Conservation of cofitness between CSW01_08810 and CSW01_17220 in Vibrio cholerae E7946 ATCC 55056

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08810 efflux RND transporter periplasmic adaptor subunit 1.0 CSW01_17220 phosphonate utilization transcriptional regulator PhnR 0.60 3
Pseudomonas sp. S08-1 0.19 OH686_06745 Multidrug efflux system, membrane fusion component 0.44 OH686_19750 Transcriptional regulator, GntR family low > 80
Pseudomonas sp. RS175 0.18 PFR28_00378 Multidrug resistance protein MdtA 0.46 PFR28_03159 Putative transcriptional regulator of 2-aminoethylphosphonate degradation operons low > 88
Pseudomonas fluorescens FW300-N2C3 0.18 AO356_06135 RND transporter 0.47 AO356_19385 MFS transporter low > 104
Pseudomonas simiae WCS417 0.18 PS417_06110 RND transporter 0.44 PS417_09365 MFS transporter low > 88
Pseudomonas fluorescens FW300-N2E2 0.18 Pf6N2E2_3092 RND efflux membrane fusion protein 0.47 Pf6N2E2_5791 2-aminoethylphosphonate uptake and metabolism regulator low > 103
Alteromonas macleodii MIT1002 0.18 MIT1002_01360 Toluene efflux pump periplasmic linker protein TtgG precursor 0.12 MIT1002_03830 HTH-type transcriptional repressor YvoA low > 70
Pseudomonas fluorescens FW300-N1B4 0.18 Pf1N1B4_3062 RND efflux membrane fusion protein 0.47 Pf1N1B4_3749 2-aminoethylphosphonate uptake and metabolism regulator low > 87
Xanthobacter sp. DMC5 0.18 GFF4152 Multidrug resistance protein MdtE 0.15 GFF4075 HTH-type transcriptional repressor NagR — —
Pseudomonas fluorescens GW456-L13 0.18 PfGW456L13_4731 RND efflux membrane fusion protein 0.46 PfGW456L13_4198 2-aminoethylphosphonate uptake and metabolism regulator low > 87
Pseudomonas fluorescens SBW25 0.18 PFLU_RS06180 efflux RND transporter periplasmic adaptor subunit 0.45 PFLU_RS10020 UTRA domain-containing protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.18 PFLU_RS06180 efflux RND transporter periplasmic adaptor subunit 0.45 PFLU_RS10020 UTRA domain-containing protein low > 109
Pseudomonas sp. SVBP6 0.17 COO64_RS19545 efflux RND transporter periplasmic adaptor subunit 0.46 COO64_RS06940 phnR phosphonate utilization transcriptional regulator PhnR low > 93
Pseudomonas fluorescens FW300-N2E3 0.17 AO353_16360 RND transporter 0.47 AO353_02400 MFS transporter low > 101
Pseudomonas lactucae CFBP13502 0.17 GEMAOFIL_01392 Multidrug resistance protein MdtA 0.44 GEMAOFIL_02105 Putative transcriptional regulator of 2-aminoethylphosphonate degradation operons low > 96
Pseudomonas orientalis W4I3 0.17 QF045_RS08960 efflux RND transporter periplasmic adaptor subunit 0.44 QF045_RS12005 UTRA domain-containing protein low > 93
Pseudomonas sp. DMC3 0.17 GFF2033 Multidrug resistance protein MdtA 0.47 GFF2592 Putative transcriptional regulator of 2-aminoethylphosphonate degradation operons low > 89
Pseudomonas aeruginosa PUPa3 0.17 DQ20_RS42535 mexJ;inference=COORDINATES multidrug efflux RND transporter periplasmic adaptor subunit MexJ 0.44 DQ20_RS40365 UTRA domain-containing protein low > 101
Pseudomonas aeruginosa MRSN321 0.17 DY961_RS14590 mexJ;inference=COORDINATES multidrug efflux RND transporter periplasmic adaptor subunit MexJ 0.44 DY961_RS00670 UTRA domain-containing protein low > 100
