| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_14595 | | type VI secretion system ATPase TssH | 1.0 | CSW01_09555 | | tRNA-(ms[2]io[6]A)-hydroxylase | 0.55 | 5 |
| Marinobacter adhaerens HP15 | 0.63 | HP15_3467 | | type VI secretion ATPase, ClpV1 family | 0.35 | HP15_2202 | | tRNA-(ms(2)io(6)a)-hydroxylase | low | > 73 |
| Dickeya dadantii 3937 | 0.59 | DDA3937_RS07060 | | type VI secretion system ATPase TssH | 0.69 | DDA3937_RS05765 | | tRNA-(ms[2]io[6]A)-hydroxylase | low | > 74 |
| Erwinia tracheiphila HP pepo 2.2 | 0.52 | IJEDHG_02670 | | Type VI secretion system ATPase TssH | 0.60 | IJEDHG_14135 | | tRNA-(ms[2]io[6]A)-hydroxylase | low | > 61 |
| Pseudomonas fluorescens FW300-N1B4 | 0.43 | Pf1N1B4_2088 | | ClpB protein | 0.31 | Pf1N1B4_4567 | | tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) | low | > 87 |
| Pseudomonas sp. DMC3 | 0.43 | GFF452 | | Protein ClpV1 | 0.32 | GFF1701 | | hypothetical protein | low | > 89 |
| Pseudomonas fluorescens FW300-N2E3 | 0.43 | AO353_09415 | | ClpV1 family T6SS ATPase | 0.32 | AO353_22955 | | tRNA hydroxylase | low | > 101 |
| Pseudomonas fluorescens FW300-N2E2 | 0.42 | Pf6N2E2_4303 | | ClpB protein | 0.31 | Pf6N2E2_568 | | tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) | low | > 103 |
| Pseudomonas aeruginosa PA14 | 0.42 | IKLFDK_08005 | | ClpA/B-type protease | 0.34 | IKLFDK_08660 | | tRNA-(ms[2]io[6]A)-hydroxylase | low | > 98 |
| Pseudomonas aeruginosa PUPa3 | 0.41 | DQ20_RS54070 | tssH;go_component=type | type VI secretion system ATPase TssH | 0.35 | DQ20_RS54725 | | tRNA-(ms[2]io[6]A)-hydroxylase | low | > 101 |
| Pseudomonas aeruginosa MRSN321 | 0.41 | DY961_RS19975 | tssH;go_component=type | type VI secretion system ATPase TssH | 0.35 | DY961_RS20645 | | tRNA-(ms[2]io[6]A)-hydroxylase | low | > 100 |
| Pseudomonas segetis P6 | 0.40 | MPMX49_00137 | | Protein ClpV1 | 0.32 | MPMX49_02239 | | hypothetical protein | low | > 75 |
| Pseudomonas sp. S08-1 | 0.40 | OH686_12815 | | type VI secretion ATPase, ClpV1 family | 0.32 | OH686_03955 | | tRNA-(ms[2]io[6]A)-hydroxylase | low | > 80 |
| Pseudomonas fluorescens FW300-N2C3 | 0.40 | AO356_12155 | | ClpV1 family T6SS ATPase | 0.31 | AO356_24405 | | tRNA hydroxylase | low | > 104 |
| Pseudomonas stutzeri RCH2 | 0.40 | Psest_0125 | | type VI secretion ATPase, ClpV1 family | 0.31 | Psest_2306 | | Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA | low | > 67 |
| Pseudomonas fluorescens SBW25-INTG | 0.39 | PFLU_RS29660 | | type VI secretion system ATPase TssH | 0.31 | PFLU_RS17005 | | tRNA hydroxylase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.39 | PFLU_RS29660 | | type VI secretion system ATPase TssH | 0.31 | PFLU_RS17005 | | tRNA hydroxylase | low | > 109 |
| Pseudomonas syringae pv. syringae B728a | 0.39 | Psyr_4958 | | AAA ATPase, central region:Clp, N terminal:Clp, N terminal | 0.30 | Psyr_1728 | | tRNA--hydroxylase | low | > 86 |
