| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_13225 | | phosphoribulokinase | 1.0 | CSW01_08445 | | ABC transporter substrate-binding protein | 0.78 | 10 |
| Erwinia tracheiphila SCR3 | 0.76 | LU632_RS22790 | | phosphoribulokinase | 0.38 | LU632_RS11570 | sapA | peptide ABC transporter substrate-binding protein SapA | low | > 73 |
| Klebsiella michiganensis M5al | 0.76 | BWI76_RS25975 | | phosphoribulokinase | 0.40 | BWI76_RS12420 | | peptide ABC transporter substrate-binding protein SapA | low | > 92 |
| Serratia liquefaciens MT49 | 0.76 | IAI46_23570 | | phosphoribulokinase | 0.40 | IAI46_13525 | | peptide ABC transporter substrate-binding protein SapA | — | — |
| Erwinia tracheiphila HP pepo 2.2 | 0.76 | IJEDHG_12125 | | phosphoribulokinase | 0.38 | IJEDHG_23005 | sapA | peptide ABC transporter substrate-binding protein SapA | low | > 61 |
| Escherichia coli ECOR27 | 0.76 | NOLOHH_09050 | prkB | phosphoribulokinase | 0.39 | NOLOHH_20145 | sapA | peptide ABC transporter substrate-binding protein SapA | — | — |
| Escherichia coli Nissle 1917 | 0.76 | ECOLIN_RS19215 | | phosphoribulokinase | 0.39 | ECOLIN_RS07825 | | ABC transporter substrate-binding protein SapA | — | — |
| Klebsiella pneumoniae MKP103 | 0.75 | KDGMDA_06810 | | phosphoribulokinase | 0.40 | KDGMDA_19885 | | peptide ABC transporter substrate-binding protein SapA | low | > 95 |
| Rahnella sp. WP5 | 0.75 | EX31_RS04610 | | phosphoribulokinase | 0.41 | EX31_RS15700 | | peptide ABC transporter substrate-binding protein SapA | — | — |
| Escherichia coli BW25113 | 0.75 | b3355 | prkB | predicted phosphoribulokinase (NCBI) | 0.39 | b1294 | sapA | predicted antimicrobial peptide transporter subunit (NCBI) | low | > 76 |
| Escherichia coli BL21 | 0.75 | ECD_03206 | | putative phosphoribulokinase | 0.39 | ECD_01271 | | antimicrobial peptide transport ABC transporter periplasmic binding protein | — | — |
| Escherichia coli ECOR38 | 0.75 | HEPCGN_16075 | prkB | phosphoribulokinase | 0.39 | HEPCGN_25740 | sapA | peptide ABC transporter substrate-binding protein SapA | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.75 | OHPLBJKB_00347 | | Phosphoribulokinase, plasmid | 0.39 | OHPLBJKB_02388 | | Peptide transport periplasmic protein SapA | low | > 74 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.75 | GFF3714 | | Phosphoribulokinase (EC 2.7.1.19) homolog, function unknown | 0.38 | GFF2688 | | Peptide transport periplasmic protein SapA | low | > 78 |
| Escherichia coli ECRC62 | 0.75 | BNILDI_02470 | prkB | phosphoribulokinase | 0.39 | BNILDI_18295 | sapA | peptide ABC transporter substrate-binding protein SapA | low | > 75 |
| Escherichia fergusonii Becca | 0.75 | EFB2_00467 | | Phosphoribulokinase, plasmid | 0.39 | EFB2_02626 | | Peptide transport periplasmic protein SapA | low | > 86 |
| Escherichia coli ECRC100 | 0.75 | OKFHMN_17250 | prkB | phosphoribulokinase | 0.39 | OKFHMN_02460 | sapA | peptide ABC transporter substrate-binding protein SapA | — | — |
| Escherichia coli ECRC101 | 0.75 | MCAODC_07780 | prkB | phosphoribulokinase | 0.39 | MCAODC_15810 | sapA | peptide ABC transporter substrate-binding protein SapA | — | — |
| Escherichia coli ECRC102 | 0.75 | NIAGMN_15020 | prkB | phosphoribulokinase | 0.39 | NIAGMN_26630 | sapA | peptide ABC transporter substrate-binding protein SapA | — | — |
| Escherichia coli ECRC98 | 0.75 | JDDGAC_20880 | prkB | phosphoribulokinase | 0.39 | JDDGAC_05005 | sapA | peptide ABC transporter substrate-binding protein SapA | — | — |
| Escherichia coli ECRC99 | 0.75 | KEDOAH_10890 | prkB | phosphoribulokinase | 0.39 | KEDOAH_26315 | sapA | peptide ABC transporter substrate-binding protein SapA | — | — |
| Pantoea sp. MT58 | 0.75 | IAI47_01975 | | phosphoribulokinase | 0.40 | IAI47_09380 | | peptide ABC transporter substrate-binding protein SapA | low | > 76 |
