Conservation of cofitness between CSW01_08635 and CSW01_05680 in Vibrio cholerae E7946 ATCC 55056

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08635 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 1.0 CSW01_05680 short-chain dehydrogenase 0.40 20
Klebsiella michiganensis M5al 0.50 BWI76_RS09830 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.45 BWI76_RS12580 oxidoreductase low > 92
Klebsiella pneumoniae MRSN742743 0.50 GJGHJB_03296 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.40 GJGHJB_04415 yqjQ Oxidoreductase low > 83
Klebsiella pneumoniae MKP103 0.50 KDGMDA_18030 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.40 KDGMDA_11815 short-chain dehydrogenase low > 94
Rahnella sp. WP5 0.49 EX31_RS18180 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.44 EX31_RS23990 SDR family NAD(P)-dependent oxidoreductase low > 89
Pectobacterium carotovorum WPP14 0.49 HER17_RS12065 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.46 HER17_RS10565 SDR family NAD(P)-dependent oxidoreductase low > 75
Erwinia tracheiphila SCR3 0.47 LU632_RS09865 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.45 LU632_RS09375 SDR family NAD(P)-dependent oxidoreductase low > 73
Erwinia tracheiphila HP pepo 2.2 0.47 IJEDHG_20365 cmoM tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.45 IJEDHG_19840 short-chain dehydrogenase low > 61
Enterobacter sp. TBS_079 0.47 MPMX20_01579 tRNA 5-carboxymethoxyuridine methyltransferase 0.45 MPMX20_02174 hypothetical protein 0.25 83
Enterobacter asburiae PDN3 0.46 EX28DRAFT_2015 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 0.43 EX28DRAFT_1374 Short-chain dehydrogenases of various substrate specificities 0.49 26
Erwinia amylovora T8 0.43 OLJFJH_16080 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 0.44 OLJFJH_16585 short-chain dehydrogenase low > 58
Shewanella sp. ANA-3 0.40 Shewana3_0557 methyltransferase type 11 (RefSeq) 0.44 Shewana3_1168 short-chain dehydrogenase/reductase SDR (RefSeq) low > 73
Shewanella oneidensis MR-1 0.40 SO0558 smtA smtA protein (NCBI ptt file) 0.40 SO3382 oxidoreductase, short-chain dehydrogenase/reductase family (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.37 Sama_3149 smtA protein (RefSeq) 0.43 Sama_0813 short chain dehydrogenase/reductase family oxidoreductase (RefSeq) low > 62
Shewanella loihica PV-4 0.36 Shew_0440 methyltransferase type 12 (RefSeq) 0.44 Shew_1481 short-chain dehydrogenase/reductase SDR (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.30 MIT1002_01973 putative S-adenosyl-L-methionine-dependent methyltransferase 0.40 MIT1002_02685 Serine 3-dehydrogenase low > 70
Pseudomonas sp. S08-1 0.29 OH686_07475 tRNA uridine 5-oxyacetic acid(34) methyltransferase 0.29 OH686_07860 Oxidoreductase, short-chain dehydrogenase/reductase family low > 80
Pseudomonas simiae WCS417 0.29 PS417_03035 SAM-dependent methyltransferase 0.28 PS417_03655 short-chain dehydrogenase low > 88
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_08125 SAM-dependent methyltransferase 0.33 AO356_25330 short-chain dehydrogenase low > 104
Pseudomonas orientalis W4I3 0.28 QF045_RS06070 methyltransferase domain-containing protein 0.28 QF045_RS06635 SDR family NAD(P)-dependent oxidoreductase low > 93
Pseudomonas lactucae CFBP13502 0.28 GEMAOFIL_00839 tRNA 5-carboxymethoxyuridine methyltransferase 0.28 GEMAOFIL_00937 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase low > 96
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS03115 methyltransferase domain-containing protein 0.28 PFLU_RS03705 SDR family NAD(P)-dependent oxidoreductase low > 109
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_3497 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) 0.33 Pf6N2E2_1347 Oxidoreductase, short-chain dehydrogenase/reductase family (EC 1.1.1.-) low > 103
Pseudomonas fluorescens SBW25 0.28 PFLU_RS03115 methyltransferase domain-containing protein 0.28 PFLU_RS03705 SDR family NAD(P)-dependent oxidoreductase low > 109
Pseudomonas sp. DMC3 0.27 GFF3328 tRNA 5-carboxymethoxyuridine methyltransferase 0.27 GFF4481 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase low > 89
Pseudomonas sp. FW215-L2 0.27 GFF1716 tRNA 5-carboxymethoxyuridine methyltransferase 0.29 GFF2080 putative oxidoreductase low > 111
Pseudomonas protegens RBAN4 0.27 FABNJH_03540 ubiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benz oquinol methylase 0.30 FABNJH_25915 Oxidoreductase, short chain dehydrogenase/reductase family — —
Pseudomonas sp. RS175 0.27 PFR28_05234 tRNA 5-carboxymethoxyuridine methyltransferase 0.31 PFR28_02035 putative oxidoreductase low > 88
Pseudomonas stutzeri RCH2 0.27 Psest_3358 Methyltransferase domain. 0.31 Psest_2399 Short-chain dehydrogenases of various substrate specificities low > 67
Pseudomonas segetis P6 0.26 ACVTMO_RS19885 methyltransferase domain-containing protein 0.30 ACVTMO_RS06670 SDR family NAD(P)-dependent oxidoreductase low > 75
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_0641 smtA protein 0.29 Psyr_0959 Short-chain dehydrogenase/reductase SDR low > 86
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_0641 smtA protein 0.29 Psyr_0959 Short-chain dehydrogenase/reductase SDR low > 86
Pseudomonas sp. BP01 0.26 JOY50_RS23225 methyltransferase domain-containing protein 0.32 JOY50_RS03425 SDR family oxidoreductase low > 84
Pseudomonas putida KT2440 0.25 PP_0578 putative Methyltransferase 0.31 PP_2737 Oxidoreductase, short-chain dehydrogenase/reductase family low > 96

Not shown: 27 genomes with orthologs for CSW01_08635 only; 7 genomes with orthologs for CSW01_05680 only