| Pseudomonas lactucae CFBP13502 | 0.39 | GEMAOFIL_00064 | | Protein ClpV1 | 0.32 | GEMAOFIL_03299 | | hypothetical protein | low | > 96 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.39 | Psyr_4958 | | AAA ATPase, central region:Clp, N terminal:Clp, N terminal | 0.30 | Psyr_1728 | | tRNA--hydroxylase | low | > 86 |
| Pseudomonas orientalis W4I3 | 0.39 | QF045_RS02335 | | type VI secretion system ATPase TssH | 0.31 | QF045_RS14985 | | tRNA isopentenyl-2-thiomethyl-A-37 hydroxylase MiaE | low | > 93 |
| Pseudomonas simiae WCS417 | 0.38 | PS417_27980 | | ATPase AAA | 0.32 | PS417_14975 | | tRNA hydroxylase | low | > 88 |
| Enterobacter sp. TBS_079 | 0.38 | MPMX20_01633 | | Protein ClpV1 | 0.62 | MPMX20_00558 | | hypothetical protein | low | > 85 |
| Pseudomonas putida KT2440 | 0.38 | PP_3095 | | Protein ClpV1 | 0.32 | PP_2188 | | putative tRNA-(Ms(2)io(6)a)-hydroxylase | low | > 96 |
| Pseudomonas sp. BP01 | 0.38 | JOY50_RS19890 | tssH | type VI secretion system ATPase TssH | 0.33 | JOY50_RS12775 | | tRNA-(ms[2]io[6]A)-hydroxylase | low | > 84 |
| Enterobacter asburiae PDN3 | 0.38 | EX28DRAFT_0248 | | type VI secretion ATPase, ClpV1 family | 0.61 | EX28DRAFT_3463 | | Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA | low | > 76 |
| Acinetobacter radioresistens SK82 | 0.38 | MPMX26_00960 | | Protein ClpV1 | 0.31 | MPMX26_02151 | | hypothetical protein | low | > 36 |
| Rahnella sp. WP5 | 0.38 | EX31_RS01880 | | type VI secretion system ATPase TssH | 0.40 | EX31_RS22630 | | tRNA-(ms[2]io[6]A)-hydroxylase | low | > 89 |
| Klebsiella pneumoniae MKP103 | 0.38 | KDGMDA_20380 | | type VI secretion system ATPase TssH | 0.58 | KDGMDA_11510 | | tRNA-(ms[2]io[6]A)-hydroxylase | low | > 95 |
| Pantoea sp. MT58 | 0.37 | IAI47_17445 | | type VI secretion system ATPase TssH | 0.63 | IAI47_16820 | | tRNA-(ms[2]io[6]A)-hydroxylase | low | > 76 |
| Pseudomonas sp. RS175 | 0.37 | PFR28_04464 | | Protein ClpV1 | 0.31 | PFR28_02373 | | hypothetical protein | low | > 88 |
| Pantoea agglomerans CFBP13505 P0401 | 0.36 | PagCFBP13505_RS19825 | | type VI secretion system ATPase TssH | 0.63 | PagCFBP13505_RS08940 | | tRNA hydroxylase | low | > 74 |
| Pseudomonas sp. SVBP6 | 0.36 | COO64_RS00480 | tssH | type VI secretion system ATPase TssH | 0.34 | COO64_RS09940 | | tRNA-(ms[2]io[6]A)-hydroxylase | low | > 93 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.34 | GFF4054 | | ClpB protein | 0.62 | GFF942 | | tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) | low | > 78 |
| Serratia liquefaciens MT49 | 0.33 | IAI46_05600 | | type VI secretion system ATPase TssH | 0.65 | IAI46_02330 | | tRNA-(ms[2]io[6]A)-hydroxylase | low | > 87 |
Not shown: 31 genomes with orthologs for CSW01_14595 only; 12 genomes with orthologs for CSW01_09555 only