| Pantoea agglomerans CFBP13505 P0401 | 0.75 | PagCFBP13505_RS21605 | | phosphoribulokinase | 0.39 | PagCFBP13505_RS06770 | | peptide ABC transporter substrate-binding protein SapA | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.74 | HER17_RS01925 | | phosphoribulokinase | 0.40 | HER17_RS09495 | | peptide ABC transporter substrate-binding protein SapA | low | > 75 |
| Dickeya dianthicola 67-19 | 0.74 | HGI48_RS19555 | | phosphoribulokinase | 0.39 | HGI48_RS12505 | | peptide ABC transporter substrate-binding protein SapA | low | > 71 |
| Enterobacter sp. TBS_079 | 0.74 | MPMX20_04258 | | Phosphoribulokinase, plasmid | 0.40 | MPMX20_02474 | | Peptide transport periplasmic protein SapA | low | > 85 |
| Dickeya dadantii 3937 | 0.74 | DDA3937_RS19435 | | phosphoribulokinase | 0.39 | DDA3937_RS12440 | | peptide ABC transporter substrate-binding protein SapA | low | > 74 |
| Dickeya dianthicola ME23 | 0.74 | DZA65_RS20640 | | phosphoribulokinase | 0.39 | DZA65_RS12955 | | peptide ABC transporter substrate-binding protein SapA | low | > 75 |
| Enterobacter asburiae PDN3 | 0.74 | EX28DRAFT_4174 | | Phosphoribulokinase | 0.41 | EX28DRAFT_0974 | | ABC-type oligopeptide transport system, periplasmic component | low | > 76 |
| Erwinia amylovora T8 | 0.74 | OLJFJH_04010 | | phosphoribulokinase | 0.39 | OLJFJH_13660 | | peptide ABC transporter substrate-binding protein SapA | low | > 58 |
| Shewanella sp. ANA-3 | 0.71 | Shewana3_3400 | | phosphoribulokinase/uridine kinase (RefSeq) | 0.37 | Shewana3_2650 | | acetate kinase (RefSeq) | — | — |
| Alteromonas macleodii MIT1002 | 0.70 | MIT1002_03965 | | Phosphoribulokinase, plasmid | 0.35 | MIT1002_01141 | | Dipeptide-binding protein | low | > 70 |
| Shewanella oneidensis MR-1 | 0.70 | SO0878 | prkB | phosphoribulokinase (NCBI ptt file) | 0.36 | SO1805 | sapA | peptide ABC transporter, periplasmic peptide-binding protein (NCBI ptt file) | low | > 76 |
| Shewanella loihica PV-4 | 0.70 | Shew_0587 | | phosphoribulokinase (RefSeq) | 0.37 | Shew_2498 | | extracellular solute-binding protein (RefSeq) | low | > 60 |
| Shewanella amazonensis SB2B | 0.68 | Sama_3002 | | phosphoribulokinase (RefSeq) | 0.36 | Sama_1235 | | peptide ABC transporter, periplasmic peptide-binding protein (RefSeq) | low | > 62 |
| Variovorax sp. OAS795 | 0.59 | ABID97_RS12880 | | phosphoribulokinase | 0.30 | ABID97_RS04470 | | ABC transporter substrate-binding protein | low | > 91 |
| Azospirillum sp. SherDot2 | 0.57 | MPMX19_02943 | | Phosphoribulokinase, chromosomal | 0.32 | MPMX19_04419 | | Periplasmic dipeptide transport protein | low | > 112 |
| Rhodospirillum rubrum S1H | 0.56 | Rru_A2404 | | Phosphoribulokinase (NCBI) | 0.30 | Rru_A2356 | | extracellular solute-binding protein, family 5 (NCBI) | low | > 58 |
| Paraburkholderia sabiae LMG 24235 | 0.56 | QEN71_RS34120 | | phosphoribulokinase | 0.31 | QEN71_RS28705 | | ABC transporter substrate-binding protein | low | > 153 |
| Rhodopseudomonas palustris CGA009 | 0.56 | TX73_024115 | | phosphoribulokinase | 0.11 | TX73_012035 | | ABC transporter substrate-binding protein | — | — |
| Paraburkholderia graminis OAS925 | 0.54 | ABIE53_005500 | | phosphoribulokinase | 0.30 | ABIE53_000595 | | dipeptide transport system substrate-binding protein | low | > 113 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.53 | H281DRAFT_01313 | | phosphoribulokinase | 0.31 | H281DRAFT_05802 | | dipeptide transport system substrate-binding protein | low | > 103 |
| Sinorhizobium meliloti 1021 | 0.52 | SM_b20201 | | phosphoribulokinase | 0.32 | SMc00786 | | periplasmic dipeptide-binding protein | low | > 103 |
Not shown: 5 genomes with orthologs for CSW01_13225 only; 35 genomes with orthologs for CSW01_08445 only