Conservation of cofitness between CSW01_15345 and CSW01_07835 in Vibrio cholerae E7946 ATCC 55056

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_15345 XRE family transcriptional regulator 1.0 CSW01_07835 catalase-peroxidase 0.76 11
Dinoroseobacter shibae DFL-12 0.59 Dshi_1555 transcriptional regulator, XRE family (RefSeq) 0.66 Dshi_3801 catalase/peroxidase HPI (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.55 PGA1_c14960 putative transcriptional regulator 0.72 PGA1_78p00050 peroxidase/catalase HPI low > 62
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS14815 XRE family transcriptional regulator 0.59 QEN71_RS29740 catalase/peroxidase HPI low > 153
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS33425 transcriptional regulator 0.60 BPHYT_RS10310 catalase-peroxidase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.44 H281DRAFT_03868 transcriptional regulator, XRE family with cupin sensor 0.57 H281DRAFT_00053 catalase-peroxidase low > 103
Azospirillum sp. SherDot2 0.38 MPMX19_05211 hypothetical protein 0.58 MPMX19_03084 Catalase-peroxidase low > 112
Sphingomonas koreensis DSMZ 15582 0.31 Ga0059261_1659 transcriptional regulator, XRE family with cupin sensor 0.57 Ga0059261_3628 catalase/peroxidase HPI low > 68
Lysobacter sp. OAE881 0.31 ABIE51_RS15090 XRE family transcriptional regulator 0.60 ABIE51_RS07780 catalase/peroxidase HPI low > 62
Ralstonia sp. UNC404CL21Col 0.30 ABZR87_RS23125 XRE family transcriptional regulator 0.57 ABZR87_RS01240 catalase/peroxidase HPI low > 80
Ralstonia solanacearum IBSBF1503 0.30 RALBFv3_RS16215 XRE family transcriptional regulator 0.61 RALBFv3_RS13105 catalase/peroxidase HPI low > 76
Ralstonia solanacearum UW163 0.30 UW163_RS16950 XRE family transcriptional regulator 0.61 UW163_RS00460 catalase/peroxidase HPI — —
Ralstonia solanacearum PSI07 0.29 RPSI07_RS07485 XRE family transcriptional regulator 0.62 RPSI07_RS20110 catalase/peroxidase HPI low > 81
Pseudomonas putida KT2440 0.22 PP_2245 Transcriptional regulator, Cro/CI family 0.59 PP_3668 Catalase-peroxidase low > 96
Pseudomonas sp. BP01 0.22 JOY50_RS25405 helix-turn-helix domain-containing protein 0.58 JOY50_RS07970 katG catalase/peroxidase HPI low > 84
Pseudomonas sp. SVBP6 0.21 COO64_RS09605 helix-turn-helix domain-containing protein 0.60 COO64_RS08175 katG catalase/peroxidase HPI 0.33 37
Pseudomonas fluorescens FW300-N2E2 0.18 Pf6N2E2_3201 Transcriptional regulator, MerR family 0.60 Pf6N2E2_3430 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 103
Pseudomonas fluorescens FW300-N2C3 0.18 AO356_06745 DNA-binding protein 0.60 AO356_07735 hydroperoxidase low > 104
Enterobacter asburiae PDN3 0.15 EX28DRAFT_1500 Predicted transcriptional regulators 0.57 EX28DRAFT_4414 catalase/peroxidase HPI low > 76
Klebsiella michiganensis M5al 0.14 BWI76_RS10700 XRE family transcriptional regulator 0.55 BWI76_RS13925 catalase/peroxidase HPI low > 92
Klebsiella pneumoniae MKP103 0.14 KDGMDA_18340 HTH-type transcriptional regulator PuuR 0.56 KDGMDA_22580 Catalase-peroxidase low > 95
Shewanella sp. ANA-3 0.14 Shewana3_3100 XRE family transcriptional regulator (RefSeq) 0.77 Shewana3_0306 catalase/peroxidase HPI (RefSeq) low > 73
Escherichia coli ECRC99 0.14 KEDOAH_26340 puuR HTH-type transcriptional regulator PuuR 0.57 KEDOAH_14500 katG catalase/peroxidase HPI — —
Escherichia coli ECRC100 0.14 OKFHMN_02435 puuR HTH-type transcriptional regulator PuuR 0.57 OKFHMN_13660 katG catalase/peroxidase HPI low > 79
Escherichia coli BL21 0.14 ECD_01276 repressor for the divergent puu operons, putrescine inducible 0.57 ECD_03828 catalase-peroxidase HPI, heme b-containing low > 61
Escherichia coli ECRC102 0.14 NIAGMN_26605 puuR HTH-type transcriptional regulator PuuR 0.57 NIAGMN_11415 katG catalase/peroxidase HPI low > 80
Escherichia coli ECRC62 0.14 BNILDI_18270 puuR HTH-type transcriptional regulator PuuR 0.57 BNILDI_05730 katG catalase/peroxidase HPI low > 75
Escherichia coli ECRC101 0.14 MCAODC_15835 puuR HTH-type transcriptional regulator PuuR 0.57 MCAODC_04160 katG catalase/peroxidase HPI low > 87
Escherichia coli ECRC98 0.14 JDDGAC_04980 puuR HTH-type transcriptional regulator PuuR 0.57 JDDGAC_17285 katG catalase/peroxidase HPI low > 87
Escherichia coli ECOR27 0.14 NOLOHH_20120 puuR HTH-type transcriptional regulator PuuR 0.57 NOLOHH_05805 katG catalase/peroxidase HPI low > 76
Escherichia coli ECOR38 0.14 HEPCGN_25765 puuR HTH-type transcriptional regulator PuuR 0.57 HEPCGN_12305 katG catalase/peroxidase HPI low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.14 OHPLBJKB_02383 HTH-type transcriptional regulator PuuR 0.57 OHPLBJKB_04108 Catalase-peroxidase low > 74
Escherichia coli BW25113 0.14 b1299 puuR DNA-binding transcriptional repressor (NCBI) 0.57 b3942 katG catalase/hydroperoxidase HPI(I) (NCBI) low > 76
Echinicola vietnamensis KMM 6221, DSM 17526 0.13 Echvi_4557 Predicted transcriptional regulators 0.60 Echvi_1165 catalase/peroxidase HPI low > 79
Shewanella oneidensis MR-1 0.13 SO1265 transcriptional regulator, putative (NCBI ptt file) 0.78 SO4405 katG-2 catalase/peroxidase HPI (NCBI ptt file) low > 76
Bosea sp. OAE506 0.12 ABIE41_RS05345 cupin domain-containing protein 0.76 ABIE41_RS01200 catalase/peroxidase HPI low > 77

Not shown: 25 genomes with orthologs for CSW01_15345 only; 51 genomes with orthologs for CSW01_07835 only