Conservation of cofitness between CSW01_03485 and CSW01_01960 in Vibrio cholerae E7946 ATCC 55056

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_03485 branched-chain amino acid transport system II carrier protein 1.0 CSW01_01960 hypothetical protein 0.41 3
Shewanella amazonensis SB2B 0.50 Sama_2740 branched-chain amino acid transport system II carrier protein BrnQ (RefSeq) 0.69 Sama_1665 hypothetical protein (RefSeq) low > 62
Shewanella loihica PV-4 0.49 Shew_0769 branched-chain amino acid transport system II carrier protein (RefSeq) 0.63 Shew_1893 hypothetical protein (RefSeq) low > 60
Pseudomonas aeruginosa PA14 0.42 IKLFDK_07615 branched-chain amino acid transport system II carrier protein 0.68 IKLFDK_27020 Uncharacterised protein family UPF0047 low > 101
Pseudomonas stutzeri RCH2 0.40 Psest_2489 branched-chain amino acid uptake carrier 0.64 Psest_3770 secondary thiamine-phosphate synthase enzyme low > 67
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_5860 Branched-chain amino acid transport system carrier protein 0.67 Pf6N2E2_4413 FIG004064: hypothetical protein low > 103
Pseudomonas sp. RS175 0.39 PFR28_03091 Branched-chain amino acid transport system 2 carrier protein 0.67 PFR28_04381 hypothetical protein low > 88
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_4264 Branched-chain amino acid transport system carrier protein 0.68 PfGW456L13_839 FIG004064: hypothetical protein low > 87
Pseudomonas fluorescens FW300-N2C3 0.39 AO356_19720 branched-chain amino acid ABC transporter substrate-binding protein 0.67 AO356_12710 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E3 0.38 AO353_01810 branched-chain amino acid ABC transporter substrate-binding protein 0.68 AO353_09065 hypothetical protein low > 101
Pseudomonas sp. S08-1 0.38 OH686_01945 branched-chain amino acid transport system II carrier protein 0.68 OH686_13770 UPF0047 protein YjbQ low > 80
Dickeya dadantii 3937 0.38 DDA3937_RS05445 branched-chain amino acid transport system II carrier protein 0.64 DDA3937_RS17595 YjbQ family protein low > 74
Escherichia fergusonii Becca 0.38 EFB2_03656 Branched-chain amino acid transport system 2 carrier protein 0.64 EFB2_04535 hypothetical protein low > 86
Escherichia coli Nissle 1917 0.38 ECOLIN_RS02420 branched-chain amino acid transporter carrier protein BrnQ 0.64 ECOLIN_RS23475 secondary thiamine-phosphate synthase enzyme YjbQ low > 55
Escherichia coli ECOR38 0.38 HEPCGN_07175 brnQ branched-chain amino acid transporter carrier protein BrnQ 0.63 HEPCGN_11520 yjbQ UPF0047 protein YjbQ low > 87
Escherichia coli BL21 0.38 ECD_00349 branched-chain amino acid transport system 2 carrier protein; LIV-II transport system for Ile, Leu, and Val 0.63 ECD_03928 thiamine phosphate synthase low > 61
Escherichia coli ECRC99 0.38 KEDOAH_19430 brnQ branched-chain amino acid transporter carrier protein BrnQ 0.63 KEDOAH_15245 yjbQ UPF0047 protein YjbQ — —
Pseudomonas sp. DMC3 0.38 GFF2525 Branched-chain amino acid transport system 2 carrier protein 0.68 GFF373 hypothetical protein low > 89
Escherichia coli ECOR27 0.38 NOLOHH_01465 brnQ branched-chain amino acid transporter carrier protein BrnQ 0.63 NOLOHH_05155 yjbQ UPF0047 protein YjbQ low > 75
Escherichia coli BW25113 0.38 b0401 brnQ predicted branched chain amino acid transporter (LIV-II) (NCBI) 0.63 b4056 yjbQ hypothetical protein (NCBI) low > 76
Escherichia coli ECRC62 0.38 BNILDI_22880 brnQ branched-chain amino acid transporter carrier protein BrnQ 0.63 BNILDI_06370 yjbQ UPF0047 protein YjbQ low > 75
