Conservation of cofitness between CSW01_04930 and CSW01_01445 in Vibrio cholerae E7946 ATCC 55056

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04930 phosphoenolpyruvate-protein phosphotransferase PtsI 1.0 CSW01_01445 lysine decarboxylase 0.74 2
Rahnella sp. WP5 0.75 EX31_RS20185 phosphoenolpyruvate-protein phosphotransferase PtsI 0.71 EX31_RS12950 lysine decarboxylase LdcC low > 89
Klebsiella michiganensis M5al 0.74 BWI76_RS20650 phosphoenolpyruvate--protein phosphotransferase 0.78 BWI76_RS07195 lysine decarboxylase CadA low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF2047 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) 0.77 GFF2452 Lysine decarboxylase, inducible (EC 4.1.1.18) low > 78
Enterobacter asburiae PDN3 0.74 EX28DRAFT_0212 phosphoenolpyruvate-protein phosphotransferase 0.71 EX28DRAFT_3774 Arginine/lysine/ornithine decarboxylases — —
Escherichia coli BW25113 0.73 b2416 ptsI PEP-protein phosphotransferase of PTS system (enzyme I) (NCBI) 0.78 b4131 cadA lysine decarboxylase 1 (NCBI) — —
Enterobacter sp. TBS_079 0.73 MPMX20_03310 Phosphoenolpyruvate-protein phosphotransferase 0.71 MPMX20_00870 Constitutive lysine decarboxylase low > 85
Klebsiella pneumoniae MKP103 0.73 KDGMDA_27495 phosphoenolpyruvate-protein phosphotransferase PtsI 0.78 KDGMDA_15475 lysine decarboxylase CadA low > 95
Escherichia fergusonii Becca 0.73 EFB2_01460 Phosphoenolpyruvate-protein phosphotransferase 0.78 EFB2_04451 Inducible lysine decarboxylase — —
Escherichia coli ECRC102 0.73 NIAGMN_19960 ptsI phosphoenolpyruvate-protein phosphotransferase PtsI 0.78 NIAGMN_10320 cadA lysine decarboxylase CadA low > 80
Escherichia coli ECRC62 0.73 BNILDI_12735 ptsI phosphoenolpyruvate-protein phosphotransferase PtsI 0.78 BNILDI_06750 cadA lysine decarboxylase CadA — —
Escherichia coli ECRC101 0.73 MCAODC_12720 ptsI phosphoenolpyruvate-protein phosphotransferase PtsI 0.78 MCAODC_02985 cadA lysine decarboxylase CadA low > 87
Escherichia coli ECRC99 0.73 KEDOAH_06030 ptsI phosphoenolpyruvate-protein phosphotransferase PtsI 0.78 KEDOAH_15690 cadA lysine decarboxylase CadA — —
Escherichia coli BL21 0.73 ECD_02316 PEP-protein phosphotransferase of PTS system (enzyme I) 0.78 ECD_04002 lysine decarboxylase, acid-inducible — —
Escherichia coli ECOR38 0.73 HEPCGN_21370 ptsI phosphoenolpyruvate-protein phosphotransferase PtsI 0.78 HEPCGN_11110 cadA lysine decarboxylase CadA low > 88
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_01307 Phosphoenolpyruvate-protein phosphotransferase 0.78 OHPLBJKB_03912 Inducible lysine decarboxylase — —
Escherichia coli ECRC98 0.73 JDDGAC_26140 ptsI phosphoenolpyruvate-protein phosphotransferase PtsI 0.78 JDDGAC_16110 cadA lysine decarboxylase CadA — —
Escherichia coli ECRC100 0.73 OKFHMN_22190 ptsI phosphoenolpyruvate-protein phosphotransferase PtsI 0.78 OKFHMN_12475 cadA lysine decarboxylase CadA low > 79
Escherichia coli ECOR27 0.73 NOLOHH_13870 ptsI phosphoenolpyruvate-protein phosphotransferase PtsI 0.78 NOLOHH_04740 cadA lysine decarboxylase CadA — —
Erwinia amylovora T8 0.73 OLJFJH_10855 phosphoenolpyruvate-protein phosphotransferase PtsI 0.70 OLJFJH_00545 lysine decarboxylase LdcC low > 58
