| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_19025 | | LysR family transcriptional regulator | 1.0 | CSW01_09980 | | D-hexose-6-phosphate mutarotase | 0.47 | 11 |
| Alteromonas macleodii MIT1002 | 0.76 | MIT1002_03329 | | D-malate degradation protein R | 0.30 | MIT1002_02402 | | Putative glucose-6-phosphate 1-epimerase | low | > 70 |
| Serratia liquefaciens MT49 | 0.55 | IAI46_20610 | | LysR family transcriptional regulator | 0.35 | IAI46_14360 | | D-hexose-6-phosphate mutarotase | low | > 87 |
| Shewanella oneidensis MR-1 | 0.38 | SO0369 | | transcriptional regulator, LysR family (NCBI ptt file) | 0.25 | SO2769 | | conserved hypothetical protein (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.37 | Shewana3_3800 | | LysR family transcriptional regulator (RefSeq) | 0.26 | Shewana3_2553 | | aldose 1-epimerase (RefSeq) | low | > 73 |
| Pseudomonas sp. FW215-L2 | 0.33 | GFF3184 | | HTH-type transcriptional regulator DmlR | 0.27 | GFF1215 | | Putative glucose-6-phosphate 1-epimerase | low | > 111 |
| Pseudomonas fluorescens SBW25-INTG | 0.33 | PFLU_RS18050 | | LysR family transcriptional regulator | 0.25 | PFLU_RS29785 | | D-hexose-6-phosphate mutarotase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.33 | PFLU_RS18050 | | LysR family transcriptional regulator | 0.25 | PFLU_RS29785 | | D-hexose-6-phosphate mutarotase | low | > 109 |
| Pseudomonas syringae pv. syringae B728a | 0.32 | Psyr_2951 | | transcriptional regulator, LysR family | 0.28 | Psyr_5044 | | Aldose 1-epimerase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.32 | Psyr_2951 | | transcriptional regulator, LysR family | 0.28 | Psyr_5044 | | Aldose 1-epimerase | low | > 86 |
| Pseudomonas fluorescens FW300-N1B4 | 0.32 | Pf1N1B4_5905 | | Transcriptional regulator, LysR family | 0.29 | Pf1N1B4_2031 | | Aldose 1-epimerase | low | > 87 |
| Pseudomonas putida KT2440 | 0.32 | PP_3811 | | Transcriptional regulator, LysR family | 0.30 | PP_5332 | | conserved protein of unknown function | low | > 96 |
| Pseudomonas orientalis W4I3 | 0.32 | QF045_RS13895 | | LysR family transcriptional regulator | 0.26 | QF045_RS02455 | | D-hexose-6-phosphate mutarotase | low | > 93 |
| Herbaspirillum seropedicae SmR1 | 0.32 | HSERO_RS02935 | | LysR family transcriptional regulator | 0.25 | HSERO_RS07395 | | aldose 1-epimerase | low | > 78 |
| Pseudomonas fluorescens FW300-N2E2 | 0.32 | Pf6N2E2_259 | | Transcriptional regulator, LysR family | 0.30 | Pf6N2E2_4078 | | Aldose 1-epimerase | low | > 103 |
| Pseudomonas lactucae CFBP13502 | 0.32 | GEMAOFIL_02593 | | HTH-type transcriptional regulator DmlR | 0.25 | GEMAOFIL_00086 | | Putative glucose-6-phosphate 1-epimerase | low | > 96 |
| Pseudomonas simiae WCS417 | 0.32 | PS417_16085 | | LysR family transcriptional regulator | 0.27 | PS417_28100 | | glucose-6-phosphate 1-epimerase [EC: 5.1.3.15] (from data) | low | > 88 |
| Pseudomonas fluorescens GW456-L13 | 0.32 | PfGW456L13_3857 | | Transcriptional regulator, LysR family | 0.30 | PfGW456L13_750 | | Aldose 1-epimerase | low | > 87 |
| Pseudomonas sp. DMC3 | 0.32 | GFF943 | | HTH-type transcriptional regulator DmlR | 0.29 | GFF482 | | Putative glucose-6-phosphate 1-epimerase | low | > 89 |
| Pseudomonas sp. BP01 | 0.32 | JOY50_RS04745 | | LysR family transcriptional regulator | 0.31 | JOY50_RS08840 | | D-hexose-6-phosphate mutarotase | low | > 84 |
| Pseudomonas fluorescens FW300-N2C3 | 0.31 | AO356_21990 | | LysR family transcriptional regulator | 0.29 | AO356_11060 | | aldose epimerase | low | > 104 |
| Pseudomonas aeruginosa PA14 | 0.31 | IKLFDK_11955 | | LysR family transcriptional regulator | 0.27 | IKLFDK_26315 | | D-hexose-6-phosphate mutarotase | low | > 98 |
| Pseudomonas aeruginosa PUPa3 | 0.31 | NPBIFN_02690 | bexR | Bistable expression regulator BexR | 0.27 | NPBIFN_05755 | | Putative glucose-6-phosphate 1-epimerase | low | > 101 |
