Conservation of cofitness between CSW01_07625 and CSW01_13810 in Vibrio cholerae E7946 ATCC 55056

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07625 sulfurtransferase FdhD 1.0 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) 0.78 11
Shewanella sp. ANA-3 0.64 Shewana3_3910 formate dehydrogenase accessory protein FdhD, putative (RefSeq) 0.36 Shewana3_0147 phosphoenolpyruvate carboxykinase (RefSeq) low > 73
Shewanella loihica PV-4 0.62 Shew_0053 formate dehydrogenase, subunit FdhD (RefSeq) 0.37 Shew_3623 phosphoenolpyruvate carboxykinase (RefSeq) low > 60
Shewanella amazonensis SB2B 0.61 Sama_3619 formate dehydrogenase accessory protein FdhD, putative (RefSeq) 0.38 Sama_0165 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) (from data) low > 62
Shewanella oneidensis MR-1 0.61 SO4503 formate dehydrogenase accessory protein FdhD, putative (NCBI ptt file) 0.36 SO0162 pckA phosphoenolpyruvate carboxykinase (ATP) (NCBI ptt file) low > 76
Bosea sp. OAE506 0.40 ABIE41_RS23440 formate dehydrogenase accessory sulfurtransferase FdhD 0.40 ABIE41_RS02665 phosphoenolpyruvate carboxykinase low > 77
Marinobacter adhaerens HP15 0.40 HP15_4131 formate dehydrogenase family accessory protein FdhD 0.36 HP15_3498 phosphoenolpyruvate carboxykinase (ATP) — —
Dinoroseobacter shibae DFL-12 0.38 Dshi_3282 formate dehydrogenase subunit FdhD (RefSeq) 0.39 Dshi_0213 Phosphoenolpyruvate carboxykinase (ATP) (RefSeq) low > 64
Xanthobacter sp. DMC5 0.12 GFF208 Sulfur carrier protein FdhD 0.40 GFF4136 Phosphoenolpyruvate carboxykinase (ATP) — —
Rhizobium sp. OAE497 0.12 ABIE40_RS17840 formate dehydrogenase accessory sulfurtransferase FdhD 0.40 ABIE40_RS19415 phosphoenolpyruvate carboxykinase low > 107
Pantoea sp. MT58 0.12 IAI47_18740 formate dehydrogenase accessory sulfurtransferase FdhD 0.77 IAI47_01830 phosphoenolpyruvate carboxykinase (ATP) low > 76
Pantoea agglomerans CFBP13505 P0401 0.12 PagCFBP13505_RS15775 formate dehydrogenase accessory sulfurtransferase FdhD 0.77 PagCFBP13505_RS18350 phosphoenolpyruvate carboxykinase (ATP) low > 74
Serratia liquefaciens MT49 0.12 IAI46_00205 formate dehydrogenase accessory sulfurtransferase FdhD 0.81 IAI46_23770 phosphoenolpyruvate carboxykinase (ATP) low > 86
Escherichia coli Nissle 1917 0.11 ECOLIN_RS22460 formate dehydrogenase accessory sulfurtransferase FdhD 0.81 ECOLIN_RS19435 phosphoenolpyruvate carboxykinase (ATP) low > 55
Escherichia fergusonii Becca 0.11 EFB2_04720 Sulfur carrier protein FdhD 0.81 EFB2_00425 Phosphoenolpyruvate carboxykinase (ATP) low > 86
Sinorhizobium meliloti 1021 0.11 SMc03085 formate dehydrogenase accessory protein 0.41 SMc02562 phosphoenolpyruvate carboxykinase low > 103
Alteromonas macleodii MIT1002 0.11 MIT1002_01712 formate dehydrogenase accessory protein 0.36 MIT1002_03972 Phosphoenolpyruvate carboxykinase [ATP] low > 70
Escherichia coli HS(pFamp)R (ATCC 700891) 0.11 OHPLBJKB_04155 Sulfur carrier protein FdhD 0.81 OHPLBJKB_00300 Phosphoenolpyruvate carboxykinase (ATP) low > 74
Escherichia coli ECRC100 0.11 OKFHMN_13950 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 0.81 OKFHMN_17045 pckA phosphoenolpyruvate carboxykinase (ATP) low > 79
Escherichia coli ECRC102 0.11 NIAGMN_11705 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 0.81 NIAGMN_14815 pckA phosphoenolpyruvate carboxykinase (ATP) low > 80
