Conservation of cofitness between CSW01_03340 and CSW01_18155 in Vibrio cholerae E7946 ATCC 55056

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03340 ribosomal RNA large subunit methyltransferase E 1.0 CSW01_18155 HAD family hydrolase 0.45 12
Enterobacter sp. TBS_079 0.72 MPMX20_04083 Ribosomal RNA large subunit methyltransferase E 0.27 MPMX20_04644 6-phosphogluconate phosphatase — —
Escherichia coli ECOR38 0.72 HEPCGN_16930 rlmE 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.27 HEPCGN_13635 yieH 6-phosphogluconate phosphatase — —
Escherichia coli ECRC102 0.72 NIAGMN_15815 rlmE 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.27 NIAGMN_12685 yieH 6-phosphogluconate phosphatase — —
Escherichia coli ECRC62 0.72 BNILDI_01680 rlmE 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.27 BNILDI_04450 yieH 6-phosphogluconate phosphatase — —
Escherichia coli Nissle 1917 0.72 ECOLIN_RS18310 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.27 ECOLIN_RS21390 6-phosphogluconate phosphatase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.72 GFF2920 Cell division protein FtsJ / Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) ## LSU rRNA Um2552 0.26 GFF1739 Putative phosphatase YieH — —
Escherichia fergusonii Becca 0.72 EFB2_00644 Ribosomal RNA large subunit methyltransferase E 0.27 EFB2_04917 6-phosphogluconate phosphatase — —
Escherichia coli BW25113 0.72 b3179 rlmE 23S rRNA U2552 ribose 2'-O-methyltransferase, SAM-dependent (NCBI) 0.27 b3715 yieH predicted hydrolase (NCBI) — —
Escherichia coli ECRC101 0.72 MCAODC_08575 rlmE 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.27 MCAODC_05440 yieH 6-phosphogluconate phosphatase — —
Escherichia coli BL21 0.72 ECD_03044 23S rRNA U2552 2'-O-ribose methyltransferase, SAM-dependent 0.27 ECD_03599 phosphoenolpyruvate and 6-phosphogluconate phosphatase — —
Escherichia coli ECOR27 0.72 NOLOHH_09855 rlmE 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.27 NOLOHH_07080 yieH 6-phosphogluconate phosphatase — —
Escherichia coli ECRC99 0.72 KEDOAH_10095 rlmE 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.27 KEDOAH_13220 yieH 6-phosphogluconate phosphatase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_00521 Ribosomal RNA large subunit methyltransferase E 0.27 OHPLBJKB_04338 6-phosphogluconate phosphatase — —
Escherichia coli ECRC98 0.72 JDDGAC_21680 rlmE 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.27 JDDGAC_18550 yieH 6-phosphogluconate phosphatase — —
Escherichia coli ECRC100 0.72 OKFHMN_18055 rlmE 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.27 OKFHMN_14930 yieH 6-phosphogluconate phosphatase — —
Pantoea sp. MT58 0.72 IAI47_17070 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.28 IAI47_18805 6-phosphogluconate phosphatase — —
Dickeya dianthicola 67-19 0.72 HGI48_RS03195 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.30 HGI48_RS21600 6-phosphogluconate phosphatase — —
Enterobacter asburiae PDN3 0.72 EX28DRAFT_3230 cell division protein FtsJ 0.27 EX28DRAFT_3999 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED — —
Pantoea agglomerans CFBP13505 P0401 0.72 PagCFBP13505_RS09165 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.28 PagCFBP13505_RS19375 6-phosphogluconate phosphatase — —
Dickeya dianthicola ME23 0.71 DZA65_RS03190 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.30 DZA65_RS22585 6-phosphogluconate phosphatase — —
Dickeya dadantii 3937 0.71 DDA3937_RS03025 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.30 DDA3937_RS21430 6-phosphogluconate phosphatase — —
Klebsiella pneumoniae MKP103 0.71 KDGMDA_05965 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.26 KDGMDA_08735 6-phosphogluconate phosphatase — —
Klebsiella michiganensis M5al 0.71 BWI76_RS25145 23S rRNA (uridine(2552)-2'-O)-methyltransferase 0.27 BWI76_RS00115 6-phosphogluconate phosphatase — —
Serratia liquefaciens MT49 0.71 IAI46_01890 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.27 IAI46_25215 6-phosphogluconate phosphatase — —
Rahnella sp. WP5 0.71 EX31_RS08585 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.29 EX31_RS06035 6-phosphogluconate phosphatase — —
Pectobacterium carotovorum WPP14 0.71 HER17_RS18320 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.28 HER17_RS21735 6-phosphogluconate phosphatase — —
Pseudomonas fluorescens SBW25-INTG 0.58 PFLU_RS25860 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.24 PFLU_RS10295 HAD-IA family hydrolase — —
Pseudomonas fluorescens SBW25 0.58 PFLU_RS25860 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.24 PFLU_RS10295 HAD-IA family hydrolase — —
Pseudomonas sp. BP01 0.58 JOY50_RS26785 rlmE 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE 0.12 JOY50_RS21440 HAD family phosphatase — —
Variovorax sp. SCN45 0.45 GFF370 23S rRNA (uridine(2552)-2'-O)-methyltransferase (EC 2.1.1.166) 0.17 GFF2001 Putative phosphatase YieH low > 127
Paraburkholderia graminis OAS925 0.44 ABIE53_003000 23S rRNA (uridine2552-2'-O)-methyltransferase 0.17 ABIE53_006171 HAD superfamily hydrolase (TIGR01509 family) — —
Variovorax sp. OAS795 0.44 ABID97_RS17050 RlmE family RNA methyltransferase 0.16 ABID97_RS25155 HAD family phosphatase low > 91
Acidovorax sp. GW101-3H11 0.44 Ac3H11_441 Heat shock protein FtsJ/RrmJ @ Ribosomal RNA large subunit methyltransferase E (EC 2.1.1.-) 0.16 Ac3H11_3005 Putative phosphatase YieH low > 79
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS04800 RlmE family RNA methyltransferase 0.17 QEN71_RS37130 HAD family phosphatase — —
Paraburkholderia bryophila 376MFSha3.1 0.43 H281DRAFT_04407 23S rRNA Um-2552 2'-O-methyltransferase 0.15 H281DRAFT_02444 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED — —
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS14170 ribosomal RNA large subunit methyltransferase E 0.15 BPHYT_RS24950 HAD family hydrolase — —
Herbaspirillum seropedicae SmR1 0.38 HSERO_RS06940 23S rRNA methyltransferase 0.25 HSERO_RS00780 sugar transferase low > 78
Sinorhizobium meliloti 1021 0.37 SMc00811 cell division protein 0.22 SMc01502 hydrolase phosphatase — —
Rhizobium sp. OAE497 0.36 ABIE40_RS03440 RlmE family RNA methyltransferase 0.21 ABIE40_RS16990 HAD family hydrolase — —
Phaeobacter inhibens DSM 17395 0.33 PGA1_c16080 ribosomal RNA large subunit methyltransferase J 0.19 PGA1_c29250 putative haloacid dehalogenase-like hydrolase — —

Not shown: 64 genomes with orthologs for CSW01_03340 only; 1 genomes with orthologs for CSW01_18155 only