Conservation of cofitness between CSW01_00025 and CSW01_06750 in Vibrio cholerae E7946 ATCC 55056

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00025 membrane protein insertion efficiency factor YidD 1.0 CSW01_06750 2-methylaconitate cis-trans isomerase PrpF 0.53 16
Shewanella oneidensis MR-1 0.63 SO0005 conserved hypothetical protein TIGR00278 (NCBI ptt file) 0.70 SO0342 conserved hypothetical protein (NCBI ptt file) — —
Shewanella sp. ANA-3 0.63 Shewana3_0007 hypothetical protein (RefSeq) 0.70 Shewana3_3828 methylitaconate delta2-delta3-isomerase (RefSeq) low > 73
Shewanella amazonensis SB2B 0.63 Sama_0010 hypothetical protein (RefSeq) 0.67 Sama_3297 hypothetical protein (RefSeq) low > 62
Klebsiella michiganensis M5al 0.62 BWI76_RS00040 membrane protein insertion efficiency factor YidD 0.24 BWI76_RS14180 hypothetical protein — —
Escherichia coli Nissle 1917 0.62 ECOLIN_RS21335 membrane protein insertion efficiency factor YidD 0.20 ECOLIN_RS04095 4-oxalomesaconate tautomerase — —
Escherichia coli BW25113 0.62 b4557 yidD hypothetical protein (NCBI) 0.20 b0769 ybhH hypothetical protein (NCBI) low > 76
Shewanella loihica PV-4 0.62 Shew_3867 hypothetical protein (RefSeq) 0.71 Shew_1823 putative AcnD-accessory protein PrpF (RefSeq) low > 60
Erwinia amylovora T8 0.61 OLJFJH_05180 membrane protein insertion efficiency factor YidD 0.23 OLJFJH_13345 4-oxalomesaconate tautomerase low > 58
Dickeya dadantii 3937 0.60 DDA3937_RS22560 membrane protein insertion efficiency factor YidD 0.19 DDA3937_RS07810 4-oxalomesaconate tautomerase low > 74
Alteromonas macleodii MIT1002 0.60 MIT1002_04131 Putative membrane protein insertion efficiency factor 0.68 MIT1002_03132 3-methylitaconate isomerase — —
Rahnella sp. WP5 0.57 EX31_RS25180 membrane protein insertion efficiency factor YidD 0.27 EX31_RS10210 4-oxalomesaconate tautomerase low > 89
Pseudomonas aeruginosa PA14 0.55 IKLFDK_10005 membrane protein insertion efficiency factor YidD 0.67 IKLFDK_03430 2-methylaconitate cis-trans isomerase PrpF low > 100
Kangiella aquimarina DSM 16071 0.53 B158DRAFT_0371 conserved hypothetical protein YidD 0.70 B158DRAFT_1346 2-methylaconitate cis-trans isomerase — —
Magnetospirillum magneticum AMB-1 0.51 AMB_RS22030 membrane protein insertion efficiency factor YidD 0.21 AMB_RS01270 4-oxalomesaconate tautomerase low > 64
Pseudomonas segetis P6 0.50 MPMX49_00250 Putative membrane protein insertion efficiency factor 0.70 MPMX49_02625 2-methyl-aconitate isomerase — —
Pseudomonas sp. SVBP6 0.50 COO64_RS02095 yidD membrane protein insertion efficiency factor YidD 0.72 COO64_RS09915 prpF 2-methylaconitate cis-trans isomerase PrpF low > 93
Castellaniella sp019104865 MT123 0.50 ABCV34_RS11885 membrane protein insertion efficiency factor YidD 0.21 ABCV34_RS02795 4-oxalomesaconate tautomerase low > 48
Pseudomonas fluorescens SBW25-INTG 0.48 PFLU_RS31225 membrane protein insertion efficiency factor YidD 0.71 PFLU_RS22675 2-methylaconitate cis-trans isomerase PrpF low > 109
Pseudomonas fluorescens SBW25 0.48 PFLU_RS31225 membrane protein insertion efficiency factor YidD 0.71 PFLU_RS22675 2-methylaconitate cis-trans isomerase PrpF low > 109
Pseudomonas sp. BP01 0.48 JOY50_RS08365 yidD membrane protein insertion efficiency factor YidD 0.70 JOY50_RS25735 prpF 2-methylaconitate cis-trans isomerase PrpF — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_5135 Protein of unknown function DUF37 0.70 Psyr_2088 2-methylaconitate cis-trans isomerase low > 86
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_5135 Protein of unknown function DUF37 0.70 Psyr_2088 2-methylaconitate cis-trans isomerase low > 86
Pseudomonas putida KT2440 0.47 PP_0007 conserved hypothetical protein 0.70 PP_2337 aconitate isomerase low > 96
Paraburkholderia graminis OAS925 0.45 ABIE53_000335 putative membrane protein insertion efficiency factor 0.72 ABIE53_005044 putative AcnD-accessory protein PrpF low > 113
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS29670 membrane protein insertion efficiency factor YidD 0.71 QEN71_RS31055 2-methylaconitate cis-trans isomerase PrpF low > 153
Dyella japonica UNC79MFTsu3.2 0.35 ABZR86_RS08755 membrane protein insertion efficiency factor YidD 0.72 ABZR86_RS08430 2-methylaconitate cis-trans isomerase PrpF 0.48 38

Not shown: 19 genomes with orthologs for CSW01_00025 only; 47 genomes with orthologs for CSW01_06750 only