Conservation of cofitness between CSW01_01035 and CSW01_07480 in Vibrio cholerae E7946 ATCC 55056

62 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01035 gamma-glutamyltransferase 1.0 CSW01_07480 ribosomal RNA large subunit methyltransferase K/L 0.53 18
Alteromonas macleodii MIT1002 0.42 MIT1002_02259 Gamma-glutamyltranspeptidase precursor 0.44 MIT1002_02036 Ribosomal RNA large subunit methyltransferase K/L low > 70
Pseudomonas sp. RS175 0.40 PFR28_03672 Glutathione hydrolase proenzyme 0.41 PFR28_01055 Ribosomal RNA large subunit methyltransferase K/L low > 88
Pseudomonas putida KT2440 0.39 PP_3535 putative gamma-glutamyltransferase 0.42 PP_2096 fused 23S rRNA m2G2445 methyltransferase and 23S rRNA m7G2069 methyltransferase low > 96
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_2898 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.41 Pf1N1B4_3844 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) low > 87
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_1563 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.41 PfGW456L13_4094 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) low > 87
Pseudomonas sp. BP01 0.39 JOY50_RS27455 ggt gamma-glutamyltransferase 0.42 JOY50_RS22095 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 84
Pseudomonas sp. DMC3 0.39 GFF4505 Glutathione hydrolase proenzyme 0.42 GFF5254 Ribosomal RNA large subunit methyltransferase K/L low > 89
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_14670 gamma-glutamyltransferase 0.41 AO353_00775 50S rRNA methyltransferase low > 101
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_16305 gamma-glutamyltransferase 0.39 AO356_02605 50S rRNA methyltransferase low > 104
Pseudomonas simiae WCS417 0.38 PS417_03410 gamma-glutamyltransferase 0.41 PS417_20930 50S rRNA methyltransferase low > 88
Pseudomonas fluorescens SBW25 0.37 PFLU_RS03510 gamma-glutamyltransferase 0.41 PFLU_RS22545 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 109
Pseudomonas lactucae CFBP13502 0.37 GEMAOFIL_00899 Glutathione hydrolase proenzyme 0.42 GEMAOFIL_04331 Ribosomal RNA large subunit methyltransferase K/L low > 93
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS03510 gamma-glutamyltransferase 0.41 PFLU_RS22545 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 109
Acinetobacter baumannii LAC-4 0.31 RR41_RS14735 gamma-glutamyltransferase 0.36 RR41_RS10075 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 55
Shewanella loihica PV-4 0.27 Shew_2158 gamma-glutamyltransferase (RefSeq) 0.50 Shew_1812 23S rRNA m(2)G2445 methyltransferase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.26 SO1952 ggt-2 gamma-glutamyltranspeptidase (NCBI ptt file) 0.49 SO1851 conserved hypothetical protein (NCBI ptt file) low > 76
Escherichia coli Nissle 1917 0.26 ECOLIN_RS19715 gamma-glutamyltransferase 0.57 ECOLIN_RS04980 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 55
Klebsiella michiganensis M5al 0.26 BWI76_RS26275 gamma-glutamyltransferase 0.55 BWI76_RS09925 23S rRNA (guanine(2445)-N(2))/(guanine(2069)-N(7))- methyltransferase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.26 GFF561 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.56 GFF3239 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) low > 78
Escherichia fergusonii Becca 0.26 EFB2_00375 Glutathione hydrolase proenzyme 0.57 EFB2_03123 Ribosomal RNA large subunit methyltransferase K/L low > 86
Escherichia coli ECOR27 0.26 NOLOHH_08590 ggt gamma-glutamyltransferase 0.57 NOLOHH_21835 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 76
Escherichia coli ECRC62 0.26 BNILDI_02915 ggt gamma-glutamyltransferase 0.57 BNILDI_20000 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.26 OHPLBJKB_00256 Glutathione hydrolase proenzyme 0.57 OHPLBJKB_02718 Ribosomal RNA large subunit methyltransferase K/L low > 74
Enterobacter asburiae PDN3 0.26 EX28DRAFT_4279 gamma-glutamyltranspeptidase 0.55 EX28DRAFT_1995 Predicted N6-adenine-specific DNA methylase low > 76
Escherichia coli BW25113 0.26 b3447 ggt gamma-glutamyltranspeptidase periplasmic precursor (NCBI) 0.57 b0948 ycbY predicted methyltransferase (NCBI) low > 76
Escherichia coli BL21 0.26 ECD_03296 gamma-glutamyltranspeptidase 0.57 ECD_00952 23S rRNA m(2)G2445 and m(7)G2069 methyltransferases, SAM-dependent low > 61
Escherichia coli ECRC100 0.26 OKFHMN_16800 ggt gamma-glutamyltransferase 0.57 OKFHMN_05280 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 79
Escherichia coli ECRC98 0.26 JDDGAC_20430 ggt gamma-glutamyltransferase 0.57 JDDGAC_08890 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 87
Escherichia coli ECOR38 0.26 HEPCGN_15620 ggt gamma-glutamyltransferase 0.57 HEPCGN_23240 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 88
Escherichia coli ECRC99 0.26 KEDOAH_11340 ggt gamma-glutamyltransferase 0.57 KEDOAH_22455 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL — —
Escherichia coli ECRC102 0.26 NIAGMN_14570 ggt gamma-glutamyltransferase 0.57 NIAGMN_03000 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 80
