Conservation of cofitness between CSW01_03080 and CSW01_17270 in Vibrio cholerae E7946 ATCC 55056

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03080 YraN family protein 1.0 CSW01_17270 isoprenoid biosynthesis protein ElbB 0.45 7
Dickeya dianthicola 67-19 0.45 HGI48_RS01600 YraN family protein 0.58 HGI48_RS01575 isoprenoid biosynthesis glyoxalase ElbB low > 71
Dickeya dianthicola ME23 0.44 DZA65_RS01675 YraN family protein 0.58 DZA65_RS01650 isoprenoid biosynthesis glyoxalase ElbB low > 75
Dickeya dadantii 3937 0.44 DDA3937_RS01705 YraN family protein 0.60 DDA3937_RS01680 isoprenoid biosynthesis glyoxalase ElbB low > 74
Pectobacterium carotovorum WPP14 0.43 HER17_RS19870 YraN family protein 0.57 HER17_RS19895 isoprenoid biosynthesis glyoxalase ElbB low > 75
Klebsiella michiganensis M5al 0.41 BWI76_RS24920 YraN family protein 0.58 BWI76_RS25295 glutamine amidotransferase low > 92
Klebsiella pneumoniae MKP103 0.40 KDGMDA_05790 YraN family protein 0.58 KDGMDA_06110 isoprenoid biosynthesis glyoxalase ElbB — —
Serratia liquefaciens MT49 0.40 IAI46_22305 YraN family protein 0.56 IAI46_22330 isoprenoid biosynthesis glyoxalase ElbB low > 86
Escherichia coli ECOR38 0.39 HEPCGN_17100 yraN YraN family protein 0.57 HEPCGN_16780 elbB isoprenoid biosynthesis glyoxalase ElbB low > 88
Escherichia coli ECOR27 0.39 NOLOHH_10025 yraN YraN family protein 0.58 NOLOHH_09705 elbB isoprenoid biosynthesis glyoxalase ElbB low > 76
Escherichia coli ECRC62 0.39 BNILDI_01505 yraN YraN family protein 0.58 BNILDI_01830 elbB isoprenoid biosynthesis glyoxalase ElbB low > 75
Escherichia coli BW25113 0.38 b3148 yraN hypothetical protein (NCBI) 0.58 b3209 yhbL sigma cross-reacting protein 27A (SCRP-27A) (VIMSS) low > 76
Escherichia coli BL21 0.38 ECD_03015 UPF0102 family protein 0.58 ECD_03074 isoprenoid biosynthesis protein with amidotransferase-like domain low > 61
Escherichia coli Nissle 1917 0.38 ECOLIN_RS18095 YraN family protein 0.58 ECOLIN_RS18460 isoprenoid biosynthesis glyoxalase ElbB low > 55
Escherichia fergusonii Becca 0.38 EFB2_00675 hypothetical protein 0.58 EFB2_00614 Glyoxalase ElbB low > 86
Escherichia coli ECRC100 0.38 OKFHMN_18225 yraN YraN family protein 0.57 OKFHMN_17905 elbB isoprenoid biosynthesis glyoxalase ElbB low > 79
Escherichia coli ECRC102 0.38 NIAGMN_15985 yraN YraN family protein 0.57 NIAGMN_15665 elbB isoprenoid biosynthesis glyoxalase ElbB low > 80
Escherichia coli ECRC98 0.38 JDDGAC_21850 yraN YraN family protein 0.57 JDDGAC_21530 elbB isoprenoid biosynthesis glyoxalase ElbB low > 87
Escherichia coli ECRC101 0.38 MCAODC_08745 yraN YraN family protein 0.57 MCAODC_08425 elbB isoprenoid biosynthesis glyoxalase ElbB low > 88
Escherichia coli ECRC99 0.38 KEDOAH_09925 yraN YraN family protein 0.57 KEDOAH_10245 elbB isoprenoid biosynthesis glyoxalase ElbB — —
Enterobacter asburiae PDN3 0.38 EX28DRAFT_3197 TIGR00252 family protein 0.57 EX28DRAFT_3262 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis low > 76
Enterobacter sp. TBS_079 0.37 MPMX20_04052 hypothetical protein 0.56 MPMX20_04114 Glyoxalase ElbB low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.37 GFF1519 Predicted endonuclease distantly related to archaeal Holliday junction resolvase 0.57 GFF2953 Sigma cross-reacting protein 27A low > 78
