Conservation of cofitness between CSW01_17160 and CSW01_09115 in Vibrio cholerae E7946 ATCC 55056

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_17160 TetR/AcrR family transcriptional regulator 1.0 CSW01_09115 sigma-54-dependent Fis family transcriptional regulator 0.66 15
Shewanella loihica PV-4 0.43 Shew_2729 TetR family transcriptional regulator (RefSeq) 0.48 Shew_3573 Fis family GAF modulated sigma54 specific transcriptional regulator (RefSeq) — —
Shewanella sp. ANA-3 0.42 Shewana3_2864 TetR family transcriptional regulator (RefSeq) 0.49 Shewana3_0251 Fis family GAF modulated sigma54 specific transcriptional regulator (RefSeq) low > 73
Shewanella oneidensis MR-1 0.39 SO1578 transcriptional regulator, TetR family (NCBI ptt file) 0.48 SO4479 sigma-54 dependent transcriptional regulator (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.37 Sama_1089 TetR family transcriptional regulator (RefSeq) 0.42 Sama_3434 sigma-54 dependent transcriptional regulator (RefSeq) low > 62
Paraburkholderia bryophila 376MFSha3.1 0.24 H281DRAFT_05030 transcriptional regulator, TetR family 0.28 H281DRAFT_00325 GAF modulated sigma54 specific transcriptional regulator, Fis family — —
Pseudomonas fluorescens FW300-N2E3 0.22 AO353_22630 TetR family transcriptional regulator 0.25 AO353_06555 Fis family transcriptional regulator low > 101
Burkholderia phytofirmans PsJN 0.22 BPHYT_RS35800 TetR family transcriptional regulator 0.28 BPHYT_RS28085 Fis family transcriptional regulator low > 109
Xanthobacter sp. DMC5 0.21 GFF1188 HTH-type transcriptional repressor ComR 0.26 GFF2065 Acetoin catabolism regulatory protein — —
Paraburkholderia graminis OAS925 0.21 ABIE53_004482 TetR/AcrR family transcriptional repressor of nem operon 0.28 ABIE53_004383 transcriptional regulator of acetoin/glycerol metabolism low > 113
Variovorax sp. OAS795 0.20 ABID97_RS27540 TetR/AcrR family transcriptional regulator 0.28 ABID97_RS15005 sigma-54-dependent Fis family transcriptional regulator — —
Dinoroseobacter shibae DFL-12 0.20 Dshi_1874 transcriptional regulator, TetR family (RefSeq) 0.14 Dshi_4156 GAF modulated sigma54 specific transcriptional regulator, Fis family (RefSeq) 0.33 9
Azospirillum sp. SherDot2 0.19 MPMX19_03586 HTH-type transcriptional repressor ComR 0.24 MPMX19_01661 Acetoin catabolism regulatory protein low > 112
Rhodopseudomonas palustris CGA009 0.19 TX73_015645 TetR/AcrR family transcriptional regulator 0.25 TX73_006200 sigma-54-dependent Fis family transcriptional regulator low > 86
Pseudomonas sp. RS175 0.18 PFR28_02070 HTH-type transcriptional repressor ComR 0.31 PFR28_02793 Acetoin catabolism regulatory protein low > 88
Sinorhizobium meliloti 1021 0.18 SMa2381 hypothetical protein 0.23 SM_b20102 acetoin catabolism regulatory protein low > 103
Paraburkholderia sabiae LMG 24235 0.18 QEN71_RS10950 TetR/AcrR family transcriptional regulator 0.30 QEN71_RS34130 sigma-54-dependent Fis family transcriptional regulator low > 153
Pantoea sp. MT58 0.18 IAI47_19875 TetR/AcrR family transcriptional regulator 0.20 IAI47_19790 sigma-54-dependent Fis family transcriptional regulator low > 76
Pseudomonas syringae pv. syringae B728a ΔmexB 0.16 Psyr_2927 transcriptional regulator, TetR family 0.32 Psyr_1736 Helix-turn-helix, Fis-type low > 86
Pseudomonas syringae pv. syringae B728a 0.16 Psyr_2927 transcriptional regulator, TetR family 0.32 Psyr_1736 Helix-turn-helix, Fis-type low > 86
Pseudomonas lactucae CFBP13502 0.16 GEMAOFIL_04044 HTH-type transcriptional repressor ComR 0.32 GEMAOFIL_03531 Acetoin catabolism regulatory protein low > 96
Pseudomonas orientalis W4I3 0.16 QF045_RS20350 TetR/AcrR family transcriptional regulator 0.32 QF045_RS17960 sigma-54-dependent Fis family transcriptional regulator low > 93
Pseudomonas aeruginosa PUPa3 0.16 DQ20_RS33260 TetR/AcrR family transcriptional regulator 0.26 DQ20_RS48080 eatR;inference=COORDINATES sigma-54-dependent transcriptional regulator EatR low > 101
Pseudomonas aeruginosa MRSN321 0.16 DY961_RS02330 TetR/AcrR family transcriptional regulator 0.26 DY961_RS12750 eatR;inference=COORDINATES sigma-54-dependent transcriptional regulator EatR low > 100
Pseudomonas aeruginosa PA14 0.16 IKLFDK_14890 TetR family transcriptional regulator 0.26 IKLFDK_20735 sigma-54-dependent transcriptional regulator EatR low > 98
Pseudomonas simiae WCS417 0.15 PS417_19005 TetR family transcriptional regulator 0.31 PS417_16245 Fis family transcriptional regulator — —

Not shown: 18 genomes with orthologs for CSW01_17160 only; 33 genomes with orthologs for CSW01_09115 only