Conservation of cofitness between CSW01_03410 and CSW01_10020 in Vibrio cholerae E7946 ATCC 55056

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03410 polyribonucleotide nucleotidyltransferase 1.0 CSW01_10020 ROK family protein 0.83 6
Pantoea sp. MT58 0.78 IAI47_17005 polyribonucleotide nucleotidyltransferase 0.45 IAI47_09750 ROK family transcriptional regulator low > 76
Klebsiella michiganensis M5al 0.77 BWI76_RS25065 polyribonucleotide nucleotidyltransferase 0.47 BWI76_RS15955 transcriptional regulator low > 92
Dickeya dadantii 3937 0.77 DDA3937_RS03090 polyribonucleotide nucleotidyltransferase 0.50 DDA3937_RS10675 ROK family transcriptional regulator low > 74
Klebsiella pneumoniae MKP103 0.77 KDGMDA_05875 polyribonucleotide nucleotidyltransferase 0.48 KDGMDA_21230 transcriptional regulator low > 95
Pantoea agglomerans CFBP13505 P0401 0.77 PagCFBP13505_RS09100 polyribonucleotide nucleotidyltransferase 0.45 PagCFBP13505_RS06405 ROK family transcriptional regulator low > 74
Enterobacter asburiae PDN3 0.77 EX28DRAFT_3213 polyribonucleotide nucleotidyltransferase 0.48 EX28DRAFT_1493 Transcriptional regulator/sugar kinase — —
Dickeya dianthicola 67-19 0.77 HGI48_RS03260 polyribonucleotide nucleotidyltransferase 0.49 HGI48_RS10675 ROK family transcriptional regulator low > 71
Dickeya dianthicola ME23 0.77 DZA65_RS03255 polyribonucleotide nucleotidyltransferase 0.49 DZA65_RS11145 ROK family transcriptional regulator low > 75
Escherichia coli BW25113 0.77 b3164 pnp polynucleotide phosphorylase/polyadenylase (RefSeq) 0.46 b1594 dgsA DNA-binding transcriptional repressor (NCBI) low > 76
Escherichia coli BL21 0.77 ECD_03031 polynucleotide phosphorylase/polyadenylase 0.46 ECD_01563 glucosamine anaerobic growth regulon transcriptional repressor; autorepressor — —
Enterobacter sp. TBS_079 0.77 MPMX20_04068 Polyribonucleotide nucleotidyltransferase 0.47 MPMX20_02063 Protein mlc — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.77 OHPLBJKB_00536 Polyribonucleotide nucleotidyltransferase 0.46 OHPLBJKB_02132 Protein mlc low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF1502 Polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) 0.47 GFF1785 Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon low > 78
Escherichia coli ECOR27 0.77 NOLOHH_09940 pnp polyribonucleotide nucleotidyltransferase 0.47 NOLOHH_18245 mlc DNA-binding transcriptional repressor Mlc low > 76
Escherichia coli ECOR38 0.77 HEPCGN_17015 pnp polyribonucleotide nucleotidyltransferase 0.47 HEPCGN_06115 mlc DNA-binding transcriptional repressor Mlc — —
Escherichia coli ECRC62 0.77 BNILDI_01595 pnp polyribonucleotide nucleotidyltransferase 0.47 BNILDI_17035 mlc DNA-binding transcriptional repressor Mlc low > 75
Escherichia coli ECRC102 0.77 NIAGMN_15900 pnp polyribonucleotide nucleotidyltransferase 0.47 NIAGMN_00335 mlc DNA-binding transcriptional repressor Mlc — —
Escherichia coli ECRC99 0.77 KEDOAH_10010 pnp polyribonucleotide nucleotidyltransferase 0.47 KEDOAH_00365 mlc DNA-binding transcriptional repressor Mlc — —
Escherichia coli ECRC98 0.77 JDDGAC_21765 pnp polyribonucleotide nucleotidyltransferase 0.47 JDDGAC_02330 mlc DNA-binding transcriptional repressor Mlc low > 87
Escherichia coli ECRC101 0.77 MCAODC_08660 pnp polyribonucleotide nucleotidyltransferase 0.47 MCAODC_17670 mlc DNA-binding transcriptional repressor Mlc low > 87
Escherichia coli ECRC100 0.77 OKFHMN_18140 pnp polyribonucleotide nucleotidyltransferase 0.47 OKFHMN_27740 mlc DNA-binding transcriptional repressor Mlc low > 79
