Conservation of cofitness between CSW01_10675 and CSW01_10660 in Vibrio cholerae E7946 ATCC 55056

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10675 flagellar protein FliS 1.0 CSW01_10660 sigma-54-dependent Fis family transcriptional regulator 0.93 7
Shewanella amazonensis SB2B 0.54 Sama_2302 fliS flagellar protein FliS (RefSeq) 0.58 Sama_2299 response regulator receiver protein (RefSeq) low > 62
Shewanella oneidensis MR-1 0.52 SO3233 fliS flagellar protein FliS (NCBI ptt file) 0.58 SO3230 flrC flagellar regulatory protein C (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.52 Shew_1361 fliS flagellar protein FliS (RefSeq) 0.58 Shew_1364 two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) 0.96 23
Shewanella sp. ANA-3 0.52 Shewana3_1337 fliS flagellar protein FliS (RefSeq) 0.58 Shewana3_1340 two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) low > 73
Pseudomonas aeruginosa PUPa3 0.44 DQ20_RS45860 fliS;go_component=bacterial-type flagellar export chaperone FliS 0.49 DQ20_RS45880 fleR;inference=COORDINATES sigma-54-dependent response regulator transcription factor FleR low > 101
Pseudomonas sp. S08-1 0.43 OH686_02865 flagellar protein FliS 0.51 OH686_02845 Flagellar two-component response regulator FleR low > 80
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_18650 flagellar export chaperone FliS 0.50 AO353_18670 Fis family transcriptional regulator 0.73 23
Pseudomonas putida KT2440 0.40 PP_4375 flagellar chaperone, inhibits premature FliC assembly 0.48 PP_4371 two component system AtoC DNA-binding transcriptional activator 0.53 39
Pseudomonas stutzeri RCH2 0.40 Psest_2504 flagellar biosynthetic protein FliS 0.50 Psest_1767 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains low > 67
Pseudomonas segetis P6 0.40 MPMX49_03152 Flagellar secretion chaperone FliS 0.51 MPMX49_03148 Regulatory protein AtoC low > 75
Pseudomonas sp. RS175 0.40 PFR28_00826 Flagellar secretion chaperone FliS 0.50 PFR28_00830 Regulatory protein AtoC 0.59 36
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.39 GFF4027 Flagellar biosynthesis protein FliS 0.31 GFF2455 Putative sensory histidine kinase YfhA low > 78
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_2599 Flagellar biosynthesis protein FliS 0.50 Pf6N2E2_2595 Flagellar regulatory protein FleQ 0.59 52
Marinobacter adhaerens HP15 0.39 HP15_2368 flagellar protein FliS 0.51 HP15_2328 two component, sigma54 specific, transcriptional regulator, Fis family 0.78 20
Pseudomonas simiae WCS417 0.38 PS417_19835 flagellar biosynthesis protein FliS 0.49 PS417_19815 Fis family transcriptional regulator
Pseudomonas aeruginosa MRSN321 0.38 DY961_RS06975 fliS;go_component=bacterial-type flagellar export chaperone FliS 0.49 DY961_RS06955 fleR;inference=COORDINATES sigma-54-dependent response regulator transcription factor FleR 0.58 8
Pseudomonas aeruginosa PA14 0.38 IKLFDK_05035 flagellar protein FliS 0.49 IKLFDK_05055 sigma-54-dependent response regulator transcription factor FleR 0.81 9
Pseudomonas lactucae CFBP13502 0.38 GEMAOFIL_04165 Flagellar secretion chaperone FliS 0.49 GEMAOFIL_04161 Regulatory protein AtoC low > 96
Pseudomonas fluorescens SBW25 0.38 PFLU_RS21805 flagellar export chaperone FliS 0.49 PFLU_RS21785 sigma-54-dependent Fis family transcriptional regulator low > 109
Pseudomonas orientalis W4I3 0.38 QF045_RS21965 flagellar export chaperone FliS 0.49 QF045_RS21945 sigma-54 dependent transcriptional regulator low > 93
Serratia liquefaciens MT49 0.38 IAI46_15800 flagellar export chaperone FliS 0.31 IAI46_19460 two-component system response regulator GlrR low > 87
Pseudomonas fluorescens SBW25-INTG 0.38 PFLU_RS21805 flagellar export chaperone FliS 0.49 PFLU_RS21785 sigma-54-dependent Fis family transcriptional regulator 0.54 38
Pseudomonas fluorescens FW300-N2C3 0.37 AO356_03865 flagellar export chaperone FliS 0.48 AO356_03845 Fis family transcriptional regulator 0.66 49
Enterobacter sp. TBS_079 0.37 MPMX20_02856 Flagellar secretion chaperone FliS 0.30 MPMX20_03423 Transcriptional regulatory protein QseF low > 85
Pseudomonas sp. DMC3 0.37 GFF2443 Flagellar secretion chaperone FliS 0.50 GFF2447 Regulatory protein AtoC low > 89
Pseudomonas sp. SVBP6 0.37 COO64_RS21310 fliS flagellar export chaperone FliS 0.48 COO64_RS21290 sigma-54 dependent transcriptional regulator low > 93
Pseudomonas sp. BP01 0.36 JOY50_RS00715 fliS flagellar export chaperone FliS 0.49 JOY50_RS00695 sigma-54 dependent transcriptional regulator low > 84
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_3463 Flagellar protein FliS 0.48 Psyr_3459 Helix-turn-helix, Fis-type low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_3463 Flagellar protein FliS 0.48 Psyr_3459 Helix-turn-helix, Fis-type low > 86
Alteromonas macleodii MIT1002 0.32 MIT1002_01057 Flagellar protein FliS 0.61 MIT1002_01083 Transcriptional regulatory protein ZraR low > 70
Enterobacter asburiae PDN3 0.30 EX28DRAFT_0621 flagellar biosynthetic protein FliS 0.30 EX28DRAFT_0096 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains low > 76
Escherichia coli ECRC99 0.27 KEDOAH_02325 fliS flagellar export chaperone FliS 0.30 KEDOAH_06725 qseF two-component system response regulator QseF/GlrR
Escherichia coli ECRC100 0.27 OKFHMN_25765 fliS flagellar export chaperone FliS 0.30 OKFHMN_21495 qseF two-component system response regulator QseF/GlrR 0.48 78
Escherichia coli ECRC101 0.27 MCAODC_19625 fliS flagellar export chaperone FliS 0.30 MCAODC_12025 qseF two-component system response regulator QseF/GlrR 0.39 1
Escherichia coli ECRC102 0.27 NIAGMN_02285 fliS flagellar export chaperone FliS 0.30 NIAGMN_19265 qseF two-component system response regulator QseF/GlrR low > 80
Escherichia coli ECRC98 0.27 JDDGAC_00355 fliS flagellar export chaperone FliS 0.30 JDDGAC_25160 qseF two-component system response regulator QseF/GlrR low > 87
Escherichia coli ECRC62 0.27 BNILDI_15175 fliS flagellar export chaperone FliS 0.30 BNILDI_11970 qseF two-component system response regulator QseF/GlrR low > 75

Not shown: 39 genomes with orthologs for CSW01_10675 only; 12 genomes with orthologs for CSW01_10660 only