Conservation of cofitness between CSW01_00680 and CSW01_03780 in Vibrio cholerae E7946 ATCC 55056

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00680 Cof-type HAD-IIB family hydrolase 1.0 CSW01_03780 polyphosphate kinase 1 0.42 7
Pantoea agglomerans CFBP13505 P0401 0.50 PagCFBP13505_RS15315 sugar/pyridoxal phosphate phosphatase YigL 0.64 PagCFBP13505_RS15045 polyphosphate kinase 1 low > 74
Pectobacterium carotovorum WPP14 0.50 HER17_RS01415 sugar/pyridoxal phosphate phosphatase YigL 0.65 HER17_RS06425 polyphosphate kinase 1 low > 75
Pantoea sp. MT58 0.50 IAI47_18335 sugar/pyridoxal phosphate phosphatase YigL 0.64 IAI47_05155 polyphosphate kinase 1 low > 76
Serratia liquefaciens MT49 0.50 IAI46_00790 sugar/pyridoxal phosphate phosphatase YigL 0.65 IAI46_18915 polyphosphate kinase 1 low > 87
Klebsiella pneumoniae MKP103 0.49 KDGMDA_09760 sugar/pyridoxal phosphate phosphatase YigL 0.65 KDGMDA_27815 polyphosphate kinase 1 low > 95
Dickeya dadantii 3937 0.49 DDA3937_RS19825 sugar/pyridoxal phosphate phosphatase YigL 0.65 DDA3937_RS15150 polyphosphate kinase 1 low > 74
Dickeya dianthicola ME23 0.49 DZA65_RS21025 sugar/pyridoxal phosphate phosphatase YigL 0.65 DZA65_RS16045 polyphosphate kinase 1 low > 75
Dickeya dianthicola 67-19 0.49 HGI48_RS19980 sugar/pyridoxal phosphate phosphatase YigL 0.65 HGI48_RS15225 polyphosphate kinase 1 low > 71
Rahnella sp. WP5 0.49 EX31_RS15230 sugar/pyridoxal phosphate phosphatase YigL 0.65 EX31_RS22680 polyphosphate kinase 1 low > 89
Klebsiella michiganensis M5al 0.49 BWI76_RS01265 sugar/pyridoxal phosphate phosphatase YigL 0.65 BWI76_RS20995 RNA degradosome polyphosphate kinase low > 92
Escherichia coli ECRC98 0.48 JDDGAC_17965 yigL sugar/pyridoxal phosphate phosphatase YigL 0.66 JDDGAC_25745 ppk1 polyphosphate kinase 1 low > 87
Escherichia coli ECRC101 0.48 MCAODC_04845 yigL sugar/pyridoxal phosphate phosphatase YigL 0.66 MCAODC_12330 ppk1 polyphosphate kinase 1 low > 87
Escherichia coli ECRC99 0.48 KEDOAH_13810 yigL sugar/pyridoxal phosphate phosphatase YigL 0.66 KEDOAH_06420 ppk1 polyphosphate kinase 1 — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_04225 Pyridoxal phosphate phosphatase YigL 0.66 OHPLBJKB_01225 Polyphosphate kinase low > 74
Escherichia coli ECRC62 0.48 BNILDI_05060 yigL sugar/pyridoxal phosphate phosphatase YigL 0.66 BNILDI_12260 ppk1 polyphosphate kinase 1 low > 75
Escherichia coli BW25113 0.48 b3826 yigL predicted hydrolase (NCBI) 0.66 b2501 ppk polyphosphate kinase (NCBI) low > 76
Escherichia coli Nissle 1917 0.48 ECOLIN_RS21965 sugar/pyridoxal phosphate phosphatase YigL 0.66 ECOLIN_RS14200 polyphosphate kinase 1 — —
Escherichia coli ECOR27 0.48 NOLOHH_06470 yigL sugar/pyridoxal phosphate phosphatase YigL 0.66 NOLOHH_13450 ppk1 polyphosphate kinase 1 low > 76
Escherichia coli BL21 0.48 ECD_03705 pyridoxal phosphate phosphatase 0.66 ECD_02393 polyphosphate kinase, component of RNA degradosome low > 61
Escherichia fergusonii Becca 0.48 EFB2_04811 Pyridoxal phosphate phosphatase YigL 0.66 EFB2_01397 Polyphosphate kinase low > 86
Escherichia coli ECRC100 0.48 OKFHMN_14340 yigL sugar/pyridoxal phosphate phosphatase YigL 0.66 OKFHMN_21800 ppk1 polyphosphate kinase 1 low > 79