Escherichia coli ECRC98 0.38 JDDGAC_12190 brnQ branched-chain amino acid transporter carrier protein BrnQ 0.63 JDDGAC_16540 yjbQ UPF0047 protein YjbQ low > 86
Escherichia coli ECRC100 0.38 OKFHMN_08535 brnQ branched-chain amino acid transporter carrier protein BrnQ 0.63 OKFHMN_12905 yjbQ UPF0047 protein YjbQ low > 80
Escherichia coli ECRC101 0.38 MCAODC_27760 brnQ branched-chain amino acid transporter carrier protein BrnQ 0.63 MCAODC_03415 yjbQ UPF0047 protein YjbQ low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.38 OHPLBJKB_03275 Branched-chain amino acid transport system 2 carrier protein 0.63 OHPLBJKB_03985 hypothetical protein low > 73
Escherichia coli ECRC102 0.38 NIAGMN_06590 brnQ branched-chain amino acid transporter carrier protein BrnQ 0.63 NIAGMN_10750 yjbQ UPF0047 protein YjbQ — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.37 Psyr_2015 Branched-chain amino acid transport system II carrier protein 0.66 Psyr_0188 Protein of unknown function UPF0047 low > 86
Pseudomonas syringae pv. syringae B728a 0.37 Psyr_2015 Branched-chain amino acid transport system II carrier protein 0.66 Psyr_0188 Protein of unknown function UPF0047 low > 86
Klebsiella michiganensis M5al 0.37 BWI76_RS06240 branched-chain amino acid transport system 2 carrier protein BrnQ 0.64 BWI76_RS01935 thiamin phosphate synthase low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.37 GFF4299 Branched-chain amino acid transport system carrier protein 0.58 GFF1425 FIG004064: hypothetical protein low > 78
Enterobacter sp. TBS_079 0.37 MPMX20_00988 Branched-chain amino acid transport system 2 carrier protein 0.64 MPMX20_00274 hypothetical protein low > 85
Pseudomonas fluorescens SBW25 0.37 PFLU_RS08980 branched-chain amino acid transport system II carrier protein 0.66 PFLU_RS29295 YjbQ family protein low > 109
Enterobacter asburiae PDN3 0.37 EX28DRAFT_2573 branched-chain amino acid uptake carrier 0.65 EX28DRAFT_4248 secondary thiamine-phosphate synthase enzyme low > 76
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS08980 branched-chain amino acid transport system II carrier protein 0.66 PFLU_RS29295 YjbQ family protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.37 Pf1N1B4_3686 Branched-chain amino acid transport system carrier protein 0.68 Pf1N1B4_2168 FIG004064: hypothetical protein low > 87
Pectobacterium carotovorum WPP14 0.37 HER17_RS16020 branched-chain amino acid transport system II carrier protein 0.69 HER17_RS03555 secondary thiamine-phosphate synthase enzyme YjbQ low > 75
Pantoea sp. MT58 0.36 IAI47_14835 branched-chain amino acid transporter carrier protein BrnQ 0.65 IAI47_17830 YjbQ family protein low > 76
Serratia liquefaciens MT49 0.36 IAI46_04795 branched-chain amino acid transport system II carrier protein 0.59 IAI46_22925 YjbQ family protein low > 86
Erwinia amylovora T8 0.35 OLJFJH_18165 branched-chain amino acid transporter carrier protein BrnQ 0.64 OLJFJH_03445 Uncharacterised protein family UPF0047 low > 58
Pseudomonas simiae WCS417 0.35 PS417_08920 branched-chain amino acid ABC transporter substrate-binding protein 0.67 PS417_27610 hypothetical protein low > 88
Cellulophaga baltica 18 0.17 M666_RS05680 branched-chain amino acid transport system II carrier protein 0.60 M666_RS10125 secondary thiamine-phosphate synthase enzyme YjbQ low > 67

Not shown: 12 genomes with orthologs for CSW01_03485 only; 36 genomes with orthologs for CSW01_01960 only