Kangiella aquimarina DSM 16071 0.37 B158DRAFT_2107 TIGR00252 family protein 0.65 B158DRAFT_0508 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis low > 40
Shewanella loihica PV-4 0.37 Shew_0226 hypothetical protein (RefSeq) 0.61 Shew_3713 isoprenoid biosynthesis protein (RefSeq) low > 60
Pseudomonas fluorescens GW456-L13 0.36 PfGW456L13_1641 Predicted endonuclease distantly related to archaeal Holliday junction resolvase 0.65 PfGW456L13_870 Sigma cross-reacting protein 27A low > 87
Pseudomonas fluorescens FW300-N1B4 0.36 Pf1N1B4_955 Predicted endonuclease distantly related to archaeal Holliday junction resolvase 0.64 Pf1N1B4_2204 Sigma cross-reacting protein 27A — —
Alteromonas macleodii MIT1002 0.36 MIT1002_03115 hypothetical protein 0.59 MIT1002_00015 Sigma cross-reacting protein 27A low > 70
Pseudomonas sp. DMC3 0.35 GFF4430 hypothetical protein 0.59 GFF339 Glyoxalase ElbB low > 89
Pseudomonas sp. RS175 0.35 PFR28_03599 hypothetical protein 0.63 PFR28_04349 Glyoxalase ElbB low > 88
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_17100 hypothetical protein 0.63 AO356_12875 isoprenoid biosynthesis protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_5344 Predicted endonuclease distantly related to archaeal Holliday junction resolvase 0.62 Pf6N2E2_4449 Sigma cross-reacting protein 27A low > 103
Pseudomonas stutzeri RCH2 0.33 Psest_3272 TIGR00252 family protein 0.58 Psest_3734 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis low > 67
Pseudomonas fluorescens SBW25 0.33 PFLU_RS04645 YraN family protein 0.62 PFLU_RS29115 isoprenoid biosynthesis glyoxalase ElbB low > 109
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS04645 YraN family protein 0.62 PFLU_RS29115 isoprenoid biosynthesis glyoxalase ElbB low > 109
Pseudomonas simiae WCS417 0.33 PS417_04580 hypothetical protein 0.62 PS417_27455 isoprenoid biosynthesis protein low > 88
Shewanella oneidensis MR-1 0.32 SO0299 conserved hypothetical protein TIGR00252 (NCBI ptt file) 0.60 SO4670 elbB enhancing lycopene biosynthesis protein (NCBI ptt file) low > 76
Pseudomonas sp. BP01 0.32 JOY50_RS15175 YraN family protein 0.64 JOY50_RS22560 elbB isoprenoid biosynthesis glyoxalase ElbB low > 84
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_4114 Protein of unknown function UPF0102 0.60 Psyr_0290 ThiJ/PfpI low > 86
Pseudomonas putida KT2440 0.32 PP_1324 putative endonuclease distantly related to archaeal Holliday junction resolvase 0.63 PP_5220 putative hydrolase low > 96
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_4114 Protein of unknown function UPF0102 0.60 Psyr_0290 ThiJ/PfpI low > 86
Shewanella sp. ANA-3 0.32 Shewana3_3881 hypothetical protein (RefSeq) 0.61 Shewana3_4108 isoprenoid biosynthesis protein with amidotransferase-like domain (RefSeq) 0.70 35
Pseudomonas sp. SVBP6 0.31 COO64_RS11835 YraN family protein 0.60 COO64_RS01100 elbB isoprenoid biosynthesis glyoxalase ElbB low > 93
Pseudomonas segetis P6 0.30 MPMX49_03821 hypothetical protein 0.59 MPMX49_04507 Glyoxalase ElbB low > 75
Shewanella amazonensis SB2B 0.30 Sama_3355 hypothetical protein (RefSeq) 0.59 Sama_0094 isoprenoid biosynthesis protein with amidotransferase-like domain (RefSeq) low > 62
Pseudomonas lactucae CFBP13502 0.25 GEMAOFIL_01119 hypothetical protein 0.62 GEMAOFIL_05626 Glyoxalase ElbB low > 93

Not shown: 33 genomes with orthologs for CSW01_03080 only; 8 genomes with orthologs for CSW01_17270 only