Escherichia coli ECRC102 0.48 NIAGMN_12095 yigL sugar/pyridoxal phosphate phosphatase YigL 0.66 NIAGMN_19570 ppk1 polyphosphate kinase 1 low > 80
Escherichia coli ECOR38 0.48 HEPCGN_13040 yigL sugar/pyridoxal phosphate phosphatase YigL 0.66 HEPCGN_20965 ppk1 polyphosphate kinase 1 low > 88
Erwinia tracheiphila HP pepo 2.2 0.48 IJEDHG_08715 yigL sugar/pyridoxal phosphate phosphatase YigL 0.64 IJEDHG_18355 ppk1 polyphosphate kinase 1 low > 61
Erwinia tracheiphila SCR3 0.48 LU632_RS24075 yigL sugar/pyridoxal phosphate phosphatase YigL 0.64 LU632_RS08260 ppk1 polyphosphate kinase 1 low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF252 Cof protein, HD superfamily hydrolase 0.64 GFF2167 Polyphosphate kinase (EC 2.7.4.1) low > 78
Enterobacter asburiae PDN3 0.47 EX28DRAFT_4491 HAD-superfamily hydrolase, subfamily IIB 0.66 EX28DRAFT_0166 polyphosphate kinase 1 low > 76
Enterobacter sp. TBS_079 0.47 MPMX20_04454 Pyridoxal phosphate phosphatase YigL 0.66 MPMX20_03356 Polyphosphate kinase low > 85
Erwinia amylovora T8 0.46 OLJFJH_06460 sugar/pyridoxal phosphate phosphatase YigL 0.63 OLJFJH_10565 polyphosphate kinase 1 low > 58
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS29060 Cof-type HAD-IIB family hydrolase 0.28 QEN71_RS04860 polyphosphate kinase 1 low > 153
Burkholderia phytofirmans PsJN 0.37 BPHYT_RS19055 COF family hydrolase 0.28 BPHYT_RS14110 polyphosphate kinase low > 109
Paraburkholderia graminis OAS925 0.37 ABIE53_000135 Cof subfamily protein (haloacid dehalogenase superfamily) 0.28 ABIE53_002988 polyphosphate kinase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.35 H281DRAFT_05732 hypothetical protein 0.28 H281DRAFT_04418 polyphosphate kinase low > 103
Pseudomonas sp. DMC3 0.17 GFF3449 Sugar phosphatase YidA 0.27 GFF336 Polyphosphate kinase low > 89
Pseudomonas fluorescens SBW25-INTG 0.17 PFLU_RS13145 Cof-type HAD-IIB family hydrolase 0.27 PFLU_RS29095 polyphosphate kinase 1 low > 109
Pseudomonas fluorescens SBW25 0.17 PFLU_RS13145 Cof-type HAD-IIB family hydrolase 0.27 PFLU_RS29095 polyphosphate kinase 1 low > 109
Pseudomonas simiae WCS417 0.17 PS417_12455 hydrolase 0.27 PS417_27435 polyphosphate kinase 0.15 69
Pseudomonas lactucae CFBP13502 0.17 GEMAOFIL_02738 Pyridoxal phosphate phosphatase YigL 0.27 GEMAOFIL_05622 Polyphosphate kinase low > 96
Pseudomonas fluorescens FW300-N1B4 0.16 Pf1N1B4_4727 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) 0.27 Pf1N1B4_2208 Polyphosphate kinase (EC 2.7.4.1) low > 87
Parabacteroides merdae CL09T00C40 0.16 HMPREF1078_RS07825 Cof-type HAD-IIB family hydrolase 0.35 HMPREF1078_RS16770 RNA degradosome polyphosphate kinase low > 61
Pseudomonas fluorescens FW300-N2C3 0.15 AO356_27845 hydrolase 0.27 AO356_12895 polyphosphate kinase low > 104
Pseudomonas fluorescens FW300-N2E2 0.14 Pf6N2E2_759 HMP-PP hydrolase (pyridoxal phosphatase) Cof, detected in genetic screen for thiamin metabolic genes (PMID:15292217) 0.27 Pf6N2E2_4453 Polyphosphate kinase (EC 2.7.4.1) low > 103
Cellulophaga baltica 18 0.11 M666_RS10120 HAD family hydrolase 0.43 M666_RS11490 polyphosphate kinase 1 low > 67

Not shown: 1 genomes with orthologs for CSW01_00680 only; 73 genomes with orthologs for CSW01_03780 only