Conservation of cofitness between CSW01_18990 and CSW01_04590 in Vibrio cholerae E7946 ATCC 55056

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_18990 ATP-dependent protease 1.0 CSW01_04590 transcriptional regulator GcvA 0.56 10
Shewanella sp. ANA-3 0.68 Shewana3_1160 ATP-dependent protease, putative (RefSeq) 0.71 Shewana3_2894 DNA-binding transcriptional activator GcvA (RefSeq)
Shewanella oneidensis MR-1 0.67 SO3391 ATP-dependent protease, putative (NCBI ptt file) 0.70 SO1533 glycine cleavage system transcriptional activator, putative (NCBI ptt file) 0.37 46
Shewanella loihica PV-4 0.66 Shew_1976 putative ATP-dependent protease La-relatedprotein (RefSeq) 0.71 Shew_2764 DNA-binding transcriptional activator GcvA (RefSeq)
Shewanella amazonensis SB2B 0.66 Sama_2406 ATP-dependent protease, putative (RefSeq) 0.72 Sama_2429 DNA-binding transcriptional activator GcvA (RefSeq) low > 62
Magnetospirillum magneticum AMB-1 0.37 AMB_RS02920 ATP-dependent protease 0.30 AMB_RS04220 transcriptional regulator GcvA low > 64
Acinetobacter radioresistens SK82 0.37 MPMX26_01059 Lon protease 0.27 MPMX26_01927 Glycine cleavage system transcriptional activator
Dechlorosoma suillum PS 0.37 Dsui_2223 putative ATP-dependent protease 0.27 Dsui_2033 transcriptional regulator low > 51
Pseudomonas aeruginosa MRSN321 0.33 PFGADD_04785 endopeptidase La 0.31 PFGADD_00455 Glycine cleavage system transcriptional activator low > 99
Pseudomonas aeruginosa PA14 0.33 IKLFDK_00640 ATP-dependent protease 0.31 IKLFDK_23190 LysR family transcriptional regulator low > 98
Pseudomonas aeruginosa PUPa3 0.33 NPBIFN_04846 endopeptidase La 0.31 NPBIFN_00459 Glycine cleavage system transcriptional activator low > 101
Alteromonas macleodii MIT1002 0.32 MIT1002_01859 Lon protease 0.65 MIT1002_01520 Gcv operon activator low > 70
Pseudomonas stutzeri RCH2 0.32 Psest_3396 Predicted ATP-dependent protease 0.30 Psest_2739 Transcriptional regulator low > 67
Pseudomonas syringae pv. syringae B728a 0.32 Psyr_4259 ATP-dependent protease, putative 0.29 Psyr_5015 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.32 Psyr_4259 ATP-dependent protease, putative 0.29 Psyr_5015 transcriptional regulator, LysR family low > 86
Pseudomonas sp. SVBP6 0.32 COO64_RS03035 Lon protease family protein 0.34 COO64_RS14470 gcvA transcriptional regulator GcvA low > 91
Pseudomonas fluorescens GW456-L13 0.31 PfGW456L13_1459 ATP-dependent protease La (EC 3.4.21.53) Type II 0.29 PfGW456L13_555 Glycine cleavage system transcriptional activator low > 87
Pseudomonas sp. BP01 0.31 JOY50_RS24670 Lon protease family protein 0.30 JOY50_RS09180 LysR family transcriptional regulator low > 84
Pseudomonas sp. DMC3 0.31 GFF3971 hypothetical protein 0.29 GFF687 Glycine cleavage system transcriptional activator low > 89
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_15765 ATP-dependent protease 0.31 AO356_15125 LysR family transcriptional regulator low > 104
Pseudomonas sp. RS175 0.31 PFR28_03779 hypothetical protein 0.31 PFR28_04727 Glycine cleavage system transcriptional activator low > 88
Pseudomonas fluorescens FW300-N2E2 0.31 Pf6N2E2_5093 ATP-dependent protease La (EC 3.4.21.53) Type II 0.37 Pf6N2E2_1560 Glycine cleavage system transcriptional activator GcvA low > 103
Pseudomonas protegens RBAN4 0.31 FABNJH_26970 lonB putative ATP-dependent protease 0.30 FABNJH_19680 lysR Transcriptional regulator, LysR family
Pseudomonas fluorescens FW300-N2E3 0.31 AO353_14055 ATP-dependent protease 0.29 AO353_15505 LysR family transcriptional regulator low > 101
Pseudomonas segetis P6 0.31 ACVTMO_RS19595 Lon protease family protein 0.29 ACVTMO_RS01970 LysR family transcriptional regulator low > 75
Pseudomonas fluorescens SBW25 0.31 PFLU_RS26150 ATP-binding protein 0.30 PFLU_RS25165 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS26150 ATP-binding protein 0.30 PFLU_RS25165 LysR family transcriptional regulator low > 109
Pseudomonas simiae WCS417 0.31 PS417_24230 ATP-dependent protease 0.30 PS417_23350 LysR family transcriptional regulator low > 88
Pseudomonas orientalis W4I3 0.31 QF045_RS26485 AAA family ATPase 0.29 QF045_RS03520 LysR family transcriptional regulator low > 93
Pseudomonas lactucae CFBP13502 0.31 GEMAOFIL_04993 hypothetical protein 0.30 GEMAOFIL_02417 Glycine cleavage system transcriptional activator low > 96
Pseudomonas sp. S08-1 0.30 OH686_16260 ATP-dependent protease La Type II 0.31 OH686_11695 Transcriptional regulator, LysR family low > 80
Desulfovibrio vulgaris Hildenborough JW710 0.29 DVU1472 ATP-dependent protease, putative (TIGR) 0.31 DVU1402 transcriptional regulator, LysR family (TIGR) low > 55

Not shown: 4 genomes with orthologs for CSW01_18990 only; 66 genomes with orthologs for CSW01_04590 only