Conservation of cofitness between CSW01_01415 and CSW01_11600 in Vibrio cholerae E7946 ATCC 55056

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01415 phosphoribosylamine--glycine ligase 1.0 CSW01_11600 aminoacyl-histidine dipeptidase 0.55 6
Enterobacter sp. TBS_079 0.80 MPMX20_00225 Phosphoribosylamine--glycine ligase 0.63 MPMX20_00922 Cytosol non-specific dipeptidase low > 85
Enterobacter asburiae PDN3 0.80 EX28DRAFT_4544 phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.64 EX28DRAFT_2656 Xaa-His dipeptidase 0.50 22
Serratia liquefaciens MT49 0.79 IAI46_01360 phosphoribosylamine--glycine ligase 0.63 IAI46_04410 beta-Ala-His dipeptidase low > 87
Escherichia coli BW25113 0.79 b4005 purD phosphoribosylamine--glycine ligase (NCBI) 0.63 b0237 pepD aminoacyl-histidine dipeptidase (peptidase D) (NCBI) low > 76
Klebsiella pneumoniae MKP103 0.79 KDGMDA_10095 phosphoribosylamine--glycine ligase 0.61 KDGMDA_13800 cytosol nonspecific dipeptidase low > 94
Pectobacterium carotovorum WPP14 0.79 HER17_RS20340 phosphoribosylamine--glycine ligase 0.62 HER17_RS04675 beta-Ala-His dipeptidase low > 75
Escherichia coli ECOR27 0.79 NOLOHH_05460 purD Phosphoribosylamine--glycine ligase 0.63 NOLOHH_02075 pepD cytosol nonspecific dipeptidase low > 75
Dickeya dadantii 3937 0.79 DDA3937_RS01215 phosphoribosylamine--glycine ligase 0.63 DDA3937_RS16570 beta-Ala-His dipeptidase low > 74
Dickeya dianthicola 67-19 0.79 HGI48_RS01210 phosphoribosylamine--glycine ligase 0.63 HGI48_RS16640 beta-Ala-His dipeptidase low > 71
Escherichia fergusonii Becca 0.79 EFB2_04605 Phosphoribosylamine--glycine ligase 0.63 EFB2_03783 Cytosol non-specific dipeptidase low > 86
Klebsiella pneumoniae MRSN742743 0.79 GJGHJB_04747 purD Phosphoribosylamine--glycine ligase 0.62 GJGHJB_04030 pepD cytosol nonspecific dipeptidase low > 83
Pantoea sp. MT58 0.79 IAI47_18045 phosphoribosylamine--glycine ligase 0.61 IAI47_15145 beta-Ala-His dipeptidase low > 76
Escherichia coli Nissle 1917 0.79 ECOLIN_RS23095 phosphoribosylamine--glycine ligase 0.64 ECOLIN_RS01800 cytosol nonspecific dipeptidase low > 55
Dickeya dianthicola ME23 0.79 DZA65_RS01255 phosphoribosylamine--glycine ligase 0.63 DZA65_RS17730 beta-Ala-His dipeptidase low > 75
Escherichia coli ECRC102 0.79 NIAGMN_11065 purD Phosphoribosylamine--glycine ligase 0.64 NIAGMN_07560 pepD cytosol nonspecific dipeptidase low > 80
Escherichia coli ECRC100 0.79 OKFHMN_13315 purD Phosphoribosylamine--glycine ligase 0.64 OKFHMN_09700 pepD cytosol nonspecific dipeptidase low > 79
Escherichia coli ECRC98 0.79 JDDGAC_16940 purD Phosphoribosylamine--glycine ligase 0.64 JDDGAC_13325 pepD cytosol nonspecific dipeptidase low > 87
Escherichia coli ECRC101 0.79 MCAODC_03815 purD Phosphoribosylamine--glycine ligase 0.64 MCAODC_00220 pepD cytosol nonspecific dipeptidase low > 87
Escherichia coli ECRC99 0.79 KEDOAH_14845 purD Phosphoribosylamine--glycine ligase 0.64 KEDOAH_18455 pepD cytosol nonspecific dipeptidase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_04044 Phosphoribosylamine--glycine ligase 0.63 OHPLBJKB_03403 Cytosol non-specific dipeptidase low > 74
Escherichia coli ECRC62 0.79 BNILDI_06060 purD Phosphoribosylamine--glycine ligase 0.63 BNILDI_00270 pepD cytosol nonspecific dipeptidase low > 75
Escherichia coli BL21 0.79 ECD_03882 phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase 0.63 ECD_00232 aminoacyl-histidine dipeptidase (peptidase D) low > 61
