| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_07790 | | glycerol-3-phosphate transporter permease | 1.0 | CSW01_06605 | | transcriptional regulator TyrR | 0.54 | 7 |
| Azospirillum sp. SherDot2 | 0.47 | MPMX19_00484 | | sn-glycerol-3-phosphate transport system permease protein UgpA | 0.32 | MPMX19_06098 | | Transcriptional regulatory protein TyrR | low | > 112 |
| Rahnella sp. WP5 | 0.44 | EX31_RS14755 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.53 | EX31_RS06335 | | transcriptional regulator TyrR | low | > 89 |
| Pectobacterium carotovorum WPP14 | 0.43 | HER17_RS00615 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.54 | HER17_RS09575 | | transcriptional regulator TyrR | low | > 75 |
| Erwinia amylovora T8 | 0.43 | OLJFJH_04325 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.52 | OLJFJH_13705 | | transcriptional regulator TyrR | low | > 58 |
| Pantoea sp. MT58 | 0.43 | IAI47_01595 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.52 | IAI47_09440 | | transcriptional regulator TyrR | 0.20 | 74 |
| Pantoea agglomerans CFBP13505 P0401 | 0.43 | PagCFBP13505_RS18110 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.52 | PagCFBP13505_RS06710 | | transcriptional regulator TyrR | low | > 74 |
| Serratia liquefaciens MT49 | 0.43 | IAI46_00995 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.55 | IAI46_13470 | | transcriptional regulator TyrR | low | > 87 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.42 | GFF556 | | Glycerol-3-phosphate ABC transporter, permease protein UgpA (TC 3.A.1.1.3) | 0.51 | GFF2679 | | Transcriptional repressor protein TyrR | low | > 78 |
| Enterobacter asburiae PDN3 | 0.42 | EX28DRAFT_4284 | | ABC-type sugar transport systems, permease components | 0.51 | EX28DRAFT_0994 | | Transcriptional regulator of aromatic amino acids metabolism | low | > 76 |
| Enterobacter sp. TBS_079 | 0.42 | MPMX20_04328 | | sn-glycerol-3-phosphate transport system permease protein UgpA | 0.51 | MPMX20_02454 | | Transcriptional regulatory protein TyrR | low | > 85 |
| Klebsiella michiganensis M5al | 0.42 | BWI76_RS26300 | | glycerol-3-phosphate transporter permease | 0.49 | BWI76_RS12485 | | TyrR family transcriptional regulator | low | > 92 |
| Escherichia coli ECOR27 | 0.41 | NOLOHH_08565 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.50 | NOLOHH_20000 | tyrR | transcriptional regulator TyrR | low | > 76 |
| Escherichia coli BW25113 | 0.41 | b3452 | ugpA | glycerol-3-phosphate transporter subunit (NCBI) | 0.50 | b1323 | tyrR | DNA-binding transcriptional dual regulator, tyrosine-binding (NCBI) | low | > 76 |
| Escherichia coli ECRC62 | 0.41 | BNILDI_02940 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.50 | BNILDI_18150 | tyrR | transcriptional regulator TyrR | low | > 75 |
| Escherichia coli BL21 | 0.41 | ECD_03301 | | sn-glycerol-3-phosphate ABC transporter permease | 0.50 | ECD_01300 | | aromatic amino acid biosynthesis and transport regulon transcriptional regulator; autorepressor; ATPase; phosphatase | low | > 61 |
| Escherichia coli ECOR38 | 0.41 | HEPCGN_15595 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.51 | HEPCGN_25885 | tyrR | transcriptional regulator TyrR | low | > 88 |
| Escherichia coli Nissle 1917 | 0.41 | ECOLIN_RS19740 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.51 | ECOLIN_RS07945 | | transcriptional regulator TyrR | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.41 | OHPLBJKB_00251 | | sn-glycerol-3-phosphate transport system permease protein UgpA | 0.50 | OHPLBJKB_02359 | | Transcriptional regulatory protein TyrR | low | > 74 |
| Escherichia coli ECRC101 | 0.41 | MCAODC_07305 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.51 | MCAODC_15965 | tyrR | transcriptional regulator TyrR | low | > 87 |
| Klebsiella pneumoniae MKP103 | 0.41 | KDGMDA_07175 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.50 | KDGMDA_19960 | | transcriptional regulator TyrR | low | > 95 |
| Escherichia coli ECRC102 | 0.41 | NIAGMN_14545 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.51 | NIAGMN_26475 | tyrR | transcriptional regulator TyrR | low | > 80 |
| Escherichia coli ECRC100 | 0.41 | OKFHMN_16775 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.51 | OKFHMN_02305 | tyrR | transcriptional regulator TyrR | low | > 79 |
| Escherichia coli ECRC98 | 0.41 | JDDGAC_20405 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.51 | JDDGAC_04850 | tyrR | transcriptional regulator TyrR | low | > 87 |
| Escherichia coli ECRC99 | 0.41 | KEDOAH_11365 | ugpA | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.51 | KEDOAH_26470 | tyrR | transcriptional regulator TyrR | — | — |
| Escherichia fergusonii Becca | 0.40 | EFB2_00370 | | sn-glycerol-3-phosphate transport system permease protein UgpA | 0.51 | EFB2_02604 | | Transcriptional regulatory protein TyrR | low | > 86 |
| Dickeya dadantii 3937 | 0.39 | DDA3937_RS00725 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.53 | DDA3937_RS12390 | | transcriptional regulator TyrR | low | > 74 |
