Conservation of cofitness between CSW01_11705 and CSW01_09515 in Vibrio cholerae E7946 ATCC 55056

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11705 MFS transporter 1.0 CSW01_09515 Na+/H+ antiporter NhaB 0.63 8
Alteromonas macleodii MIT1002 0.46 MIT1002_00655 muropeptide transporter 0.66 MIT1002_02580 Sodium/proton antiporter NhaB low > 70
Shewanella sp. ANA-3 0.27 Shewana3_0783 major facilitator transporter (RefSeq) 0.72 Shewana3_1634 nhaB sodium/proton antiporter (RefSeq) low > 73
Shewanella oneidensis MR-1 0.27 SO3814 ampG protein, putative (NCBI ptt file) 0.73 SO2886 nhaB Na+/H+ antiporter (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.27 Sama_2556 AmpG protein, putative (RefSeq) 0.70 Sama_1925 nhaB sodium/proton antiporter (RefSeq) low > 62
Shewanella loihica PV-4 0.26 Shew_2892 major facilitator transporter (RefSeq) 0.69 Shew_2175 nhaB sodium/proton antiporter (RefSeq) low > 60
Marinobacter adhaerens HP15 0.22 HP15_2363 major facilitator superfamily MFS_1 0.57 HP15_3668 sodium/proton antiporter — —
Pseudomonas sp. BP01 0.20 JOY50_RS15020 AmpG family muropeptide MFS transporter 0.51 JOY50_RS06640 nhaB sodium/proton antiporter NhaB low > 84
Serratia liquefaciens MT49 0.20 IAI46_04990 muropeptide MFS transporter AmpG 0.65 IAI46_14480 sodium/proton antiporter NhaB low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_03240 Protein AmpG 0.64 OHPLBJKB_02503 Na(+)/H(+) antiporter NhaB low > 74
Rahnella sp. WP5 0.20 EX31_RS22225 muropeptide MFS transporter AmpG 0.63 EX31_RS10510 sodium/proton antiporter NhaB low > 89
Escherichia coli ECOR27 0.20 NOLOHH_01290 ampG muropeptide MFS transporter AmpG 0.64 NOLOHH_20740 nhaB Na(+)/H(+) antiporter NhaB low > 76
Escherichia coli BL21 0.20 ECD_00384 muropeptide transporter 0.64 ECD_01161 sodium:proton antiporter low > 61
Escherichia coli ECRC62 0.20 BNILDI_22705 ampG muropeptide MFS transporter AmpG 0.64 BNILDI_18905 nhaB Na(+)/H(+) antiporter NhaB low > 75
Escherichia coli Nissle 1917 0.20 ECOLIN_RS02600 muropeptide MFS transporter AmpG 0.64 ECOLIN_RS07170 Na(+)/H(+) antiporter NhaB low > 55
Pseudomonas putida KT2440 0.20 PP_1355 Muropeptide permease AmpG 0.52 PP_4031 Na(+)/H(+) antiporter NhaB low > 96
Escherichia coli ECRC100 0.20 OKFHMN_08355 ampG muropeptide MFS transporter AmpG 0.64 OKFHMN_28275 nhaB Na(+)/H(+) antiporter NhaB — —
Escherichia coli ECRC102 0.20 NIAGMN_06410 ampG muropeptide MFS transporter AmpG 0.64 NIAGMN_27945 nhaB Na(+)/H(+) antiporter NhaB low > 80
Escherichia coli ECRC98 0.20 JDDGAC_12010 ampG muropeptide MFS transporter AmpG 0.64 JDDGAC_06235 nhaB Na(+)/H(+) antiporter NhaB low > 87
Escherichia coli BW25113 0.20 b0433 ampG muropeptide transporter (NCBI) 0.64 b1186 nhaB NhaB sodium/proton transporter (Katherine Huang) low > 76
Escherichia coli ECRC99 0.20 KEDOAH_19610 ampG muropeptide MFS transporter AmpG 0.64 KEDOAH_25290 nhaB Na(+)/H(+) antiporter NhaB — —
Escherichia coli ECOR38 0.20 HEPCGN_06970 ampG muropeptide MFS transporter AmpG 0.65 HEPCGN_24735 nhaB Na(+)/H(+) antiporter NhaB 0.54 76
Escherichia coli ECRC101 0.20 MCAODC_27580 ampG muropeptide MFS transporter AmpG 0.64 MCAODC_21895 nhaB Na(+)/H(+) antiporter NhaB low > 87
Escherichia fergusonii Becca 0.20 EFB2_03624 Anhydromuropeptide permease 0.64 EFB2_02746 Na(+)/H(+) antiporter NhaB low > 86
Enterobacter sp. TBS_079 0.20 MPMX20_01024 Anhydromuropeptide permease 0.62 MPMX20_02702 Na(+)/H(+) antiporter NhaB low > 85
Pseudomonas sp. DMC3 0.20 GFF2134 hypothetical protein 0.53 GFF3448 Na(+)/H(+) antiporter NhaB low > 89
Enterobacter asburiae PDN3 0.19 EX28DRAFT_2538 AmpG-like permease 0.63 EX28DRAFT_0763 Na+/H+ antiporter NhaB low > 76
Pseudomonas fluorescens GW456-L13 0.19 PfGW456L13_4645 AmpG permease 0.53 PfGW456L13_3003 Na+/H+ antiporter NhaB low > 87
Pseudomonas sp. SVBP6 0.19 COO64_RS11990 AmpG family muropeptide MFS transporter 0.54 COO64_RS24830 nhaB sodium/proton antiporter NhaB low > 93
Pectobacterium carotovorum WPP14 0.19 HER17_RS15870 muropeptide MFS transporter AmpG 0.66 HER17_RS11220 sodium/proton antiporter NhaB low > 75
Pseudomonas fluorescens FW300-N1B4 0.19 Pf1N1B4_3168 AmpG permease 0.52 Pf1N1B4_4728 Na+/H+ antiporter NhaB low > 87
Klebsiella michiganensis M5al 0.19 BWI76_RS06500 muropeptide transporter AmpG 0.65 BWI76_RS17750 Na+/H+ antiporter NhaB low > 92
Klebsiella pneumoniae MKP103 0.19 KDGMDA_14585 muropeptide MFS transporter AmpG 0.64 KDGMDA_25065 sodium/proton antiporter NhaB 0.57 80
Pseudomonas sp. RS175 0.19 PFR28_00495 hypothetical protein 0.54 PFR28_01676 Na(+)/H(+) antiporter NhaB low > 88
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.19 GFF4348 AmpG permease 0.65 GFF2807 Na+/H+ antiporter NhaB low > 78
Pseudomonas fluorescens FW300-N2C3 0.19 AO356_05555 AmpG family muropeptide MFS transporter 0.53 AO356_27840 sodium:proton antiporter low > 104
Pseudomonas fluorescens FW300-N2E3 0.19 AO353_16925 AmpG family muropeptide MFS transporter 0.54 AO353_25825 sodium:proton antiporter low > 101
Pseudomonas fluorescens FW300-N2E2 0.18 Pf6N2E2_2971 AmpG permease 0.54 Pf6N2E2_760 Na+/H+ antiporter NhaB low > 103
Pseudomonas sp. S08-1 0.14 OH686_08200 AmpG permease 0.51 OH686_03550 Na+ or Li+/H+ antiporter NhaB low > 80

Not shown: 53 genomes with orthologs for CSW01_11705 only; 3 genomes with orthologs for CSW01_09515 only