Pantoea agglomerans CFBP13505 P0401 0.79 PagCFBP13516_RS18290 purD phosphoribosylamine--glycine ligase 0.61 PagCFBP13516_RS15445 pepD beta-Ala-His dipeptidase low > 80
Escherichia coli ECOR38 0.78 HEPCGN_11955 purD Phosphoribosylamine--glycine ligase 0.64 HEPCGN_07805 pepD cytosol nonspecific dipeptidase low > 88
Erwinia amylovora T8 0.78 OLJFJH_06780 phosphoribosylamine--glycine ligase 0.62 OLJFJH_18435 cytosol nonspecific dipeptidase low > 58
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.78 GFF4187 Phosphoribosylamine--glycine ligase (EC 6.3.4.13) 0.63 GFF4108 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) low > 78
Klebsiella michiganensis M5al 0.78 BWI76_RS01610 phosphoribosylamine--glycine ligase 0.63 BWI76_RS05540 cytosol nonspecific dipeptidase low > 92
Erwinia tracheiphila HP pepo 2.2 0.77 IJEDHG_10925 purD phosphoribosylamine--glycine ligase 0.60 IJEDHG_15460 pepD cytosol nonspecific dipeptidase low > 61
Rahnella sp. WP5 0.77 EX31_RS16855 phosphoribosylamine--glycine ligase 0.61 EX31_RS21000 beta-Ala-His dipeptidase low > 89
Erwinia tracheiphila SCR3 0.77 LU632_RS01015 purD phosphoribosylamine--glycine ligase 0.60 LU632_RS01155 pepD beta-Ala-His dipeptidase low > 73
Shewanella amazonensis SB2B 0.73 Sama_0394 phosphoribosylamine--glycine ligase (RefSeq) 0.62 Sama_2519 Xaa-His dipeptidase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.71 SO0441 purD phosphoribosylamine--glycine ligase (NCBI ptt file) 0.61 SO1115 pepD dipeptidase (EC 3.4.13.-) (from data) low > 76
Shewanella sp. ANA-3 0.71 Shewana3_0440 phosphoribosylamine--glycine ligase (RefSeq) 0.60 Shewana3_0950 M20C family Xaa-His dipeptidase (RefSeq) low > 73
Shewanella loihica PV-4 0.69 Shew_3413 phosphoribosylamine--glycine ligase (RefSeq) 0.64 Shew_2852 aminoacyl-histidine dipeptidase (RefSeq) low > 60
Acinetobacter baumannii LAC-4 0.66 RR41_RS06690 phosphoribosylamine--glycine ligase 0.41 RR41_RS06225 aminoacyl-histidine dipeptidase — —
Dechlorosoma suillum PS 0.63 Dsui_1596 phosphoribosylamine--glycine ligase 0.41 Dsui_2777 aminoacyl-histidine dipeptidase — —
Bacteroides thetaiotaomicron VPI-5482 0.45 BT3253 phosphoribosylamine--glycine ligase (NCBI ptt file) 0.46 BT1615 aminoacyl-histidine dipeptidase (NCBI ptt file) low > 81
Parabacteroides merdae CL09T00C40 0.45 HMPREF1078_RS06805 phosphoribosylamine--glycine ligase 0.45 HMPREF1078_RS04870 aminoacyl-histidine dipeptidase low > 61
Bacteroides ovatus ATCC 8483 0.45 BACOVA_01348 phosphoribosylamine--glycine ligase 0.46 BACOVA_04354 Xaa-His dipeptidase low > 96
Bacteroides stercoris CC31F 0.44 HMPREF1181_RS01580 phosphoribosylamine--glycine ligase 0.46 HMPREF1181_RS09110 aminoacyl-histidine dipeptidase low > 56
Fusobacterium nucleatum SB010 0.44 HUW76_05205 phosphoribosylamine--glycine ligase 0.31 HUW76_03860 aminoacyl-histidine dipeptidase low > 35
Phocaeicola dorei CL03T12C01 0.44 ABI39_RS06055 phosphoribosylamine--glycine ligase 0.45 ABI39_RS11885 aminoacyl-histidine dipeptidase low > 72
Phocaeicola vulgatus CL09T03C04 0.44 HMPREF1058_RS10995 phosphoribosylamine--glycine ligase 0.46 HMPREF1058_RS15925 aminoacyl-histidine dipeptidase low > 67
Cellulophaga baltica 18 0.44 M666_RS05515 phosphoribosylamine--glycine ligase 0.43 M666_RS10985 aminoacyl-histidine dipeptidase low > 67
Pontibacter actiniarum KMM 6156, DSM 19842 0.43 CA264_20115 phosphoribosylamine--glycine ligase 0.43 CA264_03200 aminoacyl-histidine dipeptidase low > 74

Not shown: 78 genomes with orthologs for CSW01_01415 only; 0 genomes with orthologs for CSW01_11600 only