Conservation of cofitness between CSW01_01445 and CSW01_04930 in Vibrio cholerae E7946 ATCC 55056

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01445 lysine decarboxylase 1.0 CSW01_04930 phosphoenolpyruvate-protein phosphotransferase PtsI 0.74 12
Escherichia fergusonii Becca 0.78 EFB2_04451 Inducible lysine decarboxylase 0.73 EFB2_01460 Phosphoenolpyruvate-protein phosphotransferase — —
Escherichia coli ECOR38 0.78 HEPCGN_11110 cadA lysine decarboxylase CadA 0.73 HEPCGN_21370 ptsI phosphoenolpyruvate-protein phosphotransferase PtsI low > 88
Escherichia coli ECRC62 0.78 BNILDI_06750 cadA lysine decarboxylase CadA 0.73 BNILDI_12735 ptsI phosphoenolpyruvate-protein phosphotransferase PtsI — —
Escherichia coli ECOR27 0.78 NOLOHH_04740 cadA lysine decarboxylase CadA 0.73 NOLOHH_13870 ptsI phosphoenolpyruvate-protein phosphotransferase PtsI — —
Escherichia coli BW25113 0.78 b4131 cadA lysine decarboxylase 1 (NCBI) 0.73 b2416 ptsI PEP-protein phosphotransferase of PTS system (enzyme I) (NCBI) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.78 OHPLBJKB_03912 Inducible lysine decarboxylase 0.73 OHPLBJKB_01307 Phosphoenolpyruvate-protein phosphotransferase — —
Escherichia coli ECRC99 0.78 KEDOAH_15690 cadA lysine decarboxylase CadA 0.73 KEDOAH_06030 ptsI phosphoenolpyruvate-protein phosphotransferase PtsI — —
Escherichia coli ECRC100 0.78 OKFHMN_12475 cadA lysine decarboxylase CadA 0.73 OKFHMN_22190 ptsI phosphoenolpyruvate-protein phosphotransferase PtsI low > 79
Escherichia coli ECRC101 0.78 MCAODC_02985 cadA lysine decarboxylase CadA 0.73 MCAODC_12720 ptsI phosphoenolpyruvate-protein phosphotransferase PtsI low > 87
Escherichia coli ECRC102 0.78 NIAGMN_10320 cadA lysine decarboxylase CadA 0.73 NIAGMN_19960 ptsI phosphoenolpyruvate-protein phosphotransferase PtsI low > 80
Escherichia coli ECRC98 0.78 JDDGAC_16110 cadA lysine decarboxylase CadA 0.73 JDDGAC_26140 ptsI phosphoenolpyruvate-protein phosphotransferase PtsI — —
Escherichia coli BL21 0.78 ECD_04002 lysine decarboxylase, acid-inducible 0.73 ECD_02316 PEP-protein phosphotransferase of PTS system (enzyme I) — —
Klebsiella pneumoniae MKP103 0.78 KDGMDA_15475 lysine decarboxylase CadA 0.73 KDGMDA_27495 phosphoenolpyruvate-protein phosphotransferase PtsI low > 95
Klebsiella michiganensis M5al 0.78 BWI76_RS07195 lysine decarboxylase CadA 0.74 BWI76_RS20650 phosphoenolpyruvate--protein phosphotransferase low > 92
Serratia liquefaciens MT49 0.77 IAI46_20145 lysine decarboxylase CadA 0.73 IAI46_18460 phosphoenolpyruvate-protein phosphotransferase PtsI low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF2452 Lysine decarboxylase, inducible (EC 4.1.1.18) 0.74 GFF2047 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) low > 78
Enterobacter asburiae PDN3 0.71 EX28DRAFT_3774 Arginine/lysine/ornithine decarboxylases 0.74 EX28DRAFT_0212 phosphoenolpyruvate-protein phosphotransferase — —
Enterobacter sp. TBS_079 0.71 MPMX20_00870 Constitutive lysine decarboxylase 0.73 MPMX20_03310 Phosphoenolpyruvate-protein phosphotransferase low > 85
Rahnella sp. WP5 0.71 EX31_RS12950 lysine decarboxylase LdcC 0.75 EX31_RS20185 phosphoenolpyruvate-protein phosphotransferase PtsI low > 89
