 60
Pseudomonas stutzeri RCH2 0.59 Psest_3314 ribosomal subunit interface protein 0.23 Psest_0342 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain low > 67
Pseudomonas sp. DMC3 0.58 GFF1827 Ribosome hibernation promoting factor 0.31 GFF145 hypothetical protein low > 89
Shewanella sp. ANA-3 0.58 Shewana3_0671 sigma 54 modulation protein / SSU ribosomal protein S30P (RefSeq) 0.17 Shewana3_1085 hypothetical protein (RefSeq) low > 73
Pseudomonas aeruginosa PA14 0.58 IKLFDK_01765 Sigma 54 modulation protein / S30EA ribosomal protein 0.29 IKLFDK_23165 amino acid ABC transporter substrate-binding protein low > 100
Pseudomonas segetis P6 0.57 MPMX49_03859 Ribosome hibernation promoting factor 0.17 MPMX49_01433 hypothetical protein low > 75
Pseudomonas sp. BP01 0.57 JOY50_RS11125 hpf ribosome hibernation-promoting factor, HPF/YfiA family 0.28 JOY50_RS09920 ABC transporter substrate-binding protein low > 84
Shewanella oneidensis MR-1 0.56 SO3962 yfiA-3 ribosomal subunit interface protein (NCBI ptt file) 0.19 SO0056 transporter, putative (NCBI ptt file) low > 76
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_07040 hypothetical protein 0.32 AO356_13745 amino acid ABC transporter substrate-binding protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_3268 Ribosome hibernation protein YhbH 0.32 Pf6N2E2_4670 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain low > 103
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_1081 Ribosome hibernation protein YhbH 0.32 Pf1N1B4_2409 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain low > 87
Pseudomonas putida KT2440 0.55 PP_0951 Ribosome hibernation promoting factor 0.29 PP_4955 conserved exported protein of unknown function low > 96
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_05185 hypothetical protein 0.31 AO353_07865 amino acid ABC transporter substrate-binding protein low > 101
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_5015 Ribosome hibernation protein YhbH 0.31 PfGW456L13_1075 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain low > 87
Pseudomonas simiae WCS417 0.54 PS417_04340 ribosome hibernation promoting factor HPF 0.32 PS417_26385 amino acid ABC transporter substrate-binding protein low > 88
Pseudomonas sp. RS175 0.54 PFR28_00172 Ribosome hibernation promoting factor 0.31 PFR28_04175 hypothetical protein low > 88
Pseudomonas lactucae CFBP13502 0.54 GEMAOFIL_01074 Ribosome hibernation promoting factor 0.30 GEMAOFIL_05403 hypothetical protein
Pseudomonas sp. SVBP6 0.54 COO64_RS04280 hpf ribosome hibernation-promoting factor, HPF/YfiA family 0.31 COO64_RS17605 ABC transporter substrate-binding protein low > 93
Pseudomonas fluorescens SBW25 0.54 PFLU_RS04395 ribosome-associated translation inhibitor RaiA 0.33 PFLU_RS28035 transporter substrate-binding domain-containing protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.54 PFLU_RS04395 ribosome-associated translation inhibitor RaiA 0.33 PFLU_RS28035 transporter substrate-binding domain-containing protein low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.53 Psyr_4148 sigma 54 modulation protein / SSU ribosomal protein S30P 0.29 Psyr_0513 amino acid ABC transporter substrate-binding protein, PAAT family low > 86
Pseudomonas syringae pv. syringae B728a 0.53 Psyr_4148 sigma 54 modulation protein / SSU ribosomal protein S30P 0.29 Psyr_0513 amino acid ABC transporter substrate-binding protein, PAAT family low > 86

Not shown: 64 genomes with orthologs for CSW01_12820 only; 2 genomes with orthologs for CSW01_19005 only