Conservation of cofitness between CSW01_08635 and CSW01_14565 in Vibrio cholerae E7946 ATCC 55056

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08635 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 1.0 CSW01_14565 type VI secretion system baseplate subunit TssF 0.44 11
Escherichia coli Nissle 1917 0.50 ECOLIN_RS04875 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.23 ECOLIN_RS15765 type VI secretion system baseplate subunit TssF — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_02746 tRNA 5-carboxymethoxyuridine methyltransferase 0.42 OHPLBJKB_03430 hypothetical protein low > 74
Klebsiella pneumoniae MKP103 0.50 KDGMDA_18030 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.24 KDGMDA_24740 type VI secretion system baseplate subunit TssF low > 95
Escherichia coli ECRC98 0.50 JDDGAC_09030 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.42 JDDGAC_13470 tssF Type VI secretion system protein TssF low > 87
Escherichia coli ECRC100 0.50 OKFHMN_05420 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.41 OKFHMN_09870 tssF Type VI secretion system protein TssF low > 79
Escherichia coli ECRC102 0.50 NIAGMN_03140 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.42 NIAGMN_07720 tssF Type VI secretion system protein TssF low > 80
Escherichia coli ECRC101 0.50 MCAODC_24810 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.42 MCAODC_00390 tssF Type VI secretion system protein TssF low > 87
Escherichia coli ECRC99 0.50 KEDOAH_22315 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.42 KEDOAH_18280 tssF Type VI secretion system protein TssF — —
Escherichia coli ECOR27 0.50 NOLOHH_21980 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.42 NOLOHH_02230 tssF Type VI secretion system protein TssF low > 76
Dickeya dadantii 3937 0.50 DDA3937_RS09875 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.53 DDA3937_RS07030 type VI secretion system baseplate subunit TssF low > 74
Dickeya dianthicola 67-19 0.49 HGI48_RS09885 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.53 HGI48_RS07960 type VI secretion system baseplate subunit TssF low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.49 GFF3678 S-adenosylmethionine-dependent methyltransferase Functionally Coupled to the MukBEF Chromosome Partitioning Mechanism 0.18 GFF4050 Protein ImpG/VasA low > 78
Dickeya dianthicola ME23 0.49 DZA65_RS10220 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.53 DZA65_RS08555 type VI secretion system baseplate subunit TssF low > 75
Rahnella sp. WP5 0.49 EX31_RS18180 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.23 EX31_RS01975 type VI secretion system baseplate subunit TssF low > 89
Pectobacterium carotovorum WPP14 0.49 HER17_RS12065 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.52 HER17_RS04855 type VI secretion system baseplate subunit TssF low > 75
Pantoea sp. MT58 0.48 IAI47_12800 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.22 IAI47_17375 type VI secretion system baseplate subunit TssF low > 76
Serratia liquefaciens MT49 0.48 IAI46_08715 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.16 IAI46_05550 type VI secretion system baseplate subunit TssF low > 87
Erwinia tracheiphila HP pepo 2.2 0.47 IJEDHG_20365 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.18 IJEDHG_04995 tssF type VI secretion system baseplate subunit TssF low > 61
Erwinia tracheiphila SCR3 0.47 LU632_RS09865 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.46 LU632_RS17675 tssF type VI secretion system baseplate subunit TssF low > 73
Enterobacter sp. TBS_079 0.47 MPMX20_01579 tRNA 5-carboxymethoxyuridine methyltransferase 0.23 MPMX20_01644 hypothetical protein low > 85
Enterobacter asburiae PDN3 0.46 EX28DRAFT_2015 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 0.22 EX28DRAFT_0259 type VI secretion protein, VC_A0110 family low > 76
