Conservation of cofitness between CSW01_12295 and CSW01_02835 in Vibrio cholerae E7946 ATCC 55056

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12295 cell division protein ZapD 1.0 CSW01_02835 RNA polymerase sigma factor RpoS 0.61 16
Pantoea sp. MT58 0.43 IAI47_15875 cell division protein ZapD 0.71 IAI47_04235 RNA polymerase sigma factor RpoS low > 76
Rahnella sp. WP5 0.43 EX31_RS03545 cell division protein ZapD 0.70 EX31_RS07825 RNA polymerase sigma factor RpoS low > 89
Serratia liquefaciens MT49 0.42 IAI46_03500 cell division protein ZapD 0.70 IAI46_03790 RNA polymerase sigma factor RpoS low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.41 OHPLBJKB_03558 Cell division protein ZapD 0.70 OHPLBJKB_00992 RNA polymerase sigma factor RpoS low > 74
Escherichia coli BL21 0.41 ECD_00102 FtsZ stabilizer 0.70 ECD_02591 RNA polymerase, sigma S (sigma 38) factor low > 61
Erwinia tracheiphila HP pepo 2.2 0.41 IJEDHG_05865 zapD cell division protein ZapD 0.69 IJEDHG_17500 rpoS RNA polymerase sigma factor RpoS low > 61
Erwinia tracheiphila SCR3 0.41 LU632_RS03010 zapD cell division protein ZapD 0.69 LU632_RS06480 rpoS RNA polymerase sigma factor RpoS low > 73
Escherichia fergusonii Becca 0.41 EFB2_03946 Cell division protein ZapD 0.70 EFB2_01169 RNA polymerase sigma factor RpoS low > 86
Escherichia coli ECOR27 0.41 NOLOHH_02910 zapD cell division protein ZapD 0.70 NOLOHH_12310 rpoS RNA polymerase sigma factor RpoS low > 76
Escherichia coli BW25113 0.41 b0102 yacF hypothetical protein (NCBI) 0.70 b2741 rpoS RNA polymerase sigma factor (NCBI) low > 76
Escherichia coli ECRC62 0.41 BNILDI_08700 zapD cell division protein ZapD 0.70 BNILDI_10860 rpoS RNA polymerase sigma factor RpoS low > 75
Escherichia coli ECOR38 0.41 HEPCGN_08545 zapD cell division protein ZapD 0.70 HEPCGN_19675 rpoS RNA polymerase sigma factor RpoS low > 88
Escherichia coli ECRC100 0.41 OKFHMN_10565 zapD cell division protein ZapD 0.70 OKFHMN_20495 rpoS RNA polymerase sigma factor RpoS low > 79
Escherichia coli ECRC101 0.41 MCAODC_01080 zapD cell division protein ZapD 0.70 MCAODC_11020 rpoS RNA polymerase sigma factor RpoS low > 87
Klebsiella michiganensis M5al 0.41 BWI76_RS04815 cell division protein ZapD 0.70 BWI76_RS22645 RNA polymerase sigma factor RpoS low > 92
Enterobacter sp. TBS_079 0.41 MPMX20_00794 Cell division protein ZapD 0.70 MPMX20_03627 RNA polymerase sigma factor RpoS low > 85
Escherichia coli ECRC98 0.41 JDDGAC_14160 zapD cell division protein ZapD 0.70 JDDGAC_24160 rpoS RNA polymerase sigma factor RpoS low > 87
Escherichia coli ECRC102 0.41 NIAGMN_08415 zapD cell division protein ZapD 0.70 NIAGMN_18265 rpoS RNA polymerase sigma factor RpoS low > 80
Pectobacterium carotovorum WPP14 0.41 HER17_RS03220 cell division protein ZapD 0.68 HER17_RS04350 RNA polymerase sigma factor RpoS low > 75
Enterobacter asburiae PDN3 0.40 EX28DRAFT_3696 Uncharacterized protein conserved in bacteria 0.70 EX28DRAFT_2837 RNA polymerase, sigma 38 subunit, RpoS low > 76
Dickeya dadantii 3937 0.39 DDA3937_RS17985 cell division protein ZapD 0.69 DDA3937_RS16875 RNA polymerase sigma factor RpoS — —
Dickeya dianthicola ME23 0.39 DZA65_RS19065 cell division protein ZapD 0.68 DZA65_RS18020 RNA polymerase sigma factor RpoS low > 75
Dickeya dianthicola 67-19 0.39 HGI48_RS17920 cell division protein ZapD 0.68 HGI48_RS16945 RNA polymerase sigma factor RpoS low > 71
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF136 FIG002842: hypothetical protein 0.70 GFF4788 RNA polymerase sigma factor RpoS low > 78
Klebsiella pneumoniae MKP103 0.37 KDGMDA_13050 cell division protein ZapD 0.70 KDGMDA_03220 RNA polymerase sigma factor RpoS low > 95
Erwinia amylovora T8 0.37 OLJFJH_01075 cell division protein ZapD 0.70 OLJFJH_09380 RNA polymerase sigma factor RpoS low > 58
Alteromonas macleodii MIT1002 0.37 MIT1002_03013 Z ring-associated protein D 0.69 MIT1002_00625 RNA polymerase sigma factor RpoS low > 70
Shewanella oneidensis MR-1 0.37 SO0412 conserved hypothetical protein (NCBI ptt file) 0.66 SO3432 rpoS RNA polymerase sigma-38 factor (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.37 Shew_3442 hypothetical protein (RefSeq) 0.68 Shew_1213 RpoD family RNA polymerase sigma factor (RefSeq) low > 60
Shewanella sp. ANA-3 0.36 Shewana3_0415 hypothetical protein (RefSeq) 0.66 Shewana3_1124 RNA polymerase, sigma 38 subunit, RpoS (RefSeq) low > 73
Shewanella amazonensis SB2B 0.35 Sama_0365 hypothetical protein (RefSeq) 0.68 Sama_1044 RNA polymerase sigma-38 factor (RefSeq) low > 62
Herbaspirillum seropedicae SmR1 0.26 HSERO_RS01750 hypothetical protein 0.44 HSERO_RS14830 RNA polymerase sigma factor RpoS — —
Paraburkholderia graminis OAS925 0.25 ABIE53_003598 cell division protein ZapD 0.38 ABIE53_002057 RNA polymerase nonessential primary-like sigma factor 0.32 81
Paraburkholderia bryophila 376MFSha3.1 0.25 H281DRAFT_06253 cell division protein ZapD 0.38 H281DRAFT_00844 RNA polymerase, sigma 38 subunit, RpoS — —
Burkholderia phytofirmans PsJN 0.25 BPHYT_RS17165 cell division protein ZapD 0.38 BPHYT_RS09115 RNA polymerase sigma factor RpoS low > 109
Variovorax sp. SCN45 0.25 GFF2504 Cell division protein ZapD 0.34 GFF2842 RNA polymerase sigma factor RpoS low > 127
Paraburkholderia sabiae LMG 24235 0.25 QEN71_RS27325 cell division protein ZapD 0.38 QEN71_RS22240 RNA polymerase sigma factor RpoS low > 153
Dechlorosoma suillum PS 0.25 Dsui_1057 hypothetical protein 0.44 Dsui_1971 RNA polymerase sigma factor RpoS — —

Not shown: 15 genomes with orthologs for CSW01_12295 only; 24 genomes with orthologs for CSW01_02835 only