Escherichia coli Nissle 1917 0.77 ECOLIN_RS18175 polyribonucleotide nucleotidyltransferase 0.47 ECOLIN_RS08905 sugar metabolism global transcriptional regulator Mlc — —
Erwinia tracheiphila HP pepo 2.2 0.77 IJEDHG_13960 pnp polyribonucleotide nucleotidyltransferase 0.47 IJEDHG_23280 transcriptional regulator — —
Erwinia tracheiphila SCR3 0.77 LU632_RS21040 pnp polyribonucleotide nucleotidyltransferase 0.47 LU632_RS12305 ROK family transcriptional regulator — —
Escherichia fergusonii Becca 0.77 EFB2_00659 Polyribonucleotide nucleotidyltransferase 0.47 EFB2_02398 Protein mlc low > 86
Rahnella sp. WP5 0.76 EX31_RS08520 polyribonucleotide nucleotidyltransferase 0.50 EX31_RS16985 ROK family transcriptional regulator low > 89
Erwinia amylovora T8 0.76 OLJFJH_07265 polyribonucleotide nucleotidyltransferase 0.48 OLJFJH_14275 transcriptional regulator low > 58
Pectobacterium carotovorum WPP14 0.76 HER17_RS18190 polyribonucleotide nucleotidyltransferase 0.50 HER17_RS10735 ROK family transcriptional regulator — —
Serratia liquefaciens MT49 0.76 IAI46_01955 polyribonucleotide nucleotidyltransferase 0.50 IAI46_11685 ROK family transcriptional regulator low > 87
Dyella japonica UNC79MFTsu3.2 0.63 ABZR86_RS06005 polyribonucleotide nucleotidyltransferase 0.14 ABZR86_RS19180 ROK family transcriptional regulator — —
Variovorax sp. OAS795 0.63 ABID97_RS20520 polyribonucleotide nucleotidyltransferase 0.17 ABID97_RS00440 ROK family protein 0.45 83
Azospirillum brasilense Sp245 0.55 AZOBR_RS01385 polynucleotide phosphorylase 0.17 AZOBR_RS27950 transcriptional regulator — —
Sinorhizobium meliloti 1021 0.55 SMc00324 polynucleotide phosphorylase/polyadenylase 0.15 SMa2303 ROK family transcriptional regulator — —
Bosea sp. OAE506 0.54 ABIE41_RS04595 polyribonucleotide nucleotidyltransferase 0.18 ABIE41_RS06840 ROK family protein — —
Caulobacter crescentus NA1000 Δfur 0.54 CCNA_00033 polyribonucleotide nucleotidyltransferase/polynucleotide adenylyltransferase 0.09 CCNA_01870 NagC-family transcriptional regulator — —
Caulobacter crescentus NA1000 0.54 CCNA_00033 polyribonucleotide nucleotidyltransferase/polynucleotide adenylyltransferase 0.09 CCNA_01870 NagC-family transcriptional regulator — —
Phaeobacter inhibens DSM 17395 0.52 PGA1_c33000 polyribonucleotide nucleotidyltransferase Pnp 0.19 PGA1_262p00420 Transcriptional regulator/sugar kinase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.40 CA264_04880 polyribonucleotide nucleotidyltransferase 0.20 CA264_08710 sugar kinase — —
Bacteroides thetaiotaomicron VPI-5482 0.40 BT2563 polyribonucleotide nucleotidyltransferase (NCBI ptt file) 0.17 BT0433 putative xylose repressor (NCBI ptt file) — —
Phocaeicola vulgatus CL09T03C04 0.40 HMPREF1058_RS12555 polyribonucleotide nucleotidyltransferase 0.18 HMPREF1058_RS07285 ROK family transcriptional regulator — —
Phocaeicola dorei CL03T12C01 0.40 ABI39_RS04155 polyribonucleotide nucleotidyltransferase 0.18 ABI39_RS21185 ROK family transcriptional regulator — —
Bacteroides ovatus ATCC 8483 0.40 BACOVA_01641 polyribonucleotide nucleotidyltransferase 0.18 BACOVA_01791 hypothetical protein — —
Bacteroides stercoris CC31F 0.40 HMPREF1181_RS00815 polyribonucleotide nucleotidyltransferase 0.17 HMPREF1181_RS04110 ROK family transcriptional regulator — —
Parabacteroides merdae CL09T00C40 0.38 HMPREF1078_RS17715 polyribonucleotide nucleotidyltransferase 0.19 HMPREF1078_RS06205 ROK family transcriptional regulator — —

Not shown: 76 genomes with orthologs for CSW01_03410 only; 1 genomes with orthologs for CSW01_10020 only