Conservation of cofitness between CSW01_08745 and CSW01_06280 in Vibrio cholerae E7946 ATCC 55056

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08745 TetR/AcrR family transcriptional regulator 1.0 CSW01_06280 succinylglutamate desuccinylase 0.51 9
Shewanella loihica PV-4 0.51 Shew_2052 TetR family transcriptional regulator (RefSeq) 0.28 Shew_1924 succinylglutamate desuccinylase (RefSeq)
Shewanella oneidensis MR-1 0.50 SO2493 transcriptional regulator, TetR family (NCBI ptt file) 0.27 SO2338 astE succinylglutamate desuccinylase (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.50 Sama_1816 TetR family transcriptional regulator (RefSeq) 0.28 Sama_1708 succinylglutamate desuccinylase (RefSeq) low > 62
Shewanella sp. ANA-3 0.50 Shewana3_2155 TetR family transcriptional regulator (RefSeq) 0.27 Shewana3_2132 succinylglutamate desuccinylase (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.44 MIT1002_01970 Stress response protein YttP 0.26 MIT1002_01538 Succinylglutamate desuccinylase
Kangiella aquimarina DSM 16071 0.42 B158DRAFT_2232 transcriptional regulator, TetR family 0.26 B158DRAFT_1551 succinylglutamate desuccinylase (EC 3.5.1.96)
Pseudomonas simiae WCS417 0.36 PS417_07615 TetR family transcriptional regulator 0.23 PS417_21680 succinylglutamate desuccinylase low > 88
Pseudomonas putida KT2440 0.36 PP_2144 Transcriptional regulator, TetR family 0.24 PP_4475 succinylglutamate desuccinylase low > 96
Pseudomonas aeruginosa PA14 0.36 IKLFDK_15295 transcriptional regulator PsrA 0.25 IKLFDK_04015 succinylglutamate desuccinylase 0.37 52
Pseudomonas lactucae CFBP13502 0.36 GEMAOFIL_01655 hypothetical protein 0.23 GEMAOFIL_04479 Succinylglutamate desuccinylase low > 96
Pseudomonas aeruginosa MRSN321 0.36 DY961_RS01935 psrA;inference=COORDINATES transcriptional regulator PsrA 0.25 DY961_RS07965 astE;go_function=succinylglutamate succinylglutamate desuccinylase low > 100
Pseudomonas aeruginosa PUPa3 0.35 DQ20_RS33645 psrA;inference=COORDINATES transcriptional regulator PsrA 0.25 DQ20_RS44835 astE;go_function=succinylglutamate succinylglutamate desuccinylase low > 101
Pseudomonas sp. SVBP6 0.35 COO64_RS09435 TetR/AcrR family transcriptional regulator 0.24 COO64_RS21585 astE succinylglutamate desuccinylase low > 93
Pseudomonas sp. BP01 0.35 JOY50_RS25075 TetR/AcrR family transcriptional regulator 0.24 JOY50_RS00950 astE succinylglutamate desuccinylase low > 84
Pseudomonas sp. RS175 0.35 PFR28_01118 hypothetical protein 0.24 PFR28_03277 Succinylglutamate desuccinylase low > 88
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS07690 helix-turn-helix transcriptional regulator 0.23 PFLU_RS23285 succinylglutamate desuccinylase low > 109
Pseudomonas fluorescens FW300-N2E2 0.35 Pf6N2E2_2282 Predicted transcriptional regulator for fatty acid degradation FadQ, TetR family 0.24 Pf6N2E2_5671 Succinylglutamate desuccinylase (EC 3.5.1.96) 0.26 78
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_00460 TetR family transcriptional regulator 0.24 AO353_02995 succinylglutamate desuccinylase low > 101
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_02290 TetR family transcriptional regulator 0.24 AO356_18755 succinylglutamate desuccinylase low > 104
Pseudomonas fluorescens SBW25 0.35 PFLU_RS07690 helix-turn-helix transcriptional regulator 0.23 PFLU_RS23285 succinylglutamate desuccinylase low > 109
Pseudomonas orientalis W4I3 0.35 QF045_RS10255 TetR/AcrR family transcriptional regulator 0.23 QF045_RS23785 succinylglutamate desuccinylase low > 93
Pseudomonas fluorescens GW456-L13 0.35 PfGW456L13_4033 Predicted transcriptional regulator for fatty acid degradation FadQ, TetR family 0.24 PfGW456L13_1977 Succinylglutamate desuccinylase (EC 3.5.1.96) (from data) low > 87
Pseudomonas stutzeri RCH2 0.35 Psest_2645 Transcriptional regulator 0.18 Psest_2717 Succinylglutamate desuccinylase low > 67
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_3282 transcriptional regulator, TetR family 0.25 Psyr_3559 succinylglutamate desuccinylase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_3282 transcriptional regulator, TetR family 0.25 Psyr_3559 succinylglutamate desuccinylase low > 86
Pseudomonas sp. S08-1 0.35 OH686_21965 Predicted transcriptional regulator for fatty acid degradation FadQ, TetR family 0.24 OH686_21320 succinylglutamate desuccinylase
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_3911 Predicted transcriptional regulator for fatty acid degradation FadQ, TetR family 0.24 Pf1N1B4_3447 Succinylglutamate desuccinylase (EC 3.5.1.96) low > 87
Pseudomonas sp. DMC3 0.35 GFF1279 hypothetical protein 0.23 GFF4873 Succinylglutamate desuccinylase low > 89
Pseudomonas segetis P6 0.34 MPMX49_02987 hypothetical protein 0.25 MPMX49_03201 Succinylglutamate desuccinylase low > 75
Marinobacter adhaerens HP15 0.34 HP15_2262 transcriptional Regulator, TetR family protein 0.21 HP15_3034 succinylglutamate desuccinylase low > 73

Not shown: 17 genomes with orthologs for CSW01_08745 only; 29 genomes with orthologs for CSW01_06280 only