Serratia liquefaciens MT49 0.73 IAI46_18460 phosphoenolpyruvate-protein phosphotransferase PtsI 0.77 IAI46_20145 lysine decarboxylase CadA low > 87
Pantoea agglomerans CFBP13505 P0401 0.73 PagCFBP13505_RS19970 phosphoenolpyruvate-protein phosphotransferase PtsI 0.70 PagCFBP13505_RS13560 lysine decarboxylase LdcC low > 74
Pantoea sp. MT58 0.73 IAI47_05425 phosphoenolpyruvate-protein phosphotransferase PtsI 0.70 IAI47_15445 lysine decarboxylase LdcC low > 76
Cupriavidus basilensis FW507-4G11 0.34 RR42_RS01795 phosphoenolpyruvate-protein phosphotransferase 0.34 RR42_RS15940 lysine decarboxylase — —
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS02575 phosphoenolpyruvate-protein phosphotransferase 0.33 BPHYT_RS04980 lysine decarboxylase — —
Ralstonia solanacearum GMI1000 0.32 RS_RS01715 phosphoenolpyruvate--protein phosphotransferase 0.34 RS_RS11875 lysine decarboxylase — —
Herbaspirillum seropedicae SmR1 0.32 HSERO_RS00450 phosphoenolpyruvate-protein phosphotransferase 0.34 HSERO_RS17280 lysine decarboxylase — —
Paraburkholderia graminis OAS925 0.32 ABIE53_000660 phosphotransferase system enzyme I (PtsI) 0.33 ABIE53_001270 arginine decarboxylase — —
Paraburkholderia sabiae LMG 24235 0.32 QEN71_RS01430 phosphoenolpyruvate--protein phosphotransferase 0.34 QEN71_RS25000 arginine/lysine/ornithine decarboxylase — —
Ralstonia sp. UNC404CL21Col 0.32 ABZR87_RS06725 phosphoenolpyruvate--protein phosphotransferase 0.34 ABZR87_RS16180 arginine/lysine/ornithine decarboxylase low > 80
Ralstonia solanacearum IBSBF1503 0.32 RALBFv3_RS10875 phosphoenolpyruvate--protein phosphotransferase 0.34 RALBFv3_RS04325 lysine decarboxylase — —
Ralstonia solanacearum UW163 0.32 UW163_RS02705 phosphoenolpyruvate--protein phosphotransferase 0.34 UW163_RS09345 lysine decarboxylase — —
Ralstonia solanacearum PSI07 0.32 RPSI07_RS22435 phosphoenolpyruvate--protein phosphotransferase 0.34 RPSI07_RS13045 lysine decarboxylase — —
Dechlorosoma suillum PS 0.31 Dsui_0742 phosphoenolpyruvate-protein phosphotransferase 0.34 Dsui_1245 arginine/lysine/ornithine decarboxylase — —
Methylophilus sp. DMC18 0.31 GFF2263 Phosphoenolpyruvate-protein phosphotransferase 0.34 GFF1062 Biodegradative arginine decarboxylase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.31 GFF2931 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) 0.34 GFF4333 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) low > 90
Variovorax sp. OAS795 0.30 ABID97_RS00565 phosphoenolpyruvate--protein phosphotransferase 0.33 ABID97_RS16535 arginine/lysine/ornithine decarboxylase low > 91
Variovorax sp. SCN45 0.30 GFF3653 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) 0.33 GFF232 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) low > 127
Castellaniella sp019104865 MT123 0.30 ABCV34_RS04780 phosphoenolpyruvate--protein phosphotransferase 0.33 ABCV34_RS08900 arginine/lysine/ornithine decarboxylase — —
Acidovorax sp. GW101-3H11 0.30 Ac3H11_2115 Phosphoenolpyruvate-protein phosphotransferase of PTS system (EC 2.7.3.9) 0.33 Ac3H11_2914 Arginine decarboxylase (EC 4.1.1.19); Ornithine decarboxylase (EC 4.1.1.17); Lysine decarboxylase (EC 4.1.1.18) — —

Not shown: 24 genomes with orthologs for CSW01_04930 only; 22 genomes with orthologs for CSW01_01445 only