Pantoea sp. MT58 0.70 IAI47_15445 lysine decarboxylase LdcC 0.73 IAI47_05425 phosphoenolpyruvate-protein phosphotransferase PtsI low > 76
Pantoea agglomerans CFBP13505 P0401 0.70 PagCFBP13505_RS13560 lysine decarboxylase LdcC 0.73 PagCFBP13505_RS19970 phosphoenolpyruvate-protein phosphotransferase PtsI low > 74
Erwinia amylovora T8 0.70 OLJFJH_00545 lysine decarboxylase LdcC 0.73 OLJFJH_10855 phosphoenolpyruvate-protein phosphotransferase PtsI low > 58
Ralstonia solanacearum PSI07 0.34 RPSI07_RS13045 lysine decarboxylase 0.32 RPSI07_RS22435 phosphoenolpyruvate--protein phosphotransferase — —
Cupriavidus basilensis FW507-4G11 0.34 RR42_RS15940 lysine decarboxylase 0.34 RR42_RS01795 phosphoenolpyruvate-protein phosphotransferase — —
Dechlorosoma suillum PS 0.34 Dsui_1245 arginine/lysine/ornithine decarboxylase 0.31 Dsui_0742 phosphoenolpyruvate-protein phosphotransferase — —
Ralstonia solanacearum UW163 0.34 UW163_RS09345 lysine decarboxylase 0.32 UW163_RS02705 phosphoenolpyruvate--protein phosphotransferase — —
Ralstonia solanacearum IBSBF1503 0.34 RALBFv3_RS04325 lysine decarboxylase 0.32 RALBFv3_RS10875 phosphoenolpyruvate--protein phosphotransferase — —
Ralstonia solanacearum GMI1000 0.34 RS_RS11875 lysine decarboxylase 0.32 RS_RS01715 phosphoenolpyruvate--protein phosphotransferase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.34 GFF4333 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) 0.31 GFF2931 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) low > 90
Herbaspirillum seropedicae SmR1 0.34 HSERO_RS17280 lysine decarboxylase 0.32 HSERO_RS00450 phosphoenolpyruvate-protein phosphotransferase — —
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS25000 arginine/lysine/ornithine decarboxylase 0.32 QEN71_RS01430 phosphoenolpyruvate--protein phosphotransferase — —
Ralstonia sp. UNC404CL21Col 0.34 ABZR87_RS16180 arginine/lysine/ornithine decarboxylase 0.32 ABZR87_RS06725 phosphoenolpyruvate--protein phosphotransferase low > 80
Methylophilus sp. DMC18 0.34 GFF1062 Biodegradative arginine decarboxylase 0.31 GFF2263 Phosphoenolpyruvate-protein phosphotransferase — —
Acidovorax sp. GW101-3H11 0.33 Ac3H11_2914 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) 0.30 Ac3H11_2115 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) — —
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS04980 lysine decarboxylase 0.33 BPHYT_RS02575 phosphoenolpyruvate-protein phosphotransferase — —
Paraburkholderia graminis OAS925 0.33 ABIE53_001270 arginine decarboxylase 0.32 ABIE53_000660 phosphotransferase system enzyme I (PtsI) — —
Castellaniella sp019104865 MT123 0.33 ABCV34_RS08900 arginine/lysine/ornithine decarboxylase 0.30 ABCV34_RS04780 phosphoenolpyruvate--protein phosphotransferase — —
Variovorax sp. SCN45 0.33 GFF232 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) 0.30 GFF3653 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) low > 127
Variovorax sp. OAS795 0.33 ABID97_RS16535 arginine/lysine/ornithine decarboxylase 0.30 ABID97_RS00565 phosphoenolpyruvate--protein phosphotransferase low > 91

Not shown: 22 genomes with orthologs for CSW01_01445 only; 24 genomes with orthologs for CSW01_04930 only