Pantoea agglomerans CFBP13505 P0401 0.45 PagCFBP13505_RS04530 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.19 PagCFBP13505_RS19815 type VI secretion system baseplate subunit TssF low > 74
Erwinia amylovora T8 0.43 OLJFJH_16080 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.22 OLJFJH_03085 type VI secretion system baseplate subunit TssF low > 58
Pseudomonas sp. S08-1 0.29 OH686_07475 tRNA uridine 5-oxyacetic acid(34) methyltransferase 0.36 OH686_12825 T6SS component TssF (ImpG/VasA) low > 80
Pseudomonas aeruginosa MRSN321 0.29 DY961_RS09715 methyltransferase domain-containing protein 0.36 DY961_RS19965 tssF;go_function=molecular_function|0003674||IEA;go_process=protein type VI secretion system baseplate subunit TssF low > 100
Pseudomonas aeruginosa PA14 0.29 IKLFDK_29635 SAM-dependent methyltransferase 0.36 IKLFDK_07995 Protein ImpG/VasA low > 98
Pseudomonas simiae WCS417 0.29 PS417_03035 SAM-dependent methyltransferase 0.36 PS417_15310 type VI secretion protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_08125 SAM-dependent methyltransferase 0.36 AO356_12145 type VI secretion protein low > 104
Pseudomonas aeruginosa PUPa3 0.28 DQ20_RS52330 methyltransferase domain-containing protein 0.36 DQ20_RS54060 tssF;go_function=molecular_function|0003674||IEA;go_process=protein type VI secretion system baseplate subunit TssF low > 101
Pseudomonas lactucae CFBP13502 0.28 GEMAOFIL_00839 tRNA 5-carboxymethoxyuridine methyltransferase 0.19 GEMAOFIL_00062 hypothetical protein low > 96
Pseudomonas orientalis W4I3 0.28 QF045_RS06070 methyltransferase domain-containing protein 0.36 QF045_RS14215 type VI secretion system baseplate subunit TssF low > 93
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_3497 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) 0.35 Pf6N2E2_4301 Protein ImpG/VasA low > 103
Pseudomonas fluorescens SBW25 0.28 PFLU_RS03115 methyltransferase domain-containing protein 0.19 PFLU_RS29650 type VI secretion system baseplate subunit TssF low > 109
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS03115 methyltransferase domain-containing protein 0.19 PFLU_RS29650 type VI secretion system baseplate subunit TssF low > 109
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_1289 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) 0.37 Pf1N1B4_2086 Protein ImpG/VasA low > 87
Pseudomonas sp. DMC3 0.27 GFF3328 tRNA 5-carboxymethoxyuridine methyltransferase 0.37 GFF454 hypothetical protein low > 89
Pseudomonas sp. RS175 0.27 PFR28_05234 tRNA 5-carboxymethoxyuridine methyltransferase 0.19 PFR28_02388 hypothetical protein low > 88
Pseudomonas stutzeri RCH2 0.27 Psest_3358 Methyltransferase domain. 0.36 Psest_0127 type VI secretion protein, VC_A0110 family low > 67
Pseudomonas sp. SVBP6 0.26 COO64_RS26300 methyltransferase domain-containing protein 0.19 COO64_RS00470 tssF type VI secretion system baseplate subunit TssF low > 93
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_0641 smtA protein 0.27 Psyr_4956 protein of unknown function DUF879 low > 86
Pseudomonas segetis P6 0.26 MPMX49_04011 tRNA 5-carboxymethoxyuridine methyltransferase 0.39 MPMX49_00135 hypothetical protein low > 75
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_0641 smtA protein 0.27 Psyr_4956 protein of unknown function DUF879 low > 86
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_13750 SAM-dependent methyltransferase 0.36 AO353_09425 type VI secretion protein low > 101
Pseudomonas sp. BP01 0.26 JOY50_RS23225 methyltransferase domain-containing protein 0.25 JOY50_RS19900 tssF type VI secretion system baseplate subunit TssF low > 84
Pseudomonas putida KT2440 0.25 PP_0578 putative Methyltransferase 0.48 PP_2621 conserved protein of unknown function low > 96

Not shown: 12 genomes with orthologs for CSW01_08635 only; 20 genomes with orthologs for CSW01_14565 only