Conservation of cofitness between CSW01_01035 and CSW01_07480 in Vibrio cholerae E7946 ATCC 55056

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01035 gamma-glutamyltransferase 1.0 CSW01_07480 ribosomal RNA large subunit methyltransferase K/L 0.53 18
Alteromonas macleodii MIT1002 0.42 MIT1002_02259 Gamma-glutamyltranspeptidase precursor 0.44 MIT1002_02036 Ribosomal RNA large subunit methyltransferase K/L low > 70
Pseudomonas sp. RS175 0.40 PFR28_03672 Glutathione hydrolase proenzyme 0.41 PFR28_01055 Ribosomal RNA large subunit methyltransferase K/L low > 88
Pseudomonas putida KT2440 0.39 PP_3535 putative gamma-glutamyltransferase 0.42 PP_2096 fused 23S rRNA m2G2445 methyltransferase and 23S rRNA m7G2069 methyltransferase low > 96
Pseudomonas fluorescens FW300-N1B4 0.39 Pf1N1B4_2898 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.41 Pf1N1B4_3844 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) low > 87
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_1563 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.41 PfGW456L13_4094 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) low > 87
Pseudomonas sp. BP01 0.39 JOY50_RS27455 ggt gamma-glutamyltransferase 0.42 JOY50_RS22095 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 84
Pseudomonas sp. DMC3 0.39 GFF4505 Glutathione hydrolase proenzyme 0.42 GFF5254 Ribosomal RNA large subunit methyltransferase K/L low > 89
Pseudomonas protegens RBAN4 0.39 FABNJH_26165 ggt gamma-glutamyltransferase 0.42 FABNJH_09755 rlmL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL — —
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_14670 gamma-glutamyltransferase 0.41 AO353_00775 50S rRNA methyltransferase low > 101
Pseudomonas fluorescens FW300-N2C3 0.38 AO356_16305 gamma-glutamyltransferase 0.39 AO356_02605 50S rRNA methyltransferase low > 104
Pseudomonas simiae WCS417 0.38 PS417_03410 gamma-glutamyltransferase 0.41 PS417_20930 50S rRNA methyltransferase low > 88
Pseudomonas orientalis W4I3 0.38 QF045_RS06425 gamma-glutamyltransferase 0.41 QF045_RS22735 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 93
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS03510 gamma-glutamyltransferase 0.41 PFLU_RS22545 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 109
Pseudomonas fluorescens SBW25 0.37 PFLU_RS03510 gamma-glutamyltransferase 0.41 PFLU_RS22545 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 109
Pseudomonas lactucae CFBP13502 0.37 GEMAOFIL_00899 Glutathione hydrolase proenzyme 0.42 GEMAOFIL_04331 Ribosomal RNA large subunit methyltransferase K/L low > 96
Acinetobacter baumannii LAC-4 0.31 RR41_RS14735 gamma-glutamyltransferase 0.36 RR41_RS10075 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 55
Shewanella loihica PV-4 0.27 Shew_2158 gamma-glutamyltransferase (RefSeq) 0.50 Shew_1812 23S rRNA m(2)G2445 methyltransferase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.26 SO1952 ggt-2 gamma-glutamyltranspeptidase (NCBI ptt file) 0.49 SO1851 conserved hypothetical protein (NCBI ptt file) low > 76
Escherichia coli Nissle 1917 0.26 ECOLIN_RS19715 gamma-glutamyltransferase 0.57 ECOLIN_RS04980 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 55
Klebsiella michiganensis M5al 0.26 BWI76_RS26275 gamma-glutamyltransferase 0.55 BWI76_RS09925 23S rRNA (guanine(2445)-N(2))/(guanine(2069)-N(7))- methyltransferase low > 92
