Conservation of cofitness between CSW01_11600 and CSW01_01045 in Vibrio cholerae E7946 ATCC 55056

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_11600 aminoacyl-histidine dipeptidase 1.0 CSW01_01045 DNA helicase RecQ 0.71 1
Shewanella loihica PV-4 0.64 Shew_2852 aminoacyl-histidine dipeptidase (RefSeq) 0.58 Shew_3474 ATP-dependent DNA helicase RecQ (RefSeq) low > 60
Enterobacter asburiae PDN3 0.64 EX28DRAFT_2656 Xaa-His dipeptidase 0.66 EX28DRAFT_4487 ATP-dependent DNA helicase RecQ low > 76
Escherichia coli Nissle 1917 0.64 ECOLIN_RS01800 cytosol nonspecific dipeptidase 0.67 ECOLIN_RS21935 ATP-dependent DNA helicase RecQ low > 55
Escherichia coli ECRC100 0.64 OKFHMN_09700 pepD cytosol nonspecific dipeptidase 0.67 OKFHMN_14360 recQ ATP-dependent DNA helicase RecQ low > 79
Escherichia coli ECRC102 0.64 NIAGMN_07560 pepD cytosol nonspecific dipeptidase 0.67 NIAGMN_12115 recQ ATP-dependent DNA helicase RecQ low > 80
Escherichia coli ECRC99 0.64 KEDOAH_18455 pepD cytosol nonspecific dipeptidase 0.67 KEDOAH_13790 recQ ATP-dependent DNA helicase RecQ — —
Escherichia coli ECRC98 0.64 JDDGAC_13325 pepD cytosol nonspecific dipeptidase 0.67 JDDGAC_17985 recQ ATP-dependent DNA helicase RecQ low > 87
Escherichia coli ECRC101 0.64 MCAODC_00220 pepD cytosol nonspecific dipeptidase 0.67 MCAODC_04865 recQ ATP-dependent DNA helicase RecQ low > 87
Escherichia coli ECOR38 0.64 HEPCGN_07805 pepD cytosol nonspecific dipeptidase 0.67 HEPCGN_13060 recQ ATP-dependent DNA helicase RecQ low > 88
Enterobacter sp. TBS_079 0.63 MPMX20_00922 Cytosol non-specific dipeptidase 0.66 MPMX20_04458 ATP-dependent DNA helicase RecQ low > 85
Escherichia coli ECRC62 0.63 BNILDI_00270 pepD cytosol nonspecific dipeptidase 0.67 BNILDI_05040 recQ ATP-dependent DNA helicase RecQ low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.63 OHPLBJKB_03403 Cytosol non-specific dipeptidase 0.67 OHPLBJKB_04229 ATP-dependent DNA helicase RecQ low > 74
Escherichia coli BL21 0.63 ECD_00232 aminoacyl-histidine dipeptidase (peptidase D) 0.66 ECD_03701 ATP-dependent DNA helicase low > 61
Escherichia coli ECOR27 0.63 NOLOHH_02075 pepD cytosol nonspecific dipeptidase 0.67 NOLOHH_06490 recQ ATP-dependent DNA helicase RecQ low > 76
Escherichia coli BW25113 0.63 b0237 pepD aminoacyl-histidine dipeptidase (peptidase D) (NCBI) 0.67 b3822 recQ ATP-dependent DNA helicase (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.63 GFF4108 Aminoacyl-histidine dipeptidase (Peptidase D) (EC 3.4.13.3) 0.65 GFF248 ATP-dependent DNA helicase RecQ low > 78
Escherichia fergusonii Becca 0.63 EFB2_03783 Cytosol non-specific dipeptidase 0.67 EFB2_04815 ATP-dependent DNA helicase RecQ low > 86
Klebsiella michiganensis M5al 0.63 BWI76_RS05540 cytosol nonspecific dipeptidase 0.66 BWI76_RS01245 DNA helicase RecQ low > 92
Serratia liquefaciens MT49 0.63 IAI46_04410 beta-Ala-His dipeptidase 0.66 IAI46_00770 ATP-dependent DNA helicase RecQ low > 87
Dickeya dianthicola 67-19 0.63 HGI48_RS16640 beta-Ala-His dipeptidase 0.66 HGI48_RS20005 ATP-dependent DNA helicase RecQ low > 71
Dickeya dianthicola ME23 0.63 DZA65_RS17730 beta-Ala-His dipeptidase 0.66 DZA65_RS21045 ATP-dependent DNA helicase RecQ low > 75
