| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_18635 | | phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) | 1.0 | CSW01_13810 | | phosphoenolpyruvate carboxykinase (ATP) | 0.89 | 7 |
| Echinicola vietnamensis KMM 6221, DSM 17526 | 0.65 | Echvi_4222 | | 6-phosphogluconate dehydrogenase, decarboxylating | 0.42 | Echvi_2957 | | phosphoenolpyruvate carboxykinase (ATP) | — | — |
| Parabacteroides merdae CL09T00C40 | 0.58 | HMPREF1078_RS08640 | | decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase | 0.72 | HMPREF1078_RS07235 | | phosphoenolpyruvate carboxykinase (ATP) | — | — |
| Bacteroides stercoris CC31F | 0.54 | HMPREF1181_RS12525 | | decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase | 0.72 | HMPREF1181_RS01170 | | phosphoenolpyruvate carboxykinase (ATP) | — | — |
| Dickeya dianthicola ME23 | 0.53 | DZA65_RS07180 | | NADP-dependent phosphogluconate dehydrogenase | 0.81 | DZA65_RS20830 | | phosphoenolpyruvate carboxykinase (ATP) | low | > 75 |
| Pectobacterium carotovorum WPP14 | 0.52 | HER17_RS14505 | | NADP-dependent phosphogluconate dehydrogenase | 0.80 | HER17_RS01710 | | phosphoenolpyruvate carboxykinase (ATP) | low | > 75 |
| Escherichia coli ECRC62 | 0.52 | BNILDI_14695 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.81 | BNILDI_02685 | pckA | phosphoenolpyruvate carboxykinase (ATP) | low | > 75 |
| Escherichia coli BW25113 | 0.52 | b2029 | gnd | 6-phosphogluconate dehydrogenase (NCBI) | 0.81 | b3403 | pck | phosphoenolpyruvate carboxykinase (NCBI) | low | > 76 |
| Escherichia coli ECRC102 | 0.52 | NIAGMN_22415 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.81 | NIAGMN_14815 | pckA | phosphoenolpyruvate carboxykinase (ATP) | — | — |
| Escherichia coli ECRC98 | 0.52 | JDDGAC_28580 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.81 | JDDGAC_20675 | pckA | phosphoenolpyruvate carboxykinase (ATP) | low | > 86 |
| Escherichia coli ECRC100 | 0.52 | OKFHMN_24470 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.81 | OKFHMN_17045 | pckA | phosphoenolpyruvate carboxykinase (ATP) | low | > 80 |
| Escherichia coli ECRC101 | 0.52 | MCAODC_20470 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.81 | MCAODC_07575 | pckA | phosphoenolpyruvate carboxykinase (ATP) | low | > 87 |
| Escherichia coli ECRC99 | 0.52 | KEDOAH_03680 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.81 | KEDOAH_11095 | pckA | phosphoenolpyruvate carboxykinase (ATP) | — | — |
| Escherichia coli Nissle 1917 | 0.52 | ECOLIN_RS11990 | | NADP-dependent phosphogluconate dehydrogenase | 0.81 | ECOLIN_RS19435 | | phosphoenolpyruvate carboxykinase (ATP) | low | > 55 |
| Dickeya dadantii 3937 | 0.52 | DDA3937_RS06805 | | NADP-dependent phosphogluconate dehydrogenase | 0.81 | DDA3937_RS19610 | | phosphoenolpyruvate carboxykinase (ATP) | low | > 74 |
| Escherichia coli ECOR27 | 0.52 | NOLOHH_15785 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.81 | NOLOHH_08835 | pckA | phosphoenolpyruvate carboxykinase (ATP) | low | > 75 |
| Serratia liquefaciens MT49 | 0.52 | IAI46_08160 | | NADP-dependent phosphogluconate dehydrogenase | 0.81 | IAI46_23770 | | phosphoenolpyruvate carboxykinase (ATP) | — | — |
| Escherichia coli BL21 | 0.52 | ECD_01931 | | 6-phosphogluconate dehydrogenase, decarboxylating | 0.81 | ECD_03255 | | phosphoenolpyruvate carboxykinase [ATP] | low | > 61 |
| Escherichia fergusonii Becca | 0.52 | EFB2_01826 | | 6-phosphogluconate dehydrogenase, decarboxylating | 0.81 | EFB2_00425 | | Phosphoenolpyruvate carboxykinase (ATP) | low | > 86 |
| Rahnella sp. WP5 | 0.52 | EX31_RS11475 | | NADP-dependent phosphogluconate dehydrogenase | 0.79 | EX31_RS04780 | | phosphoenolpyruvate carboxykinase (ATP) | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.52 | OHPLBJKB_01659 | | 6-phosphogluconate dehydrogenase, decarboxylating | 0.81 | OHPLBJKB_00300 | | Phosphoenolpyruvate carboxykinase (ATP) | low | > 73 |
| Escherichia coli ECOR38 | 0.52 | HEPCGN_03175 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.81 | HEPCGN_15865 | pckA | phosphoenolpyruvate carboxykinase (ATP) | low | > 87 |