| Dickeya dianthicola ME23 | 0.39 | DZA65_RS21660 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.52 | DZA65_RS12910 | | transcriptional regulator TyrR | low | > 75 |
| Dickeya dianthicola 67-19 | 0.39 | HGI48_RS20645 | | sn-glycerol-3-phosphate ABC transporter permease UgpA | 0.53 | HGI48_RS12460 | | transcriptional regulator TyrR | low | > 71 |
| Pseudomonas syringae pv. syringae B728a | 0.27 | Psyr_4503 | | carbohydrate ABC transporter membrane protein 1, CUT1 family | 0.34 | Psyr_3574 | | Helix-turn-helix, Fis-type | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.27 | Psyr_4503 | | carbohydrate ABC transporter membrane protein 1, CUT1 family | 0.34 | Psyr_3574 | | Helix-turn-helix, Fis-type | low | > 86 |
| Pseudomonas sp. BP01 | 0.16 | JOY50_RS11420 | | carbohydrate ABC transporter permease | 0.36 | JOY50_RS01020 | | sigma-54-dependent phenylalanine hydroxylase transcriptional regulator PhhR | low | > 84 |
| Pseudomonas putida KT2440 | 0.16 | PP_1016 | | mannose/glucose ABC transporter, permease protein | 0.37 | PP_4489 | | sigma-54 dependent transcriptional regulator | low | > 96 |
| Pseudomonas fluorescens GW456-L13 | 0.15 | PfGW456L13_3041 | | Various polyols ABC transporter, permease component 1 | 0.36 | PfGW456L13_4393 | | Phenylalanine hydroxylase transcriptional activator PhhR | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.15 | Pf6N2E2_809 | | Various polyols ABC transporter, permease component 1 | 0.37 | Pf6N2E2_2629 | | Phenylalanine hydroxylase transcriptional activator PhhR | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.15 | AO356_27675 | | sugar ABC transporter permease | 0.37 | AO356_03970 | | AAA family ATPase | low | > 104 |
| Pseudomonas sp. RS175 | 0.15 | PFR28_01712 | | sn-glycerol-3-phosphate transport system permease protein UgpA | 0.37 | PFR28_00803 | | Transcriptional regulatory protein TyrR | low | > 88 |
| Pseudomonas lactucae CFBP13502 | 0.15 | GEMAOFIL_02790 | | Lactose transport system permease protein LacF | 0.36 | GEMAOFIL_04177 | | Transcriptional regulatory protein TyrR | — | — |
| Pseudomonas segetis P6 | 0.15 | ACVTMO_RS14050 | | carbohydrate ABC transporter permease | 0.37 | ACVTMO_RS13970 | | sigma-54-dependent transcriptional regulator | low | > 75 |
| Pseudomonas simiae WCS417 | 0.15 | PS417_12710 | | ABC transporter for D-Mannitol and D-Sorbitol, permease component 2 (from data) | 0.37 | PS417_19895 | | ATPase AAA | low | > 88 |
| Pseudomonas fluorescens SBW25-INTG | 0.15 | PFLU_RS13400 | | sugar ABC transporter permease | 0.36 | PFLU_RS21865 | | sigma-54-dependent phenylalanine hydroxylase transcriptional regulator PhhR | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.15 | PFLU_RS13400 | | sugar ABC transporter permease | 0.36 | PFLU_RS21865 | | sigma-54-dependent phenylalanine hydroxylase transcriptional regulator PhhR | low | > 109 |
| Pseudomonas fluorescens FW300-N1B4 | 0.15 | Pf1N1B4_4849 | | Various polyols ABC transporter, permease component 1 | 0.37 | Pf1N1B4_3567 | | Phenylalanine hydroxylase transcriptional activator PhhR | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.15 | AO353_25885 | | sugar ABC transporter permease | 0.37 | AO353_18590 | | AAA family ATPase | low | > 101 |
| Pseudomonas orientalis W4I3 | 0.15 | QF045_RS17185 | | sugar ABC transporter permease | 0.37 | QF045_RS22025 | | sigma-54-dependent transcriptional regulator | low | > 93 |
| Pseudomonas sp. DMC3 | 0.15 | GFF2896 | | sn-glycerol-3-phosphate transport system permease protein UgpA | 0.37 | GFF2415 | | Transcriptional regulatory protein TyrR | low | > 89 |
| Pseudomonas stutzeri RCH2 | 0.15 | Psest_1897 | | ABC-type sugar transport systems, permease components | 0.36 | Psest_0782 | | Transcriptional regulator of aromatic amino acids metabolism | low | > 67 |
| Pseudomonas aeruginosa MRSN321 | 0.14 | DY961_RS18090 | | sugar ABC transporter permease | 0.36 | DY961_RS08115 | | sigma-54-dependent phenylalanine hydroxylase transcriptional regulator PhhR | low | > 100 |
| Pseudomonas aeruginosa PUPa3 | 0.14 | DQ20_RS59325 | | sugar ABC transporter permease | 0.35 | DQ20_RS44695 | | sigma-54-dependent phenylalanine hydroxylase transcriptional regulator PhhR | low | > 101 |
| Pseudomonas aeruginosa PA14 | 0.14 | IKLFDK_11455 | | sugar ABC transporter permease | 0.36 | IKLFDK_03870 | | AAA family ATPase | low | > 98 |
| Pseudomonas sp. S08-1 | 0.14 | OH686_02465 | | Glucose ABC transport system, inner membrane component 1 | 0.37 | OH686_21240 | | Phenylalanine hydroxylase transcriptional activator PhhR | low | > 80 |
| Pseudomonas sp. SVBP6 | 0.14 | COO64_RS04560 | | carbohydrate ABC transporter permease | 0.37 | COO64_RS21655 | | sigma-54-dependent phenylalanine hydroxylase transcriptional regulator PhhR | low | > 93 |
Not shown: 38 genomes with orthologs for CSW01_07790 only; 7 genomes with orthologs for CSW01_06605 only