Dickeya dadantii 3937 0.63 DDA3937_RS16570 beta-Ala-His dipeptidase 0.66 DDA3937_RS19850 ATP-dependent DNA helicase RecQ low > 74
Erwinia amylovora T8 0.62 OLJFJH_18435 cytosol nonspecific dipeptidase 0.66 OLJFJH_06445 ATP-dependent DNA helicase RecQ low > 58
Shewanella amazonensis SB2B 0.62 Sama_2519 Xaa-His dipeptidase (RefSeq) 0.57 Sama_0333 ATP-dependent DNA helicase RecQ (RefSeq) low > 62
Pectobacterium carotovorum WPP14 0.62 HER17_RS04675 beta-Ala-His dipeptidase 0.65 HER17_RS01395 ATP-dependent DNA helicase RecQ low > 75
Klebsiella pneumoniae MKP103 0.61 KDGMDA_13800 cytosol nonspecific dipeptidase 0.67 KDGMDA_09735 ATP-dependent DNA helicase RecQ low > 95
Pantoea agglomerans CFBP13505 P0401 0.61 PagCFBP13505_RS10010 beta-Ala-His dipeptidase 0.66 PagCFBP13505_RS15340 ATP-dependent DNA helicase RecQ low > 74
Pantoea sp. MT58 0.61 IAI47_15145 beta-Ala-His dipeptidase 0.67 IAI47_18360 ATP-dependent DNA helicase RecQ low > 76
Rahnella sp. WP5 0.61 EX31_RS21000 beta-Ala-His dipeptidase 0.65 EX31_RS15210 ATP-dependent DNA helicase RecQ low > 89
Shewanella oneidensis MR-1 0.61 SO1115 pepD dipeptidase (EC 3.4.13.-) (from data) 0.58 SO4241 recQ ATP-dependent DNA helicase RecQ (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.60 Shewana3_0950 M20C family Xaa-His dipeptidase (RefSeq) 0.59 Shewana3_3763 ATP-dependent DNA helicase RecQ (RefSeq) low > 73
Erwinia tracheiphila SCR3 0.60 LU632_RS01155 pepD beta-Ala-His dipeptidase 0.66 LU632_RS24095 recQ ATP-dependent DNA helicase RecQ low > 73
Erwinia tracheiphila HP pepo 2.2 0.60 IJEDHG_15460 pepD cytosol nonspecific dipeptidase 0.66 IJEDHG_08740 recQ ATP-dependent DNA helicase RecQ low > 61
Bacteroides stercoris CC31F 0.46 HMPREF1181_RS09110 aminoacyl-histidine dipeptidase 0.40 HMPREF1181_RS14110 DNA helicase RecQ low > 56
Bacteroides thetaiotaomicron VPI-5482 0.46 BT1615 aminoacyl-histidine dipeptidase (NCBI ptt file) 0.39 BT1848 ATP-dependent DNA helicase recQ (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.46 BACOVA_04354 Xaa-His dipeptidase 0.38 BACOVA_04594 ATP-dependent DNA helicase RecQ low > 96
Phocaeicola vulgatus CL09T03C04 0.46 HMPREF1058_RS15925 aminoacyl-histidine dipeptidase 0.41 HMPREF1058_RS14585 DNA helicase RecQ low > 67
Phocaeicola dorei CL03T12C01 0.45 ABI39_RS11885 aminoacyl-histidine dipeptidase 0.41 ABI39_RS10235 DNA helicase RecQ low > 72
Parabacteroides merdae CL09T00C40 0.45 HMPREF1078_RS04870 aminoacyl-histidine dipeptidase 0.40 HMPREF1078_RS01195 DNA helicase RecQ low > 61
Cellulophaga baltica 18 0.43 M666_RS10985 aminoacyl-histidine dipeptidase 0.39 M666_RS16920 DNA helicase RecQ low > 67
Pontibacter actiniarum KMM 6156, DSM 19842 0.43 CA264_03200 aminoacyl-histidine dipeptidase 0.45 CA264_07560 DNA helicase RecQ low > 74
Dechlorosoma suillum PS 0.41 Dsui_2777 aminoacyl-histidine dipeptidase 0.42 Dsui_3092 ATP-dependent DNA helicase RecQ low > 51
Fusobacterium nucleatum SB010 0.31 HUW76_03860 aminoacyl-histidine dipeptidase 0.35 HUW76_07235 DNA helicase RecQ low > 35

Not shown: 1 genomes with orthologs for CSW01_11600 only; 70 genomes with orthologs for CSW01_01045 only