| Bacteroides ovatus ATCC 8483 | 0.52 | BACOVA_00509 | | phosphogluconate dehydrogenase (decarboxylating) | 0.72 | BACOVA_02011 | | phosphoenolpyruvate carboxykinase (ATP) | — | — |
| Klebsiella michiganensis M5al | 0.52 | BWI76_RS19025 | | phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) | 0.79 | BWI76_RS26155 | | phosphoenolpyruvate carboxykinase (ATP) | low | > 92 |
| Dickeya dianthicola 67-19 | 0.52 | HGI48_RS06840 | | NADP-dependent phosphogluconate dehydrogenase | 0.81 | HGI48_RS19740 | | phosphoenolpyruvate carboxykinase (ATP) | low | > 71 |
| Enterobacter sp. TBS_079 | 0.51 | MPMX20_03014 | | 6-phosphogluconate dehydrogenase, decarboxylating | 0.79 | MPMX20_04290 | | Phosphoenolpyruvate carboxykinase (ATP) | low | > 85 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.51 | GFF3903 | | 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) | 0.81 | GFF615 | | Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) | low | > 78 |
| Enterobacter asburiae PDN3 | 0.51 | EX28DRAFT_0529 | | 6-phosphogluconate dehydrogenase (decarboxylating) | 0.79 | EX28DRAFT_4140 | | phosphoenolpyruvate carboxykinase (ATP) | low | > 76 |
| Bacteroides thetaiotaomicron VPI-5482 | 0.51 | BT1222 | | 6-phosphogluconate dehydrogenase,decarboxylating (NCBI ptt file) | 0.73 | BT2790 | | phosphoenolpyruvate carboxykinase [ATP] (NCBI ptt file) | — | — |
| Phocaeicola dorei CL03T12C01 | 0.51 | ABI39_RS14350 | | decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase | 0.72 | ABI39_RS06685 | | phosphoenolpyruvate carboxykinase (ATP) | — | — |
| Erwinia amylovora T8 | 0.51 | OLJFJH_12140 | | NADP-dependent phosphogluconate dehydrogenase | 0.78 | OLJFJH_04150 | | phosphoenolpyruvate carboxykinase (ATP) | — | — |
| Phocaeicola vulgatus CL09T03C04 | 0.50 | HMPREF1058_RS18025 | | decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase | 0.72 | HMPREF1058_RS10065 | | phosphoenolpyruvate carboxykinase (ATP) | — | — |
| Pantoea sp. MT58 | 0.50 | IAI47_07035 | | NADP-dependent phosphogluconate dehydrogenase | 0.77 | IAI47_01830 | | phosphoenolpyruvate carboxykinase (ATP) | — | — |
| Erwinia tracheiphila SCR3 | 0.50 | LU632_RS08890 | gndA | NADP-dependent phosphogluconate dehydrogenase | 0.78 | LU632_RS22930 | pckA | phosphoenolpyruvate carboxykinase (ATP) | low | > 74 |
| Rhizobium sp. OAE497 | 0.43 | ABIE40_RS11035 | | NADP-dependent phosphogluconate dehydrogenase | 0.40 | ABIE40_RS19415 | | phosphoenolpyruvate carboxykinase | low | > 107 |
| Shewanella amazonensis SB2B | 0.43 | Sama_1365 | | 6-phosphogluconate dehydrogenase (RefSeq) | 0.38 | Sama_0165 | | Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (from data) | low | > 62 |
| Cellulophaga baltica 18 | 0.42 | M666_RS18130 | | NADP-dependent phosphogluconate dehydrogenase | 0.43 | M666_RS03005 | | phosphoenolpyruvate carboxykinase (ATP) | — | — |
| Alteromonas macleodii MIT1002 | 0.42 | MIT1002_02397 | | 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating | 0.36 | MIT1002_03972 | | Phosphoenolpyruvate carboxykinase [ATP] | low | > 70 |
| Pedobacter sp. GW460-11-11-14-LB5 | 0.42 | CA265_RS09805 | | phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) | 0.41 | CA265_RS23490 | | phosphoenolpyruvate carboxykinase (ATP) | low | > 88 |
| Agrobacterium fabrum C58 | 0.42 | Atu1526 | | 6-phosphogluconate dehydrogenase, decarboxylating | 0.42 | Atu0035 | | phosphoenolpyruvate carboxykinase | low | > 89 |
| Shewanella loihica PV-4 | 0.42 | Shew_2561 | | 6-phosphogluconate dehydrogenase (RefSeq) | 0.37 | Shew_3623 | | phosphoenolpyruvate carboxykinase (RefSeq) | low | > 60 |
| Shewanella sp. ANA-3 | 0.42 | Shewana3_1677 | | 6-phosphogluconate dehydrogenase (RefSeq) | 0.36 | Shewana3_0147 | | phosphoenolpyruvate carboxykinase (RefSeq) | low | > 73 |
| Sinorhizobium meliloti 1021 | 0.41 | SMc04262 | | 6-phosphogluconate dehydrogenase | 0.41 | SMc02562 | | phosphoenolpyruvate carboxykinase | low | > 103 |
| Shewanella oneidensis MR-1 | 0.40 | SO1902 | gnd | 6-phosphogluconate dehydrogenase, decarboxylating (NCBI ptt file) | 0.36 | SO0162 | pckA | phosphoenolpyruvate carboxykinase (ATP) (NCBI ptt file) | 0.30 | 43 |
Not shown: 14 genomes with orthologs for CSW01_18635 only; 27 genomes with orthologs for CSW01_13810 only