Conservation of cofitness between CSW01_17075 and CSW01_07550 in Vibrio cholerae E7946 ATCC 55056

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_17075 stress response translation initiation inhibitor YciH 1.0 CSW01_07550 GntR family transcriptional regulator 0.46 2
Alteromonas macleodii MIT1002 0.64 MIT1002_01318 translation initiation factor Sui1 0.35 MIT1002_02299 hypothetical protein low > 70
Shewanella sp. ANA-3 0.63 Shewana3_1201 translation initiation factor Sui1 (RefSeq) 0.50 Shewana3_1623 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.63 SO3345 translation initiation factor, putative (NCBI ptt file) 0.49 SO1868 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.62 Sama_2471 translation initiation factor Sui1 (RefSeq) 0.51 Sama_1966 hypothetical protein (RefSeq) low > 62
Shewanella loihica PV-4 0.60 Shew_1145 translation initiation factor Sui1 (RefSeq) 0.50 Shew_1618 hypothetical protein (RefSeq) low > 60
Pseudomonas sp. S08-1 0.47 OH686_07550 Translation initiation factor SUI1-related protein 0.50 OH686_05385 hypothetical protein low > 80
Pseudomonas segetis P6 0.46 MPMX49_04096 putative protein YciH 0.50 MPMX49_03244 Conserved virulence factor B low > 75
Pseudomonas sp. DMC3 0.44 GFF3321 putative protein YciH 0.51 GFF2362 Conserved virulence factor B 0.53 51
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_44 Translation initiation factor SUI1-related protein 0.50 PfGW456L13_4444 FIG00953341: hypothetical protein low > 87
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS03075 translation initiation factor Sui1 0.51 PFLU_RS22165 GntR family transcriptional regulator low > 109
Pseudomonas lactucae CFBP13502 0.43 GEMAOFIL_00832 putative protein YciH 0.51 GEMAOFIL_04239 Conserved virulence factor B — —
Pseudomonas fluorescens SBW25 0.43 PFLU_RS03075 translation initiation factor Sui1 0.51 PFLU_RS22165 GntR family transcriptional regulator low > 109
Pseudomonas sp. RS175 0.43 PFR28_05227 putative protein YciH 0.50 PFR28_00770 Conserved virulence factor B low > 88
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_08160 translation initiation factor Sui1 0.51 AO356_04130 GntR family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E2 0.43 Pf6N2E2_3505 Translation initiation factor SUI1-related protein 0.51 Pf6N2E2_2663 FIG00953341: hypothetical protein low > 103
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_1297 Translation initiation factor SUI1-related protein 0.52 Pf1N1B4_535 FIG00953341: hypothetical protein — —
Pseudomonas simiae WCS417 0.43 PS417_03000 translation initiation factor Sui1 0.50 PS417_20225 GntR family transcriptional regulator low > 88
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_13715 translation initiation factor Sui1 0.51 AO353_18370 GntR family transcriptional regulator low > 101
Pseudomonas stutzeri RCH2 0.43 Psest_3367 translation initation factor SUI1, putative, prokaryotic 0.48 Psest_2913 Uncharacterized protein conserved in bacteria low > 67
Pseudomonas aeruginosa PA14 0.42 IKLFDK_29365 translation initiation factor Sui1 0.50 IKLFDK_05150 GntR family transcriptional regulator low > 98
Pseudomonas sp. BP01 0.42 JOY50_RS23165 translation initiation factor Sui1 0.47 JOY50_RS01385 S1 RNA-binding domain-containing protein low > 84
Pseudomonas putida KT2440 0.42 PP_0566 translation-related factor 0.47 PP_4563 conserved protein of unknown function low > 96
Pseudomonas aeruginosa MRSN321 0.42 DY961_RS09975 translation initiation factor Sui1 0.50 DY961_RS06855 S1 RNA-binding domain-containing protein low > 100
Pseudomonas orientalis W4I3 0.42 QF045_RS06035 translation initiation factor Sui1 0.50 QF045_RS22335 S1-like domain-containing RNA-binding protein — —
Pseudomonas aeruginosa PUPa3 0.42 DQ20_RS52075 translation initiation factor Sui1 0.50 DQ20_RS45975 S1 RNA-binding domain-containing protein low > 101
Pseudomonas sp. SVBP6 0.41 COO64_RS18400 translation initiation factor Sui1 0.48 COO64_RS22130 S1 RNA-binding domain-containing protein low > 93
Pseudomonas syringae pv. syringae B728a 0.41 Psyr_4380 translation initiation factor 1 (eIF-1/SUI1) 0.51 Psyr_3786 RNA binding S1 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.41 Psyr_4380 translation initiation factor 1 (eIF-1/SUI1) 0.51 Psyr_3786 RNA binding S1 low > 86
Pedobacter sp. GW460-11-11-14-LB5 0.37 CA265_RS22355 translation initiation factor 0.35 CA265_RS12700 RNA-binding protein low > 88
Pontibacter actiniarum KMM 6156, DSM 19842 0.34 CA264_03785 translation initiation factor 0.42 CA264_13675 GntR family transcriptional regulator low > 74

Not shown: 38 genomes with orthologs for CSW01_17075 only; 9 genomes with orthologs for CSW01_07550 only