Conservation of cofitness between CSW01_00530 and CSW01_03145 in Vibrio cholerae E7946 ATCC 55056

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00530 rhomboid family intramembrane serine protease GlpG 1.0 CSW01_03145 polynucleotide adenylyltransferase PcnB 0.42 12
Serratia liquefaciens MT49 0.44 IAI46_23905 rhomboid family intramembrane serine protease GlpG 0.56 IAI46_21220 polynucleotide adenylyltransferase PcnB low > 86
Enterobacter asburiae PDN3 0.41 EX28DRAFT_4122 rhomboid family protease GlpG 0.57 EX28DRAFT_3732 poly(A) polymerase low > 76
Pectobacterium carotovorum WPP14 0.41 HER17_RS01525 rhomboid family intramembrane serine protease GlpG 0.54 HER17_RS05570 polynucleotide adenylyltransferase PcnB low > 75
Klebsiella michiganensis M5al 0.41 BWI76_RS26180 rhomboid family intramembrane serine protease GlpG 0.56 BWI76_RS05005 polynucleotide adenylyltransferase low > 92
Enterobacter sp. TBS_079 0.40 MPMX20_04307 Rhomboid protease GlpG 0.56 MPMX20_00829 Poly(A) polymerase I low > 85
Shewanella oneidensis MR-1 0.40 SO4671 glpG glpG protein (NCBI ptt file) 0.52 SO0872 pcnB polyA polymerase (NCBI ptt file) low > 76
Erwinia amylovora T8 0.40 OLJFJH_04215 rhomboid family intramembrane serine protease GlpG 0.54 OLJFJH_00775 polynucleotide adenylyltransferase PcnB low > 58
Shewanella sp. ANA-3 0.40 Shewana3_4107 rhomboid family protein (RefSeq) 0.52 Shewana3_3406 poly(A) polymerase (RefSeq) low > 73
Erwinia tracheiphila SCR3 0.39 LU632_RS23010 glpG rhomboid family intramembrane serine protease GlpG 0.53 LU632_RS20090 pcnB polynucleotide adenylyltransferase PcnB low > 74
Shewanella amazonensis SB2B 0.39 Sama_0095 glpG protein (RefSeq) 0.50 Sama_0778 tRNA nucleotidyltransferase (CCA-adding enzyme) (RefSeq) low > 62
Pantoea sp. MT58 0.39 IAI47_01760 rhomboid family intramembrane serine protease GlpG 0.56 IAI47_15645 polynucleotide adenylyltransferase PcnB low > 76
Escherichia coli ECRC62 0.39 BNILDI_02785 glpG rhomboid family intramembrane serine protease GlpG 0.56 BNILDI_08970 pcnB polynucleotide adenylyltransferase PcnB 0.93 1
Escherichia coli ECRC102 0.38 NIAGMN_14705 glpG rhomboid family intramembrane serine protease GlpG 0.56 NIAGMN_08205 pcnB polynucleotide adenylyltransferase PcnB — —
Escherichia coli ECRC98 0.38 JDDGAC_20565 glpG rhomboid family intramembrane serine protease GlpG 0.56 JDDGAC_13950 pcnB polynucleotide adenylyltransferase PcnB low > 86
Escherichia coli ECRC99 0.38 KEDOAH_11205 glpG rhomboid family intramembrane serine protease GlpG 0.56 KEDOAH_17800 pcnB polynucleotide adenylyltransferase PcnB — —
Escherichia coli Nissle 1917 0.38 ECOLIN_RS26040 rhomboid family intramembrane serine protease GlpG 0.56 ECOLIN_RS00790 polynucleotide adenylyltransferase PcnB — —
Escherichia coli ECOR27 0.38 NOLOHH_08730 glpG rhomboid family intramembrane serine protease GlpG 0.56 NOLOHH_02700 pcnB polynucleotide adenylyltransferase PcnB 0.51 54
Escherichia coli ECRC100 0.38 OKFHMN_16935 glpG rhomboid family intramembrane serine protease GlpG 0.56 OKFHMN_10355 pcnB polynucleotide adenylyltransferase PcnB low > 80