Escherichia fergusonii Becca 0.26 EFB2_00375 Glutathione hydrolase proenzyme 0.57 EFB2_03123 Ribosomal RNA large subunit methyltransferase K/L low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.26 GFF561 Gamma-glutamyltranspeptidase (EC 2.3.2.2) 0.56 GFF3239 23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-) low > 78
Enterobacter asburiae PDN3 0.26 EX28DRAFT_4279 gamma-glutamyltranspeptidase 0.55 EX28DRAFT_1995 Predicted N6-adenine-specific DNA methylase low > 76
Escherichia coli ECRC62 0.26 BNILDI_02915 ggt gamma-glutamyltransferase 0.57 BNILDI_20000 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 75
Escherichia coli ECOR27 0.26 NOLOHH_08590 ggt gamma-glutamyltransferase 0.57 NOLOHH_21835 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.26 OHPLBJKB_00256 Glutathione hydrolase proenzyme 0.57 OHPLBJKB_02718 Ribosomal RNA large subunit methyltransferase K/L 0.30 51
Escherichia coli ECRC102 0.26 NIAGMN_14570 ggt gamma-glutamyltransferase 0.57 NIAGMN_03000 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 80
Escherichia coli BL21 0.26 ECD_03296 gamma-glutamyltranspeptidase 0.57 ECD_00952 23S rRNA m(2)G2445 and m(7)G2069 methyltransferases, SAM-dependent low > 61
Escherichia coli ECRC99 0.26 KEDOAH_11340 ggt gamma-glutamyltransferase 0.57 KEDOAH_22455 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL — —
Escherichia coli ECOR38 0.26 HEPCGN_15620 ggt gamma-glutamyltransferase 0.57 HEPCGN_23240 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 88
Escherichia coli BW25113 0.26 b3447 ggt gamma-glutamyltranspeptidase periplasmic precursor (NCBI) 0.57 b0948 ycbY predicted methyltransferase (NCBI) low > 76
Escherichia coli ECRC100 0.26 OKFHMN_16800 ggt gamma-glutamyltransferase 0.57 OKFHMN_05280 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 79
Escherichia coli ECRC98 0.26 JDDGAC_20430 ggt gamma-glutamyltransferase 0.57 JDDGAC_08890 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 87
Klebsiella pneumoniae MRSN742743 0.25 KFA93_RS09995 ggt;go_function=glutathione gamma-glutamyltransferase 0.55 KFA93_RS00730 rlmKL;go_function=RNA bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 82
Marinobacter adhaerens HP15 0.25 HP15_1357 gamma-glutamyltranspeptidase periplasmic precursor 0.38 HP15_1379 RNA methylase low > 73
Escherichia coli ECRC101 0.25 MCAODC_07330 ggt gamma-glutamyltransferase 0.57 MCAODC_24670 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 87
Klebsiella pneumoniae MKP103 0.25 KDGMDA_07150 gamma-glutamyltransferase 0.55 KDGMDA_18160 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 94
Shewanella amazonensis SB2B 0.25 Sama_1566 gamma-glutamyltransferase (RefSeq) 0.50 Sama_1600 rlmL 23S rRNA m(2)G2445 methyltransferase (RefSeq) low > 62
Enterobacter sp. TBS_079 0.25 MPMX20_04323 Glutathione hydrolase proenzyme 0.56 MPMX20_01599 Ribosomal RNA large subunit methyltransferase K/L low > 85
Pantoea sp. MT58 0.25 IAI47_01620 gamma-glutamyltransferase 0.57 IAI47_12690 bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 76
Shewanella sp. ANA-3 0.25 Shewana3_2487 gamma-glutamyltransferase 1 (RefSeq) 0.49 Shewana3_1601 rlmL 23S rRNA m(2)G2445 methyltransferase (RefSeq) low > 73
Pantoea agglomerans CFBP13505 P0401 0.25 PagCFBP13516_RS01620 ggt gamma-glutamyltransferase 0.57 PagCFBP13516_RS12775 rlmKL bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL low > 80

Not shown: 22 genomes with orthologs for CSW01_01035 only; 28 genomes with orthologs for CSW01_07480 only