Conservation of cofitness between CSW01_07965 and CSW01_02505 in Vibrio cholerae E7946 ATCC 55056

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_07965 LysR family transcriptional regulator 1.0 CSW01_02505 SprT family protein 0.59 11
Erwinia amylovora T8 0.38 OLJFJH_05375 transcriptional regulator 0.44 OLJFJH_08585 SprT family zinc-dependent metalloprotease low > 58
Rahnella sp. WP5 0.36 EX31_RS04240 LysR family transcriptional regulator 0.43 EX31_RS02650 SprT family zinc-dependent metalloprotease low > 89
Pectobacterium carotovorum WPP14 0.36 HER17_RS18045 LysR family transcriptional regulator 0.47 HER17_RS02650 SprT family zinc-dependent metalloprotease low > 75
Dickeya dadantii 3937 0.36 DDA3937_RS03225 LysR family transcriptional regulator 0.46 DDA3937_RS18545 SprT family zinc-dependent metalloprotease low > 74
Dickeya dianthicola ME23 0.35 DZA65_RS03420 LysR family transcriptional regulator 0.46 DZA65_RS19615 SprT family zinc-dependent metalloprotease low > 75
Dickeya dianthicola 67-19 0.35 HGI48_RS03375 LysR family transcriptional regulator 0.45 HGI48_RS18480 SprT family zinc-dependent metalloprotease low > 71
Klebsiella michiganensis M5al 0.35 BWI76_RS16740 transcriptional regulator 0.45 BWI76_RS24060 SprT family protein low > 92
Pantoea agglomerans CFBP13505 P0401 0.35 PagCFBP13505_RS12040 LysR family transcriptional regulator 0.45 PagCFBP13505_RS16065 SprT family zinc-dependent metalloprotease low > 74
Enterobacter asburiae PDN3 0.34 EX28DRAFT_2404 Transcriptional regulator 0.45 EX28DRAFT_2982 Uncharacterized protein conserved in bacteria low > 76
Pantoea sp. MT58 0.34 IAI47_21735 LysR family transcriptional regulator 0.44 IAI47_03630 SprT family zinc-dependent metalloprotease low > 76
Enterobacter sp. TBS_079 0.34 MPMX20_01221 HTH-type transcriptional regulator BenM 0.46 MPMX20_03802 Protein SprT low > 85
Klebsiella pneumoniae MKP103 0.34 KDGMDA_23755 transcriptional regulator 0.46 KDGMDA_04575 SprT family zinc-dependent metalloprotease low > 95
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.32 GFF3076 LysR family transcriptional regulator STM3121 0.45 GFF3046 Protein sprT low > 78
Pseudomonas sp. BP01 0.28 JOY50_RS09345 LysR family transcriptional regulator 0.35 JOY50_RS23830 SprT family zinc-dependent metalloprotease low > 84
Pseudomonas aeruginosa PA14 0.28 IKLFDK_28390 LysR family transcriptional regulator 0.36 IKLFDK_05515 SprT family zinc-dependent metalloprotease low > 98
Pseudomonas aeruginosa PUPa3 0.28 DQ20_RS51110 LysR family transcriptional regulator 0.36 DQ20_RS46325 SprT family zinc-dependent metalloprotease low > 101
Pseudomonas aeruginosa MRSN321 0.28 DY961_RS10965 LysR family transcriptional regulator 0.36 DY961_RS06470 SprT family zinc-dependent metalloprotease low > 100
Pseudomonas stutzeri RCH2 0.28 Psest_3707 Transcriptional regulator 0.36 Psest_3037 Uncharacterized protein conserved in bacteria low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.27 Psyr_0421 transcriptional regulator, LysR family 0.37 Psyr_3706 Protein of unknown function DUF335 low > 86
Pseudomonas putida KT2440 0.27 PP_5071 putative DNA-binding transcriptional regulator 0.34 PP_1639 conserved protein of unknown function, SprT family low > 96
Pseudomonas syringae pv. syringae B728a 0.27 Psyr_0421 transcriptional regulator, LysR family 0.37 Psyr_3706 Protein of unknown function DUF335 low > 86
Pseudomonas sp. SVBP6 0.27 COO64_RS13110 LysR family transcriptional regulator 0.37 COO64_RS07405 SprT family zinc-dependent metalloprotease low > 93
Pseudomonas orientalis W4I3 0.27 QF045_RS05080 LysR substrate-binding domain-containing protein 0.37 QF045_RS18180 SprT family zinc-dependent metalloprotease low > 93
Pseudomonas sp. RS175 0.27 PFR28_05019 HTH-type transcriptional regulator BenM 0.37 PFR28_03238 Protein SprT low > 88