Pseudomonas segetis P6 0.17 MPMX49_01633 Multidrug resistance protein MdtA 0.46 MPMX49_01786 Putative transcriptional regulator of 2-aminoethylphosphonate degradation operons low > 75
Pseudomonas sp. BP01 0.17 JOY50_RS26095 efflux RND transporter periplasmic adaptor subunit 0.45 JOY50_RS27920 UTRA domain-containing protein low > 84
Pseudomonas aeruginosa PA14 0.16 IKLFDK_18775 multidrug efflux RND transporter periplasmic adaptor subunit MexJ 0.44 IKLFDK_16615 MFS transporter low > 98
Rhodopseudomonas palustris CGA009 0.16 TX73_010140 efflux RND transporter periplasmic adaptor subunit 0.15 TX73_003600 phosphonate metabolism transcriptional regulator PhnF low > 86
Pseudomonas putida KT2440 0.16 PP_1516 RND membrane fusion protein 0.45 PP_1727 Transcriptional regulator, GntR family low > 96
Paraburkholderia sabiae LMG 24235 0.16 QEN71_RS07195 efflux RND transporter periplasmic adaptor subunit 0.17 QEN71_RS14195 phosphonate metabolism transcriptional regulator PhnF low > 153
Acinetobacter baumannii LAC-4 0.16 RR41_RS00165 efflux RND transporter periplasmic adaptor subunit 0.33 RR41_RS10960 UTRA domain-containing protein low > 55
Paraburkholderia bryophila 376MFSha3.1 0.15 H281DRAFT_05198 RND family efflux transporter, MFP subunit 0.19 H281DRAFT_00558 transcriptional regulator, GntR family low > 103
Azospirillum sp. SherDot2 0.15 MPMX19_05261 Multidrug resistance protein MdtE 0.17 MPMX19_03609 HTH-type transcriptional repressor NagR low > 112
Phaeobacter inhibens DSM 17395 0.15 PGA1_c24620 putative secretion protein 0.14 PGA1_c04230 putative phosphonates metabolism transcriptional regulator phnF low > 62
Burkholderia phytofirmans PsJN 0.15 BPHYT_RS11370 RND transporter MFP subunit 0.15 BPHYT_RS29455 GntR family transcriptional regulator — —
Serratia liquefaciens MT49 0.15 IAI46_13380 efflux RND transporter periplasmic adaptor subunit 0.42 IAI46_10825 phosphonate utilization transcriptional regulator PhnR low > 87
Xanthomonas campestris pv. campestris strain 8004 0.14 Xcc-8004.2439.1 Probable Co/Zn/Cd efflux system membrane fusion protein 0.36 Xcc-8004.4418.1 Transcriptional regulator, GntR family low > 74
Dickeya dianthicola ME23 0.13 DZA65_RS08245 efflux RND transporter periplasmic adaptor subunit 0.37 DZA65_RS18590 UTRA domain-containing protein low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.13 GFF4247 RND efflux system, membrane fusion protein CmeA 0.43 GFF4332 2-aminoethylphosphonate uptake and metabolism regulator low > 78
Pantoea sp. MT58 0.12 IAI47_21720 efflux RND transporter periplasmic adaptor subunit 0.43 IAI47_17920 UTRA domain-containing protein low > 76
Caulobacter crescentus NA1000 0.10 CCNA_00851 periplasmic multidrug efflux lipoprotein precursor 0.17 CCNA_00454 GntR-family transcriptional regulator low > 66
Caulobacter crescentus NA1000 Δfur 0.10 CCNA_00851 periplasmic multidrug efflux lipoprotein precursor 0.17 CCNA_00454 GntR-family transcriptional regulator low > 67

Not shown: 18 genomes with orthologs for CSW01_08810 only; 39 genomes with orthologs for CSW01_17220 only