| Pseudomonas fluorescens FW300-N2E3 | 0.31 | AO353_22295 | | LysR family transcriptional regulator | 0.29 | AO353_09920 | | aldose epimerase | low | > 101 |
| Pseudomonas aeruginosa MRSN321 | 0.31 | PFGADD_02658 | bexR | Bistable expression regulator BexR | 0.27 | PFGADD_05679 | | Putative glucose-6-phosphate 1-epimerase | low | > 99 |
| Pseudomonas sp. S08-1 | 0.31 | OH686_18145 | | Transcriptional regulator, LysR family, in formaldehyde detoxification operon | 0.26 | OH686_13395 | | Aldose 1-epimerase family protein YeaD | low | > 80 |
| Rahnella sp. WP5 | 0.30 | EX31_RS16730 | | LysR family transcriptional regulator | 0.37 | EX31_RS06275 | | D-hexose-6-phosphate mutarotase | low | > 89 |
| Pseudomonas sp. RS175 | 0.30 | PFR28_00531 | | HTH-type transcriptional regulator DmlR | 0.28 | PFR28_04492 | | Putative glucose-6-phosphate 1-epimerase | low | > 88 |
| Pseudomonas protegens RBAN4 | 0.30 | FABNJH_06195 | dmlR | HTH-type transcriptional regulator DmlR | 0.30 | FABNJH_30880 | | Putative glucose-6-phosphate 1-epimerase | — | — |
| Pseudomonas segetis P6 | 0.29 | ACVTMO_RS17005 | | LysR substrate-binding domain-containing protein | 0.28 | ACVTMO_RS00630 | | D-hexose-6-phosphate mutarotase | low | > 75 |
| Klebsiella pneumoniae MKP103 | 0.28 | KDGMDA_05040 | | LysR family transcriptional regulator | 0.31 | KDGMDA_19175 | | D-hexose-6-phosphate mutarotase | low | > 94 |
| Klebsiella pneumoniae MRSN742743 | 0.28 | GJGHJB_00706 | lysR | LysR family transcriptional regulator | 0.31 | GJGHJB_03007 | yeaD | Putative glucose-6-phosphate 1-epimerase | low | > 83 |
| Klebsiella michiganensis M5al | 0.27 | BWI76_RS27965 | | LysR family transcriptional regulator | 0.31 | BWI76_RS11500 | | D-hexose-6-phosphate mutarotase | low | > 92 |
| Pantoea agglomerans CFBP13505 P0401 | 0.27 | PagCFBP13516_RS17015 | | LysR family transcriptional regulator | 0.34 | PagCFBP13516_RS09075 | | D-hexose-6-phosphate mutarotase | low | > 80 |
| Dickeya dianthicola 67-19 | 0.26 | HGI48_RS19010 | | LysR family transcriptional regulator | 0.33 | HGI48_RS10270 | | D-hexose-6-phosphate mutarotase | low | > 71 |
| Erwinia amylovora T8 | 0.25 | OLJFJH_06945 | | HTH-type transcriptional activator AaeR | 0.31 | OLJFJH_13215 | | D-hexose-6-phosphate mutarotase | low | > 58 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.25 | GFF2141 | | LysR family transcriptional regulator QseA | 0.30 | GFF3477 | | Aldose 1-epimerase family protein YeaD | low | > 78 |
| Escherichia fergusonii Becca | 0.25 | EFB2_00287 | | HTH-type transcriptional regulator DmlR | 0.32 | EFB2_02214 | | Putative glucose-6-phosphate 1-epimerase | low | > 86 |
| Escherichia coli BL21 | 0.25 | ECD_03369 | | LysR family putative transcriptional regulator | 0.32 | ECD_01749 | | D-hexose-6-phosphate epimerase-like protein | low | > 61 |
| Escherichia coli Nissle 1917 | 0.25 | ECOLIN_RS20140 | | LysR family transcriptional regulator | 0.32 | ECOLIN_RS09925 | | D-hexose-6-phosphate mutarotase | — | — |
| Escherichia coli ECRC62 | 0.25 | BNILDI_03360 | yhjC | Uncharacterized HTH-type transcriptional regulator YhjC | 0.32 | BNILDI_16040 | yeaD | Putative glucose-6-phosphate 1-epimerase | low | > 75 |
| Escherichia coli ECOR27 | 0.25 | NOLOHH_08195 | yhjC | Uncharacterized HTH-type transcriptional regulator YhjC | 0.32 | NOLOHH_17255 | yeaD | Putative glucose-6-phosphate 1-epimerase | low | > 75 |
| Escherichia coli BW25113 | 0.25 | b3521 | yhjC | predicted DNA-binding transcriptional regulator (RefSeq) | 0.32 | b1780 | yeaD | orf, hypothetical protein (VIMSS) | low | > 76 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.25 | OHPLBJKB_00181 | | HTH-type transcriptional regulator DmlR | 0.32 | OHPLBJKB_01952 | | Putative glucose-6-phosphate 1-epimerase | low | > 74 |
Not shown: 28 genomes with orthologs for CSW01_19025 only; 16 genomes with orthologs for CSW01_09980 only