Pseudomonas simiae WCS417 0.27 PS417_02020 LysR family transcriptional regulator 0.37 PS417_16425 sprT low > 88
Pseudomonas fluorescens FW300-N2E2 0.26 Pf6N2E2_3735 LysR family transcriptional regulator YnfL 0.38 Pf6N2E2_5709 Protein sprT low > 103
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS02065 LysR family transcriptional regulator 0.37 PFLU_RS18465 SprT family zinc-dependent metalloprotease low > 109
Pseudomonas fluorescens SBW25 0.26 PFLU_RS02065 LysR family transcriptional regulator 0.37 PFLU_RS18465 SprT family zinc-dependent metalloprotease low > 109
Pseudomonas fluorescens FW300-N2C3 0.26 AO356_09290 LysR family transcriptional regulator 0.38 AO356_18990 Zn-dependent metalloprotease low > 104
Pseudomonas lactucae CFBP13502 0.26 GEMAOFIL_00636 HTH-type transcriptional regulator BenM 0.37 GEMAOFIL_03612 Protein SprT low > 96
Pseudomonas fluorescens GW456-L13 0.26 PfGW456L13_255 LysR family transcriptional regulator YnfL 0.37 PfGW456L13_2018 Protein sprT low > 87
Pseudomonas fluorescens FW300-N1B4 0.25 Pf1N1B4_1530 LysR family transcriptional regulator YnfL 0.37 Pf1N1B4_3489 Protein sprT low > 87
Pseudomonas sp. DMC3 0.25 GFF3108 HTH-type transcriptional regulator BenM 0.35 GFF4835 Protein SprT low > 89
Pseudomonas fluorescens FW300-N2E3 0.25 AO353_12600 LysR family transcriptional regulator 0.38 AO353_02790 Zn-dependent metalloprotease low > 101
Escherichia coli HS(pFamp)R (ATCC 700891) 0.23 OHPLBJKB_02131 Hca operon transcriptional activator HcaR 0.46 OHPLBJKB_00774 Protein SprT low > 74
Escherichia coli ECRC102 0.23 NIAGMN_00340 ynfL Uncharacterized HTH-type transcriptional regulator YnfL 0.46 NIAGMN_17055 sprT SprT family zinc-dependent metalloprotease low > 80
Escherichia coli BL21 0.23 ECD_01564 LysR family putative transcriptional regulator 0.46 ECD_02774 Zn-dependent metalloprotease-related protein — —
Escherichia fergusonii Becca 0.23 EFB2_02397 Hca operon transcriptional activator HcaR 0.46 EFB2_00958 Protein SprT low > 86
Escherichia coli ECRC62 0.23 BNILDI_17030 ynfL Uncharacterized HTH-type transcriptional regulator YnfL 0.46 BNILDI_09740 sprT SprT family zinc-dependent metalloprotease low > 75
Escherichia coli ECRC99 0.23 KEDOAH_00370 ynfL Uncharacterized HTH-type transcriptional regulator YnfL 0.46 KEDOAH_08850 sprT SprT family zinc-dependent metalloprotease — —
Escherichia coli ECRC98 0.23 JDDGAC_02325 ynfL Uncharacterized HTH-type transcriptional regulator YnfL 0.46 JDDGAC_22920 sprT SprT family zinc-dependent metalloprotease low > 87
Escherichia coli Nissle 1917 0.23 ECOLIN_RS08910 LysR family transcriptional regulator 0.46 ECOLIN_RS16380 SprT family zinc-dependent metalloprotease — —
Escherichia coli ECOR38 0.23 HEPCGN_06110 ynfL Uncharacterized HTH-type transcriptional regulator YnfL 0.46 HEPCGN_18595 sprT SprT family zinc-dependent metalloprotease low > 88
Escherichia coli ECOR27 0.23 NOLOHH_18240 ynfL Uncharacterized HTH-type transcriptional regulator YnfL 0.46 NOLOHH_11160 sprT SprT family zinc-dependent metalloprotease low > 76
Escherichia coli ECRC101 0.23 MCAODC_17675 ynfL Uncharacterized HTH-type transcriptional regulator YnfL 0.46 MCAODC_09810 sprT SprT family zinc-dependent metalloprotease low > 87
Escherichia coli BW25113 0.23 b1595 ynfL predicted DNA-binding transcriptional regulator (NCBI) 0.46 b2944 sprT hypothetical protein (NCBI) low > 76
Escherichia coli ECRC100 0.23 OKFHMN_27735 ynfL Uncharacterized HTH-type transcriptional regulator YnfL 0.45 OKFHMN_19290 sprT SprT family zinc-dependent metalloprotease low > 79
Pseudomonas segetis P6 0.19 ACVTMO_RS04005 LysR family transcriptional regulator 0.34 ACVTMO_RS08950 SprT family zinc-dependent metalloprotease low > 75

Not shown: 40 genomes with orthologs for CSW01_07965 only; 3 genomes with orthologs for CSW01_02505 only