Escherichia coli ECRC101 0.38 MCAODC_07465 glpG rhomboid family intramembrane serine protease GlpG 0.56 MCAODC_00870 pcnB polynucleotide adenylyltransferase PcnB low > 87
Escherichia coli BW25113 0.38 b3424 glpG predicted intramembrane serine protease (NCBI) 0.56 b0143 pcnB poly(A) polymerase I (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.38 OHPLBJKB_00280 Rhomboid protease GlpG 0.56 OHPLBJKB_03519 Poly(A) polymerase I low > 73
Escherichia coli BL21 0.38 ECD_03275 rhomboid intramembrane serine protease 0.56 ECD_00142 poly(A) polymerase low > 61
Escherichia fergusonii Becca 0.38 EFB2_00405 Rhomboid protease GlpG 0.56 EFB2_03901 Poly(A) polymerase I low > 86
Escherichia coli ECOR38 0.38 HEPCGN_15755 glpG rhomboid family intramembrane serine protease GlpG 0.56 HEPCGN_08305 pcnB polynucleotide adenylyltransferase PcnB low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.37 GFF589 GlpG protein (membrane protein of glp regulon) 0.57 GFF89 Poly(A) polymerase (EC 2.7.7.19) low > 78
Shewanella loihica PV-4 0.37 Shew_3712 rhomboid family protein (RefSeq) 0.52 Shew_3131 poly(A) polymerase (RefSeq) low > 60
Dickeya dianthicola 67-19 0.36 HGI48_RS19805 rhomboid family intramembrane serine protease GlpG 0.56 HGI48_RS16060 polynucleotide adenylyltransferase PcnB low > 71
Dickeya dadantii 3937 0.36 DDA3937_RS19675 rhomboid family intramembrane serine protease GlpG 0.56 DDA3937_RS15945 polynucleotide adenylyltransferase PcnB low > 74
Dickeya dianthicola ME23 0.36 DZA65_RS20895 rhomboid family intramembrane serine protease GlpG 0.57 DZA65_RS17145 polynucleotide adenylyltransferase PcnB low > 75
Alteromonas macleodii MIT1002 0.28 MIT1002_00066 Rhomboid protease GlpG 0.52 MIT1002_03692 Poly(A) polymerase I precursor low > 70
Marinobacter adhaerens HP15 0.18 HP15_1062 rhomboid family protein 0.44 HP15_326 polyA polymerase low > 73
Pseudomonas sp. DMC3 0.18 GFF1034 Rhomboid protease GlpG 0.45 GFF4029 Poly(A) polymerase I low > 89
Pseudomonas fluorescens GW456-L13 0.16 PfGW456L13_3328 GlpG protein (membrane protein of glp regulon) 0.44 PfGW456L13_1523 Poly(A) polymerase (EC 2.7.7.19) low > 87
Pseudomonas sp. SVBP6 0.16 COO64_RS05505 rhomboid family intramembrane serine protease 0.46 COO64_RS15095 polynucleotide adenylyltransferase PcnB low > 93
Pseudomonas syringae pv. syringae B728a 0.15 Psyr_1687 Rhomboid-like protein 0.45 Psyr_0830 Poly(A) polymerase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.15 Psyr_1687 Rhomboid-like protein 0.45 Psyr_0830 Poly(A) polymerase low > 86
Pseudomonas aeruginosa PA14 0.15 IKLFDK_15690 rhomboid family intramembrane serine protease 0.44 IKLFDK_29965 polynucleotide adenylyltransferase PcnB low > 101
Pseudomonas fluorescens FW300-N2E3 0.14 AO353_23615 peptidase S54 0.44 AO353_14395 poly(A) polymerase low > 101
Pseudomonas sp. RS175 0.14 PFR28_01571 Rhomboid protease GlpG 0.45 PFR28_03719 Poly(A) polymerase I low > 88
Pseudomonas stutzeri RCH2 0.13 Psest_1919 Uncharacterized membrane protein (homolog of Drosophila rhomboid) 0.41 Psest_0998 poly(A) polymerase low > 67

Not shown: 1 genomes with orthologs for CSW01_00530 only; 31 genomes with orthologs for CSW01_03145 only