Escherichia coli ECOR38 0.11 HEPCGN_12585 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 0.81 HEPCGN_15865 pckA phosphoenolpyruvate carboxykinase (ATP) low > 88
Escherichia coli ECOR27 0.11 NOLOHH_06070 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 0.81 NOLOHH_08835 pckA phosphoenolpyruvate carboxykinase (ATP) low > 76
Escherichia coli ECRC101 0.11 MCAODC_04450 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 0.81 MCAODC_07575 pckA phosphoenolpyruvate carboxykinase (ATP) low > 88
Escherichia coli BW25113 0.11 b3895 fdhD formate dehydrogenase accessory protein (NCBI) 0.81 b3403 pck phosphoenolpyruvate carboxykinase (NCBI) low > 76
Escherichia coli ECRC99 0.11 KEDOAH_14205 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 0.81 KEDOAH_11095 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Escherichia coli ECRC62 0.11 BNILDI_05455 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 0.81 BNILDI_02685 pckA phosphoenolpyruvate carboxykinase (ATP) low > 75
Escherichia coli BL21 0.11 ECD_03780 formate dehydrogenase formation protein 0.81 ECD_03255 phosphoenolpyruvate carboxykinase [ATP] low > 61
Escherichia coli ECRC98 0.11 JDDGAC_17575 fdhD formate dehydrogenase accessory sulfurtransferase FdhD 0.81 JDDGAC_20675 pckA phosphoenolpyruvate carboxykinase (ATP) low > 87
Dickeya dianthicola ME23 0.10 DZA65_RS00290 formate dehydrogenase accessory sulfurtransferase FdhD 0.81 DZA65_RS20830 phosphoenolpyruvate carboxykinase (ATP) low > 75
Dickeya dadantii 3937 0.10 DDA3937_RS20955 formate dehydrogenase accessory sulfurtransferase FdhD 0.81 DDA3937_RS19610 phosphoenolpyruvate carboxykinase (ATP) low > 74
Erwinia amylovora T8 0.10 OLJFJH_05050 formate dehydrogenase accessory sulfurtransferase FdhD 0.78 OLJFJH_04150 phosphoenolpyruvate carboxykinase (ATP) low > 58
Dickeya dianthicola 67-19 0.10 HGI48_RS00290 formate dehydrogenase accessory sulfurtransferase FdhD 0.81 HGI48_RS19740 phosphoenolpyruvate carboxykinase (ATP) low > 71
Rahnella sp. WP5 0.10 EX31_RS05780 formate dehydrogenase accessory sulfurtransferase FdhD 0.79 EX31_RS04780 phosphoenolpyruvate carboxykinase (ATP) low > 89
Pseudomonas fluorescens FW300-N2E3 0.10 AO353_11830 formate dehydrogenase family accessory protein FdhD 0.33 AO353_11775 phosphoenolpyruvate carboxykinase [ATP] 0.20 101
Enterobacter sp. TBS_079 0.10 MPMX20_04574 Sulfur carrier protein FdhD 0.79 MPMX20_04290 Phosphoenolpyruvate carboxykinase (ATP) low > 85
Enterobacter asburiae PDN3 0.10 EX28DRAFT_4379 formate dehydrogenase family accessory protein FdhD 0.79 EX28DRAFT_4140 phosphoenolpyruvate carboxykinase (ATP) low > 76
Pseudomonas fluorescens GW456-L13 0.10 PfGW456L13_408 Formate dehydrogenase chain D (EC 1.2.1.2) 0.33 PfGW456L13_420 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 87
Pseudomonas aeruginosa PA14 0.09 IKLFDK_27585 formate dehydrogenase accessory sulfurtransferase FdhD 0.34 IKLFDK_27515 phosphoenolpyruvate carboxykinase low > 100
Pseudomonas sp. RS175 0.09 PFR28_04882 Sulfur carrier protein FdhD 0.34 PFR28_04874 Phosphoenolpyruvate carboxykinase (ATP) low > 88
Pseudomonas fluorescens FW300-N1B4 0.09 Pf1N1B4_1673 Formate dehydrogenase chain D (EC 1.2.1.2) 0.34 Pf1N1B4_1779 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) — —

Not shown: 25 genomes with orthologs for CSW01_07625 only; 37 genomes with orthologs for CSW01_13810 only