Klebsiella pneumoniae MKP103 0.25 KDGMDA_07150 gamma-glutamyltransferase 0.55 KDGMDA_18160 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 95
Escherichia coli ECRC101 0.25 MCAODC_07330 ggt gamma-glutamyltransferase 0.57 MCAODC_24670 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 88
Marinobacter adhaerens HP15 0.25 HP15_1357 gamma-glutamyltranspeptidase periplasmic precursor 0.38 HP15_1379 RNA methylase low > 73
Enterobacter sp. TBS_079 0.25 MPMX20_04323 Glutathione hydrolase proenzyme 0.56 MPMX20_01599 Ribosomal RNA large subunit methyltransferase K/L low > 85
Pantoea sp. MT58 0.25 IAI47_01620 gamma-glutamyltransferase 0.57 IAI47_12690 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 76
Shewanella amazonensis SB2B 0.25 Sama_1566 gamma-glutamyltransferase (RefSeq) 0.50 Sama_1600 rlmL 23S rRNA m(2)G2445 methyltransferase (RefSeq) low > 62
Shewanella sp. ANA-3 0.25 Shewana3_2487 gamma-glutamyltransferase 1 (RefSeq) 0.49 Shewana3_1601 rlmL 23S rRNA m(2)G2445 methyltransferase (RefSeq) low > 73
Pantoea agglomerans CFBP13505 P0401 0.25 PagCFBP13505_RS18135 gamma-glutamyltransferase 0.57 PagCFBP13505_RS04640 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 74
Erwinia amylovora T8 0.25 OLJFJH_04300 gamma-glutamyltransferase 0.55 OLJFJH_15975 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 58
Erwinia tracheiphila HP pepo 2.2 0.24 IJEDHG_08020 ggt gamma-glutamyltransferase 0.53 IJEDHG_20480 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 61
Erwinia tracheiphila SCR3 0.24 LU632_RS19180 ggt gamma-glutamyltransferase 0.54 LU632_RS09965 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 74
Rahnella sp. WP5 0.23 EX31_RS22075 gamma-glutamyltransferase 0.55 EX31_RS18080 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 89
Serratia liquefaciens MT49 0.23 IAI46_04820 gamma-glutamyltransferase 0.56 IAI46_08820 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 86
Dickeya dadantii 3937 0.23 DDA3937_RS14030 gamma-glutamyltransferase 0.56 DDA3937_RS12840 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 74
Dickeya dianthicola 67-19 0.23 HGI48_RS14025 gamma-glutamyltransferase 0.56 HGI48_RS12910 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 71
Dickeya dianthicola ME23 0.23 DZA65_RS14700 gamma-glutamyltransferase 0.56 DZA65_RS13375 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 75
Pectobacterium carotovorum WPP14 0.22 HER17_RS00330 gamma-glutamyltransferase 0.56 HER17_RS11990 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 75
Pseudomonas syringae pv. syringae B728a 0.22 Psyr_0691 gamma-glutamyltransferase 1, Threonine peptidase, MEROPS family T03 0.42 Psyr_2108 23S rRNA m(2)G-2445 methyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.22 Psyr_0691 gamma-glutamyltransferase 1, Threonine peptidase, MEROPS family T03 0.42 Psyr_2108 23S rRNA m(2)G-2445 methyltransferase low > 86
Pseudomonas sp. SVBP6 0.22 COO64_RS02790 ggt gamma-glutamyltransferase 0.42 COO64_RS05295 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 93
Pseudomonas aeruginosa PA14 0.22 IKLFDK_06365 gamma-glutamyltransferase 0.42 IKLFDK_15510 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 100
Kangiella aquimarina DSM 16071 0.22 B158DRAFT_2377 gamma-glutamyltranspeptidase 0.38 B158DRAFT_2229 23S rRNA m(2)G-2445 methyltransferase (EC 2.1.1.52) low > 40
Pseudomonas stutzeri RCH2 0.21 Psest_1413 gamma-glutamyltranspeptidase 0.42 Psest_1949 Predicted N6-adenine-specific DNA methylase low > 67
Lysobacter sp. OAE881 0.20 ABIE51_RS15105 gamma-glutamyltransferase 0.37 ABIE51_RS14475 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 62
Rhodanobacter denitrificans FW104-10B01 0.19 LRK54_RS13360 gamma-glutamyltransferase 0.40 LRK54_RS14600 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 59
Dyella japonica UNC79MFTsu3.2 0.19 ABZR86_RS20010 gamma-glutamyltransferase 0.41 ABZR86_RS21235 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL 0.43 59
Rhodanobacter sp. FW510-T8 0.19 OKGIIK_02600 ggt gamma-glutamyltransferase 0.39 OKGIIK_03440 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 53
Rhodanobacter denitrificans MT42 0.19 LRK55_RS13100 gamma-glutamyltransferase 0.40 LRK55_RS14315 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 63
Rhodanobacter sp000427505 FW510-R12 0.19 LRK53_RS15220 gamma-glutamyltransferase 0.41 LRK53_RS14000 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 59
Xanthomonas campestris pv. campestris strain 8004 0.19 Xcc-8004.2158.1 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.38 Xcc-8004.3335.1 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) low > 74
Pseudomonas sp. S08-1 0.12 OH686_14140 gamma-glutamyltransferase 0.41 OH686_03110 23S rRNA (guanine(2445)-N(2))-methyltransferase / 23S rRNA (guanine(2069)-N(7))-methyltransferase low > 80

Not shown: 38 genomes with orthologs for CSW01_01035 only; 3 genomes with orthologs for CSW01_07480 only